RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 E9PCH4 1651 aa28.41■■■□□ 2.14
CCDC78-204ENST00000439619 STRCP1A6NGW2 1772 aa28.39■■■□□ 2.14
CCDC78-204ENST00000439619 HSPA1LP34931 641 aa28.39■■■□□ 2.14
CCDC78-204ENST00000439619 PLEKHG1Q9ULL1 1385 aa28.38■■■□□ 2.13
CCDC78-204ENST00000439619 ZFYVE9O95405 1425 aa28.37■■■□□ 2.13
CCDC78-204ENST00000439619 TMEM131LA2VDJ0 1609 aa28.36■■■□□ 2.13
CCDC78-204ENST00000439619 PROSER2Q86WR7 435 aaPredicted RBP28.35■■■□□ 2.13
CCDC78-204ENST00000439619 NAIPQ13075 1403 aa28.34■■■□□ 2.13
CCDC78-204ENST00000439619 SENP3Q9H4L4 574 aaPredicted RBP28.32■■■□□ 2.12
CCDC78-204ENST00000439619 TMEM94Q12767 1356 aa28.32■■■□□ 2.12
CCDC78-204ENST00000439619 TBX22Q9Y458 520 aa28.3■■■□□ 2.12
CCDC78-204ENST00000439619 NKTRP30414 1462 aaKnown RBP28.29■■■□□ 2.12
CCDC78-204ENST00000439619 TRIM52Q96A61 297 aa28.29■■■□□ 2.12
CCDC78-204ENST00000439619 HFM1A2PYH4 1435 aa28.28■■■□□ 2.12
CCDC78-204ENST00000439619 ALKQ9UM73 1620 aa28.27■■■□□ 2.12
CCDC78-204ENST00000439619 ZNF326Q5BKZ1 582 aaKnown RBP28.26■■■□□ 2.11
CCDC78-204ENST00000439619 NUTM2DQ5VT03 806 aaPredicted RBP28.26■■■□□ 2.11
CCDC78-204ENST00000439619 NWD1Q149M9 1564 aa28.24■■■□□ 2.11
CCDC78-204ENST00000439619 MYO5BQ9ULV0 1848 aa28.23■■■□□ 2.11
CCDC78-204ENST00000439619 MSH6P52701 1360 aa28.23■■■□□ 2.11
CCDC78-204ENST00000439619 PIK3R4Q99570 1358 aa28.21■■■□□ 2.11
CCDC78-204ENST00000439619 SPHKAPQ2M3C7 1700 aa28.21■■■□□ 2.11
CCDC78-204ENST00000439619 RBM33Q96EV2 1170 aaKnown RBP28.2■■■□□ 2.1
CCDC78-204ENST00000439619 DIP2AQ14689 1571 aa28.2■■■□□ 2.1
CCDC78-204ENST00000439619 SLC4A1APQ9BWU0 796 aaKnown RBP28.19■■■□□ 2.1
CCDC78-204ENST00000439619 C14orf37Q86TY3 774 aa28.17■■■□□ 2.1
CCDC78-204ENST00000439619 FAM135BQ49AJ0 1406 aa28.17■■■□□ 2.1
CCDC78-204ENST00000439619 ADAMTS13Q76LX8 1427 aa28.17■■■□□ 2.1
CCDC78-204ENST00000439619 ILDR2Q71H61 639 aa28.16■■■□□ 2.1
CCDC78-204ENST00000439619 TRPM2O94759 1503 aa28.16■■■□□ 2.1
CCDC78-204ENST00000439619 XIRP1Q702N8 1843 aaKnown RBP28.15■■■□□ 2.1
CCDC78-204ENST00000439619 NCOA3Q9Y6Q9 1424 aa28.14■■■□□ 2.1
CCDC78-204ENST00000439619 PHF23Q9BUL5 403 aaPredicted RBP28.1■■■□□ 2.09
CCDC78-204ENST00000439619 CHD2O14647 1828 aaKnown RBP28.1■■■□□ 2.09
CCDC78-204ENST00000439619 MED1Q15648 1581 aaPredicted RBP28.09■■■□□ 2.09
CCDC78-204ENST00000439619 SLAIN2Q9P270 581 aa28.09■■■□□ 2.09
CCDC78-204ENST00000439619 AMOTL2Q9Y2J4 779 aa28.09■■■□□ 2.09
CCDC78-204ENST00000439619 ACIN1Q9UKV3 1341 aaKnown RBP28.09■■■□□ 2.09
CCDC78-204ENST00000439619 CLTCL1P53675 1640 aa28.07■■■□□ 2.08
CCDC78-204ENST00000439619 SOCS7O14512 581 aa28.05■■■□□ 2.08
CCDC78-204ENST00000439619 VGFO15240 615 aaPredicted RBP28.05■■■□□ 2.08
CCDC78-204ENST00000439619 ATF3P18847 181 aa28.05■■■□□ 2.08
CCDC78-204ENST00000439619 CADPS2Q86UW7 1296 aa28.05■■■□□ 2.08
CCDC78-204ENST00000439619 C19orf44Q9H6X5 657 aa28.05■■■□□ 2.08
CCDC78-204ENST00000439619 SETBP1Q9Y6X0 1596 aa28.05■■■□□ 2.08
CCDC78-204ENST00000439619 RPGRIP1LQ68CZ1 1315 aa28.02■■■□□ 2.08
CCDC78-204ENST00000439619 NEXMIFQ5QGS0 1516 aa28■■■□□ 2.07
CCDC78-204ENST00000439619 ROBO1Q9Y6N7 1651 aa28■■■□□ 2.07
CCDC78-204ENST00000439619 KIF1BO60333 1816 aa27.99■■■□□ 2.07
CCDC78-204ENST00000439619 PTPRUQ92729 1446 aa27.98■■■□□ 2.07
CCDC78-204ENST00000439619 MPHOSPH9Q99550 1183 aa27.97■■■□□ 2.07
CCDC78-204ENST00000439619 METP08581 1390 aa27.96■■■□□ 2.07
CCDC78-204ENST00000439619 CCDC144AA2RUR9 1427 aa27.95■■■□□ 2.07
CCDC78-204ENST00000439619 NRXN3Q9Y4C0 1643 aa27.95■■■□□ 2.06
CCDC78-204ENST00000439619 FOXD1Q16676 465 aa27.94■■■□□ 2.06
CCDC78-204ENST00000439619 DCCP43146 1447 aa27.91■■■□□ 2.06
CCDC78-204ENST00000439619 SETD5Q9C0A6 1442 aa27.91■■■□□ 2.06
CCDC78-204ENST00000439619 XRN1Q8IZH2 1706 aaKnown RBP27.89■■■□□ 2.05
CCDC78-204ENST00000439619 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.88■■■□□ 2.05
CCDC78-204ENST00000439619 JCADQ9P266 1359 aa27.86■■■□□ 2.05
CCDC78-204ENST00000439619 RGL3Q3MIN7 710 aa27.85■■■□□ 2.05
CCDC78-204ENST00000439619 PHLPP1O60346 1717 aa27.84■■■□□ 2.05
CCDC78-204ENST00000439619 ANKRD30BQ9BXX2 1392 aa27.82■■■□□ 2.04
CCDC78-204ENST00000439619 ADGRL3Q9HAR2 1447 aa27.82■■■□□ 2.04
CCDC78-204ENST00000439619 BRINP3Q76B58 766 aa27.8■■■□□ 2.04
CCDC78-204ENST00000439619 PTCH1Q13635 1447 aa27.8■■■□□ 2.04
CCDC78-204ENST00000439619 RAB3GAP2Q9H2M9 1393 aa27.78■■■□□ 2.04
CCDC78-204ENST00000439619 SPATA31E1Q6ZUB1 1445 aa27.77■■■□□ 2.04
CCDC78-204ENST00000439619 PPLO60437 1756 aa27.76■■■□□ 2.03
CCDC78-204ENST00000439619 SPATA31A6Q5VVP1 1343 aa27.76■■■□□ 2.03
CCDC78-204ENST00000439619 AHDC1Q5TGY3 1603 aaPredicted RBP27.76■■■□□ 2.03
CCDC78-204ENST00000439619 MST1RQ04912 1400 aa27.75■■■□□ 2.03
CCDC78-204ENST00000439619 ADGRF5Q8IZF2 1346 aa27.74■■■□□ 2.03
CCDC78-204ENST00000439619 COL16A1Q07092 1604 aaPredicted RBP27.74■■■□□ 2.03
CCDC78-204ENST00000439619 ROBO2Q9HCK4 1378 aa27.73■■■□□ 2.03
CCDC78-204ENST00000439619 PRAG1Q86YV5 1406 aa27.73■■■□□ 2.03
CCDC78-204ENST00000439619 RGS17Q9UGC6 210 aaPredicted RBP27.71■■■□□ 2.03
CCDC78-204ENST00000439619 ASXL1Q8IXJ9 1541 aa27.71■■■□□ 2.03
CCDC78-204ENST00000439619 MEX3CQ5U5Q3 659 aaKnown RBP27.7■■■□□ 2.02
CCDC78-204ENST00000439619 SETD1AO15047 1707 aaKnown RBP27.69■■■□□ 2.02
CCDC78-204ENST00000439619 LRRC59Q96AG4 307 aaKnown RBP27.68■■■□□ 2.02
CCDC78-204ENST00000439619 HRCP23327 699 aa27.66■■■□□ 2.02
CCDC78-204ENST00000439619 STK26Q9P289 416 aa27.66■■■□□ 2.02
CCDC78-204ENST00000439619 NALCNQ8IZF0 1738 aa27.66■■■□□ 2.02
CCDC78-204ENST00000439619 PIK3C2GO75747 1445 aa27.64■■■□□ 2.02
CCDC78-204ENST00000439619 C1orf167Q5SNV9 1468 aa27.64■■■□□ 2.01
CCDC78-204ENST00000439619 LRPPRCP42704 1394 aaKnown RBP27.62■■■□□ 2.01
CCDC78-204ENST00000439619 ABCC11Q96J66 1382 aa27.6■■■□□ 2.01
CCDC78-204ENST00000439619 TMEM132EQ6IEE7 984 aa27.6■■■□□ 2.01
CCDC78-204ENST00000439619 TECPR2O15040 1411 aa27.59■■■□□ 2.01
CCDC78-204ENST00000439619 SHPRHQ149N8 1683 aa27.59■■■□□ 2.01
CCDC78-204ENST00000439619 IFT172Q9UG01 1749 aa27.59■■■□□ 2.01
CCDC78-204ENST00000439619 NUTM2BA6NNL0 878 aaPredicted RBP27.59■■■□□ 2.01
CCDC78-204ENST00000439619 NUTM2EB1AL46 878 aaPredicted RBP27.59■■■□□ 2.01
CCDC78-204ENST00000439619 POTEAQ6S8J7 498 aa27.59■■■□□ 2.01
CCDC78-204ENST00000439619 NUTM2AQ8IVF1 878 aaPredicted RBP27.59■■■□□ 2.01
CCDC78-204ENST00000439619 ZNF772Q68DY9 489 aaPredicted RBP27.58■■■□□ 2.01
CCDC78-204ENST00000439619 C14orf93Q9H972 538 aaKnown RBP27.58■■■□□ 2.01
CCDC78-204ENST00000439619 NHSL1Q5SYE7 1610 aa27.57■■■□□ 2
CCDC78-204ENST00000439619 MYOM2P54296 1465 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms