RNA–Protein interactions for RNA: ENST00000440346.1

PTPA-221, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-221ENST00000440346 ANKRD30AQ9BXX3 1397 aa10.82□□□□□ -0.68
PTPA-221ENST00000440346 FAM50AQ14320 339 aaKnown RBP10.82□□□□□ -0.68
PTPA-221ENST00000440346 ADGRB3O60242 1522 aa10.82□□□□□ -0.68
PTPA-221ENST00000440346 IDI1Q13907 227 aa10.81□□□□□ -0.68
PTPA-221ENST00000440346 EID1Q9Y6B2 187 aa10.81□□□□□ -0.68
PTPA-221ENST00000440346 NWD1Q149M9 1564 aa10.81□□□□□ -0.68
PTPA-221ENST00000440346 CHIC2Q9UKJ5 165 aa10.8□□□□□ -0.68
PTPA-221ENST00000440346 CHD2O14647 1828 aaKnown RBP10.79□□□□□ -0.68
PTPA-221ENST00000440346 ROCK1Q13464 1354 aa10.79□□□□□ -0.68
PTPA-221ENST00000440346 ROBO1Q9Y6N7 1651 aa10.79□□□□□ -0.68
PTPA-221ENST00000440346 FAM135BQ49AJ0 1406 aa10.78□□□□□ -0.68
PTPA-221ENST00000440346 RPRD2Q5VT52 1461 aaKnown RBP10.78□□□□□ -0.68
PTPA-221ENST00000440346 TMEM94Q12767 1356 aa10.77□□□□□ -0.68
PTPA-221ENST00000440346 NKTRP30414 1462 aaKnown RBP10.77□□□□□ -0.69
PTPA-221ENST00000440346 STAG3Q9UJ98 1225 aa10.77□□□□□ -0.69
PTPA-221ENST00000440346 UNC13BO14795 1591 aa10.77□□□□□ -0.69
PTPA-221ENST00000440346 TMEM131LA2VDJ0 1609 aa10.76□□□□□ -0.69
PTPA-221ENST00000440346 KCNA6P17658 529 aa10.76□□□□□ -0.69
PTPA-221ENST00000440346 SLC26A8Q96RN1 970 aa10.76□□□□□ -0.69
PTPA-221ENST00000440346 E9PCH4 1651 aa10.76□□□□□ -0.69
PTPA-221ENST00000440346 ZFYVE9O95405 1425 aa10.75□□□□□ -0.69
PTPA-221ENST00000440346 ANKRD50Q9ULJ7 1429 aa10.75□□□□□ -0.69
PTPA-221ENST00000440346 SLC52A1Q9NWF4 448 aa10.75□□□□□ -0.69
PTPA-221ENST00000440346 RGS17Q9UGC6 210 aaPredicted RBP10.75□□□□□ -0.69
PTPA-221ENST00000440346 HFM1A2PYH4 1435 aa10.73□□□□□ -0.69
PTPA-221ENST00000440346 IQGAP3Q86VI3 1631 aa10.73□□□□□ -0.69
PTPA-221ENST00000440346 PHLPP1O60346 1717 aa10.72□□□□□ -0.69
PTPA-221ENST00000440346 NCBP3Q53F19 620 aaKnown RBP10.72□□□□□ -0.69
PTPA-221ENST00000440346 PROSER2Q86WR7 435 aaPredicted RBP10.72□□□□□ -0.69
PTPA-221ENST00000440346 RBM33Q96EV2 1170 aaKnown RBP10.72□□□□□ -0.69
PTPA-221ENST00000440346 PLEKHG1Q9ULL1 1385 aa10.72□□□□□ -0.69
PTPA-221ENST00000440346 RIMS2Q9UQ26 1411 aa10.71□□□□□ -0.69
PTPA-221ENST00000440346 NAIPQ13075 1403 aa10.7□□□□□ -0.7
PTPA-221ENST00000440346 ITGAEP38570 1179 aa10.7□□□□□ -0.7
PTPA-221ENST00000440346 C1QBPQ07021 282 aaKnown RBP10.7□□□□□ -0.7
PTPA-221ENST00000440346 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.7□□□□□ -0.7
PTPA-221ENST00000440346 COL16A1Q07092 1604 aaPredicted RBP10.69□□□□□ -0.7
PTPA-221ENST00000440346 MSH6P52701 1360 aa10.69□□□□□ -0.7
PTPA-221ENST00000440346 TRIM26Q12899 539 aaPredicted RBP10.69□□□□□ -0.7
PTPA-221ENST00000440346 DIP2AQ14689 1571 aa10.69□□□□□ -0.7
PTPA-221ENST00000440346 ADAMTS13Q76LX8 1427 aa10.68□□□□□ -0.7
PTPA-221ENST00000440346 ACIN1Q9UKV3 1341 aaKnown RBP10.68□□□□□ -0.7
PTPA-221ENST00000440346 POTEAQ6S8J7 498 aa10.67□□□□□ -0.7
PTPA-221ENST00000440346 BCANQ96GW7 911 aa10.67□□□□□ -0.7
PTPA-221ENST00000440346 SLAIN2Q9P270 581 aa10.67□□□□□ -0.7
PTPA-221ENST00000440346 TBX22Q9Y458 520 aa10.67□□□□□ -0.7
PTPA-221ENST00000440346 SETD1AO15047 1707 aaKnown RBP10.67□□□□□ -0.7
PTPA-221ENST00000440346 SPHKAPQ2M3C7 1700 aa10.67□□□□□ -0.7
PTPA-221ENST00000440346 NCOA3Q9Y6Q9 1424 aa10.67□□□□□ -0.7
PTPA-221ENST00000440346 NRXN3Q9Y4C0 1643 aa10.66□□□□□ -0.7
PTPA-221ENST00000440346 PPP1R15AO75807 674 aaPredicted RBP10.65□□□□□ -0.7
PTPA-221ENST00000440346 HDGFP51858 240 aaKnown RBP10.65□□□□□ -0.7
PTPA-221ENST00000440346 SHPRHQ149N8 1683 aa10.65□□□□□ -0.7
PTPA-221ENST00000440346 SETD5Q9C0A6 1442 aa10.65□□□□□ -0.7
PTPA-221ENST00000440346 AHDC1Q5TGY3 1603 aaPredicted RBP10.65□□□□□ -0.7
PTPA-221ENST00000440346 PIK3R4Q99570 1358 aa10.65□□□□□ -0.71
PTPA-221ENST00000440346 JCADQ9P266 1359 aa10.65□□□□□ -0.71
PTPA-221ENST00000440346 XRN1Q8IZH2 1706 aaKnown RBP10.64□□□□□ -0.71
PTPA-221ENST00000440346 TRPM2O94759 1503 aa10.64□□□□□ -0.71
PTPA-221ENST00000440346 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.64□□□□□ -0.71
PTPA-221ENST00000440346 LRP6O75581 1613 aa10.63□□□□□ -0.71
PTPA-221ENST00000440346 NUTM2DQ5VT03 806 aaPredicted RBP10.63□□□□□ -0.71
PTPA-221ENST00000440346 PTPRUQ92729 1446 aa10.63□□□□□ -0.71
PTPA-221ENST00000440346 SETBP1Q9Y6X0 1596 aa10.62□□□□□ -0.71
PTPA-221ENST00000440346 CHGAP10645 457 aaKnown RBP10.62□□□□□ -0.71
PTPA-221ENST00000440346 HRCP23327 699 aa10.62□□□□□ -0.71
PTPA-221ENST00000440346 NUP155O75694 1391 aa10.62□□□□□ -0.71
PTPA-221ENST00000440346 NHSL1Q5SYE7 1610 aa10.6□□□□□ -0.71
PTPA-221ENST00000440346 C19orf44Q9H6X5 657 aa10.6□□□□□ -0.71
PTPA-221ENST00000440346 RAB3GAP2Q9H2M9 1393 aa10.6□□□□□ -0.71
PTPA-221ENST00000440346 CLTCL1P53675 1640 aa10.59□□□□□ -0.71
PTPA-221ENST00000440346 KIF1BO60333 1816 aa10.59□□□□□ -0.71
PTPA-221ENST00000440346 CADPS2Q86UW7 1296 aa10.59□□□□□ -0.71
PTPA-221ENST00000440346 SPATA31A6Q5VVP1 1343 aa10.58□□□□□ -0.71
PTPA-221ENST00000440346 DCCP43146 1447 aa10.58□□□□□ -0.72
PTPA-221ENST00000440346 NALCNQ8IZF0 1738 aa10.58□□□□□ -0.72
PTPA-221ENST00000440346 C14orf37Q86TY3 774 aa10.58□□□□□ -0.72
PTPA-221ENST00000440346 AMOTL2Q9Y2J4 779 aa10.58□□□□□ -0.72
PTPA-221ENST00000440346 NEXMIFQ5QGS0 1516 aa10.58□□□□□ -0.72
PTPA-221ENST00000440346 ATF3P18847 181 aa10.57□□□□□ -0.72
PTPA-221ENST00000440346 ASXL1Q8IXJ9 1541 aa10.57□□□□□ -0.72
PTPA-221ENST00000440346 BRINP3Q76B58 766 aa10.56□□□□□ -0.72
PTPA-221ENST00000440346 MST1RQ04912 1400 aa10.56□□□□□ -0.72
PTPA-221ENST00000440346 METP08581 1390 aa10.55□□□□□ -0.72
PTPA-221ENST00000440346 ADGRL3Q9HAR2 1447 aa10.54□□□□□ -0.72
PTPA-221ENST00000440346 LAMC1P11047 1609 aa10.54□□□□□ -0.72
PTPA-221ENST00000440346 ZNF772Q68DY9 489 aaPredicted RBP10.53□□□□□ -0.72
PTPA-221ENST00000440346 PPLO60437 1756 aa10.52□□□□□ -0.72
PTPA-221ENST00000440346 NPM3O75607 178 aaKnown RBP10.52□□□□□ -0.73
PTPA-221ENST00000440346 MEX3CQ5U5Q3 659 aaKnown RBP10.52□□□□□ -0.73
PTPA-221ENST00000440346 TRIM52Q96A61 297 aa10.52□□□□□ -0.73
PTPA-221ENST00000440346 ZNF326Q5BKZ1 582 aaKnown RBP10.51□□□□□ -0.73
PTPA-221ENST00000440346 PCGF6Q9BYE7 350 aa10.51□□□□□ -0.73
PTPA-221ENST00000440346 CDK12Q9NYV4 1490 aaPredicted RBP10.5□□□□□ -0.73
PTPA-221ENST00000440346 SLC4A1APQ9BWU0 796 aaKnown RBP10.5□□□□□ -0.73
PTPA-221ENST00000440346 PTCH1Q13635 1447 aa10.5□□□□□ -0.73
PTPA-221ENST00000440346 PRAG1Q86YV5 1406 aa10.5□□□□□ -0.73
PTPA-221ENST00000440346 NUTM2BA6NNL0 878 aaPredicted RBP10.49□□□□□ -0.73
PTPA-221ENST00000440346 NUTM2EB1AL46 878 aaPredicted RBP10.49□□□□□ -0.73
PTPA-221ENST00000440346 NUTM2AQ8IVF1 878 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms