RNA–Protein interactions for RNA: ENST00000439830.5

ANKRD28-203, Transcript of ankyrin repeat domain 28, humanhuman

TSL 5

Gene ANKRD28, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-203ENST00000439830 NWD1Q149M9 1564 aa38.48■■■■□ 3.75
ANKRD28-203ENST00000439830 RIMS2Q9UQ26 1411 aa38.46■■■■□ 3.75
ANKRD28-203ENST00000439830 SLC26A8Q96RN1 970 aa38.45■■■■□ 3.75
ANKRD28-203ENST00000439830 SPHKAPQ2M3C7 1700 aa38.45■■■■□ 3.75
ANKRD28-203ENST00000439830 ILDR2Q71H61 639 aa38.42■■■■□ 3.74
ANKRD28-203ENST00000439830 PLEKHG1Q9ULL1 1385 aa38.42■■■■□ 3.74
ANKRD28-203ENST00000439830 NKTRP30414 1462 aaKnown RBP38.41■■■■□ 3.74
ANKRD28-203ENST00000439830 CHD2O14647 1828 aaKnown RBP38.41■■■■□ 3.74
ANKRD28-203ENST00000439830 KCNA6P17658 529 aa38.41■■■■□ 3.74
ANKRD28-203ENST00000439830 BCANQ96GW7 911 aa38.4■■■■□ 3.74
ANKRD28-203ENST00000439830 PPP1R15AO75807 674 aaPredicted RBP38.39■■■■□ 3.74
ANKRD28-203ENST00000439830 HDGFP51858 240 aaKnown RBP38.39■■■■□ 3.74
ANKRD28-203ENST00000439830 MED1Q15648 1581 aaPredicted RBP38.38■■■■□ 3.73
ANKRD28-203ENST00000439830 CHGAP10645 457 aaKnown RBP38.37■■■■□ 3.73
ANKRD28-203ENST00000439830 TMEM94Q12767 1356 aa38.36■■■■□ 3.73
ANKRD28-203ENST00000439830 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.31■■■■□ 3.72
ANKRD28-203ENST00000439830 SENP3Q9H4L4 574 aaPredicted RBP38.3■■■■□ 3.72
ANKRD28-203ENST00000439830 DIP2AQ14689 1571 aa38.3■■■■□ 3.72
ANKRD28-203ENST00000439830 NAIPQ13075 1403 aa38.29■■■■□ 3.72
ANKRD28-203ENST00000439830 PROSER2Q86WR7 435 aaPredicted RBP38.28■■■■□ 3.72
ANKRD28-203ENST00000439830 ADAMTS13Q76LX8 1427 aa38.21■■■■□ 3.71
ANKRD28-203ENST00000439830 ROBO1Q9Y6N7 1651 aa38.2■■■■□ 3.71
ANKRD28-203ENST00000439830 NUTM2DQ5VT03 806 aaPredicted RBP38.2■■■■□ 3.71
ANKRD28-203ENST00000439830 RBM33Q96EV2 1170 aaKnown RBP38.2■■■■□ 3.71
ANKRD28-203ENST00000439830 TBX22Q9Y458 520 aa38.2■■■■□ 3.71
ANKRD28-203ENST00000439830 KIF1BO60333 1816 aa38.19■■■■□ 3.7
ANKRD28-203ENST00000439830 CLTCL1P53675 1640 aa38.19■■■■□ 3.7
ANKRD28-203ENST00000439830 TRPM2O94759 1503 aa38.18■■■■□ 3.7
ANKRD28-203ENST00000439830 HFM1A2PYH4 1435 aa38.18■■■■□ 3.7
ANKRD28-203ENST00000439830 FAM135BQ49AJ0 1406 aa38.18■■■■□ 3.7
ANKRD28-203ENST00000439830 SOCS7O14512 581 aa38.17■■■■□ 3.7
ANKRD28-203ENST00000439830 MSH6P52701 1360 aa38.17■■■■□ 3.7
ANKRD28-203ENST00000439830 PIK3R4Q99570 1358 aa38.13■■■■□ 3.69
ANKRD28-203ENST00000439830 NRXN3Q9Y4C0 1643 aa38.12■■■■□ 3.69
ANKRD28-203ENST00000439830 SETBP1Q9Y6X0 1596 aa38.1■■■■□ 3.69
ANKRD28-203ENST00000439830 NCOA3Q9Y6Q9 1424 aa38.06■■■■□ 3.68
ANKRD28-203ENST00000439830 ZNF326Q5BKZ1 582 aaKnown RBP38.05■■■■□ 3.68
ANKRD28-203ENST00000439830 NEXMIFQ5QGS0 1516 aa38.04■■■■□ 3.68
ANKRD28-203ENST00000439830 XRN1Q8IZH2 1706 aaKnown RBP38.03■■■■□ 3.68
ANKRD28-203ENST00000439830 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.03■■■■□ 3.68
ANKRD28-203ENST00000439830 TRIM52Q96A61 297 aa38.02■■■■□ 3.68
ANKRD28-203ENST00000439830 PHF23Q9BUL5 403 aaPredicted RBP38.02■■■■□ 3.68
ANKRD28-203ENST00000439830 PHLPP1O60346 1717 aa38■■■■□ 3.67
ANKRD28-203ENST00000439830 PTPRUQ92729 1446 aa37.97■■■■□ 3.67
ANKRD28-203ENST00000439830 C14orf37Q86TY3 774 aa37.97■■■■□ 3.67
ANKRD28-203ENST00000439830 SLAIN2Q9P270 581 aa37.97■■■■□ 3.67
ANKRD28-203ENST00000439830 AMOTL2Q9Y2J4 779 aa37.94■■■■□ 3.66
ANKRD28-203ENST00000439830 SLC4A1APQ9BWU0 796 aaKnown RBP37.92■■■■□ 3.66
ANKRD28-203ENST00000439830 PPLO60437 1756 aa37.88■■■■□ 3.65
ANKRD28-203ENST00000439830 C19orf44Q9H6X5 657 aa37.87■■■■□ 3.65
ANKRD28-203ENST00000439830 CADPS2Q86UW7 1296 aa37.86■■■■□ 3.65
ANKRD28-203ENST00000439830 METP08581 1390 aa37.85■■■■□ 3.65
ANKRD28-203ENST00000439830 SETD1AO15047 1707 aaKnown RBP37.85■■■■□ 3.65
ANKRD28-203ENST00000439830 COL16A1Q07092 1604 aaPredicted RBP37.85■■■■□ 3.65
ANKRD28-203ENST00000439830 ATF3P18847 181 aa37.84■■■■□ 3.65
ANKRD28-203ENST00000439830 DCCP43146 1447 aa37.82■■■■□ 3.64
ANKRD28-203ENST00000439830 AHDC1Q5TGY3 1603 aaPredicted RBP37.79■■■■□ 3.64
ANKRD28-203ENST00000439830 NALCNQ8IZF0 1738 aa37.78■■■■□ 3.64
ANKRD28-203ENST00000439830 VGFO15240 615 aaPredicted RBP37.75■■■■□ 3.63
ANKRD28-203ENST00000439830 RPGRIP1LQ68CZ1 1315 aa37.74■■■■□ 3.63
ANKRD28-203ENST00000439830 JCADQ9P266 1359 aa37.74■■■■□ 3.63
ANKRD28-203ENST00000439830 CCDC144AA2RUR9 1427 aa37.7■■■■□ 3.63
ANKRD28-203ENST00000439830 ADGRL3Q9HAR2 1447 aa37.7■■■■□ 3.63
ANKRD28-203ENST00000439830 FOXD1Q16676 465 aa37.7■■■■□ 3.63
ANKRD28-203ENST00000439830 IFT172Q9UG01 1749 aa37.7■■■■□ 3.63
ANKRD28-203ENST00000439830 SHPRHQ149N8 1683 aa37.69■■■■□ 3.62
ANKRD28-203ENST00000439830 RGS17Q9UGC6 210 aaPredicted RBP37.68■■■■□ 3.62
ANKRD28-203ENST00000439830 PTCH1Q13635 1447 aa37.67■■■■□ 3.62
ANKRD28-203ENST00000439830 ASXL1Q8IXJ9 1541 aa37.66■■■■□ 3.62
ANKRD28-203ENST00000439830 MST1RQ04912 1400 aa37.66■■■■□ 3.62
ANKRD28-203ENST00000439830 NHSL1Q5SYE7 1610 aa37.65■■■■□ 3.62
ANKRD28-203ENST00000439830 MPHOSPH9Q99550 1183 aa37.64■■■■□ 3.62
ANKRD28-203ENST00000439830 BRINP3Q76B58 766 aa37.63■■■■□ 3.61
ANKRD28-203ENST00000439830 PRAG1Q86YV5 1406 aa37.61■■■■□ 3.61
ANKRD28-203ENST00000439830 ACIN1Q9UKV3 1341 aaKnown RBP37.6■■■■□ 3.61
ANKRD28-203ENST00000439830 SPATA31E1Q6ZUB1 1445 aa37.59■■■■□ 3.61
ANKRD28-203ENST00000439830 SETD5Q9C0A6 1442 aa37.58■■■■□ 3.61
ANKRD28-203ENST00000439830 SPATA31A6Q5VVP1 1343 aa37.56■■■■□ 3.6
ANKRD28-203ENST00000439830 ROBO2Q9HCK4 1378 aa37.55■■■■□ 3.6
ANKRD28-203ENST00000439830 LRP6O75581 1613 aa37.54■■■■□ 3.6
ANKRD28-203ENST00000439830 ANKRD30BQ9BXX2 1392 aa37.51■■■■□ 3.59
ANKRD28-203ENST00000439830 RGL3Q3MIN7 710 aa37.49■■■■□ 3.59
ANKRD28-203ENST00000439830 ADGRF5Q8IZF2 1346 aa37.48■■■■□ 3.59
ANKRD28-203ENST00000439830 POTEAQ6S8J7 498 aa37.48■■■■□ 3.59
ANKRD28-203ENST00000439830 KNDC1Q76NI1 1749 aa37.47■■■■□ 3.59
ANKRD28-203ENST00000439830 C1orf167Q5SNV9 1468 aa37.45■■■■□ 3.59
ANKRD28-203ENST00000439830 LAMC1P11047 1609 aa37.45■■■■□ 3.59
ANKRD28-203ENST00000439830 RAB3GAP2Q9H2M9 1393 aa37.43■■■■□ 3.58
ANKRD28-203ENST00000439830 MEX3CQ5U5Q3 659 aaKnown RBP37.42■■■■□ 3.58
ANKRD28-203ENST00000439830 PIK3C2GO75747 1445 aa37.42■■■■□ 3.58
ANKRD28-203ENST00000439830 CDC42BPGQ6DT37 1551 aa37.42■■■■□ 3.58
ANKRD28-203ENST00000439830 TECPR2O15040 1411 aa37.38■■■■□ 3.57
ANKRD28-203ENST00000439830 LRRC59Q96AG4 307 aaKnown RBP37.35■■■■□ 3.57
ANKRD28-203ENST00000439830 LRPPRCP42704 1394 aaKnown RBP37.34■■■■□ 3.57
ANKRD28-203ENST00000439830 DDX17Q92841 729 aaKnown RBP37.34■■■■□ 3.57
ANKRD28-203ENST00000439830 MYOM2P54296 1465 aa37.32■■■■□ 3.56
ANKRD28-203ENST00000439830 NUTM2BA6NNL0 878 aaPredicted RBP37.3■■■■□ 3.56
ANKRD28-203ENST00000439830 NUTM2EB1AL46 878 aaPredicted RBP37.3■■■■□ 3.56
ANKRD28-203ENST00000439830 NUTM2AQ8IVF1 878 aaPredicted RBP37.3■■■■□ 3.56
ANKRD28-203ENST00000439830 PNPLA6Q8IY17 1366 aa37.29■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms