RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 SLAIN2Q9P270 581 aa17.62■□□□□ 0.41
IRF1-204ENST00000439555 STAG3Q9UJ98 1225 aa17.62■□□□□ 0.41
IRF1-204ENST00000439555 ROCK1Q13464 1354 aa17.61■□□□□ 0.41
IRF1-204ENST00000439555 IDI1Q13907 227 aa17.6■□□□□ 0.41
IRF1-204ENST00000439555 MSH6P52701 1360 aa17.6■□□□□ 0.41
IRF1-204ENST00000439555 SLC52A1Q9NWF4 448 aa17.59■□□□□ 0.41
IRF1-204ENST00000439555 UPF1Q92900 1129 aaKnown RBP eCLIP17.58■□□□□ 0.4
IRF1-204ENST00000439555 COL16A1Q07092 1604 aaPredicted RBP17.58■□□□□ 0.4
IRF1-204ENST00000439555 NOS1P29475 1434 aa17.57■□□□□ 0.4
IRF1-204ENST00000439555 NCOA3Q9Y6Q9 1424 aa17.57■□□□□ 0.4
IRF1-204ENST00000439555 SPATA31A6Q5VVP1 1343 aa17.57■□□□□ 0.4
IRF1-204ENST00000439555 ZNF772Q68DY9 489 aaPredicted RBP17.57■□□□□ 0.4
IRF1-204ENST00000439555 SLC26A8Q96RN1 970 aa17.57■□□□□ 0.4
IRF1-204ENST00000439555 RPRD2Q5VT52 1461 aaKnown RBP17.56■□□□□ 0.4
IRF1-204ENST00000439555 SHPRHQ149N8 1683 aa17.54■□□□□ 0.4
IRF1-204ENST00000439555 HDGFP51858 240 aaKnown RBP17.52■□□□□ 0.4
IRF1-204ENST00000439555 RBM33Q96EV2 1170 aaKnown RBP17.52■□□□□ 0.4
IRF1-204ENST00000439555 ADGRB3O60242 1522 aa17.52■□□□□ 0.39
IRF1-204ENST00000439555 MYO5BQ9ULV0 1848 aa17.51■□□□□ 0.39
IRF1-204ENST00000439555 CDK12Q9NYV4 1490 aaPredicted RBP17.5■□□□□ 0.39
IRF1-204ENST00000439555 LRP6O75581 1613 aa17.49■□□□□ 0.39
IRF1-204ENST00000439555 AHDC1Q5TGY3 1603 aaPredicted RBP17.49■□□□□ 0.39
IRF1-204ENST00000439555 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.48■□□□□ 0.39
IRF1-204ENST00000439555 PPARGC1BQ86YN6 1023 aaKnown RBP17.48■□□□□ 0.39
IRF1-204ENST00000439555 TBX22Q9Y458 520 aa17.48■□□□□ 0.39
IRF1-204ENST00000439555 PLEKHG1Q9ULL1 1385 aa17.48■□□□□ 0.39
IRF1-204ENST00000439555 RXRBP28702 533 aa17.47■□□□□ 0.39
IRF1-204ENST00000439555 ITGAEP38570 1179 aa17.46■□□□□ 0.39
IRF1-204ENST00000439555 MEX3CQ5U5Q3 659 aaKnown RBP17.46■□□□□ 0.39
IRF1-204ENST00000439555 CADPS2Q86UW7 1296 aa17.46■□□□□ 0.39
IRF1-204ENST00000439555 BCANQ96GW7 911 aa17.46■□□□□ 0.39
IRF1-204ENST00000439555 ZFYVE9O95405 1425 aa17.46■□□□□ 0.39
IRF1-204ENST00000439555 RRBP1Q9P2E9 1410 aaKnown RBP17.46■□□□□ 0.39
IRF1-204ENST00000439555 NUP155O75694 1391 aa17.45■□□□□ 0.38
IRF1-204ENST00000439555 C19orf44Q9H6X5 657 aa17.45■□□□□ 0.38
IRF1-204ENST00000439555 UNC13BO14795 1591 aa17.45■□□□□ 0.38
IRF1-204ENST00000439555 TRIM52Q96A61 297 aa17.44■□□□□ 0.38
IRF1-204ENST00000439555 PIK3R4Q99570 1358 aa17.43■□□□□ 0.38
IRF1-204ENST00000439555 TMEM131LA2VDJ0 1609 aa17.43■□□□□ 0.38
IRF1-204ENST00000439555 GCC2Q8IWJ2 1684 aa17.42■□□□□ 0.38
IRF1-204ENST00000439555 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.41■□□□□ 0.38
IRF1-204ENST00000439555 DIP2AQ14689 1571 aa17.4■□□□□ 0.38
IRF1-204ENST00000439555 ATF3P18847 181 aa17.4■□□□□ 0.38
IRF1-204ENST00000439555 RIMS2Q9UQ26 1411 aa17.39■□□□□ 0.38
IRF1-204ENST00000439555 IQGAP3Q86VI3 1631 aa17.38■□□□□ 0.37
IRF1-204ENST00000439555 PPP1R15AO75807 674 aaPredicted RBP17.37■□□□□ 0.37
IRF1-204ENST00000439555 C14orf37Q86TY3 774 aa17.37■□□□□ 0.37
IRF1-204ENST00000439555 SETD5Q9C0A6 1442 aa17.36■□□□□ 0.37
IRF1-204ENST00000439555 BRINP3Q76B58 766 aa17.35■□□□□ 0.37
IRF1-204ENST00000439555 DCCP43146 1447 aa17.35■□□□□ 0.37
IRF1-204ENST00000439555 ADAMTS13Q76LX8 1427 aa17.35■□□□□ 0.37
IRF1-204ENST00000439555 NHSL1Q5SYE7 1610 aa17.35■□□□□ 0.37
IRF1-204ENST00000439555 CHGAP10645 457 aaKnown RBP17.34■□□□□ 0.37
IRF1-204ENST00000439555 AFF2P51816 1311 aa17.34■□□□□ 0.37
IRF1-204ENST00000439555 RBM6P78332 1123 aaKnown RBP17.34■□□□□ 0.37
IRF1-204ENST00000439555 NAIPQ13075 1403 aa17.34■□□□□ 0.37
IRF1-204ENST00000439555 LRRC59Q96AG4 307 aaKnown RBP17.33■□□□□ 0.36
IRF1-204ENST00000439555 E9PCH4 1651 aa17.32■□□□□ 0.36
IRF1-204ENST00000439555 TRPM2O94759 1503 aa17.31■□□□□ 0.36
IRF1-204ENST00000439555 FOXD1Q16676 465 aa17.31■□□□□ 0.36
IRF1-204ENST00000439555 QTRT2Q9H974 415 aaKnown RBP17.31■□□□□ 0.36
IRF1-204ENST00000439555 HFM1A2PYH4 1435 aa17.3■□□□□ 0.36
IRF1-204ENST00000439555 NUTM2BA6NNL0 878 aaPredicted RBP17.3■□□□□ 0.36
IRF1-204ENST00000439555 NUTM2EB1AL46 878 aaPredicted RBP17.3■□□□□ 0.36
IRF1-204ENST00000439555 NUTM2AQ8IVF1 878 aaPredicted RBP17.3■□□□□ 0.36
IRF1-204ENST00000439555 AMOTL2Q9Y2J4 779 aa17.3■□□□□ 0.36
IRF1-204ENST00000439555 SRCAPQ6ZRS2 3230 aa17.3■□□□□ 0.36
IRF1-204ENST00000439555 ASXL1Q8IXJ9 1541 aa17.29■□□□□ 0.36
IRF1-204ENST00000439555 NGLY1Q96IV0 654 aa17.27■□□□□ 0.36
IRF1-204ENST00000439555 RGS12O14924 1447 aa17.27■□□□□ 0.35
IRF1-204ENST00000439555 XRN1Q8IZH2 1706 aaKnown RBP17.26■□□□□ 0.35
IRF1-204ENST00000439555 MST1RQ04912 1400 aa17.25■□□□□ 0.35
IRF1-204ENST00000439555 PTPRUQ92729 1446 aa17.25■□□□□ 0.35
IRF1-204ENST00000439555 NUTM2DQ5VT03 806 aaPredicted RBP17.24■□□□□ 0.35
IRF1-204ENST00000439555 LAMC1P11047 1609 aa17.23■□□□□ 0.35
IRF1-204ENST00000439555 C8orf37Q96NL8 207 aa17.23■□□□□ 0.35
IRF1-204ENST00000439555 ATAD2Q6PL18 1390 aa17.23■□□□□ 0.35
IRF1-204ENST00000439555 PNPLA6Q8IY17 1366 aa17.22■□□□□ 0.35
IRF1-204ENST00000439555 NRXN3Q9Y4C0 1643 aa17.21■□□□□ 0.35
IRF1-204ENST00000439555 ZNF326Q5BKZ1 582 aaKnown RBP17.21■□□□□ 0.35
IRF1-204ENST00000439555 CCDC125Q86Z20 511 aa17.21■□□□□ 0.35
IRF1-204ENST00000439555 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.35
IRF1-204ENST00000439555 ACIN1Q9UKV3 1341 aaKnown RBP17.21■□□□□ 0.34
IRF1-204ENST00000439555 SETBP1Q9Y6X0 1596 aa17.2■□□□□ 0.34
IRF1-204ENST00000439555 ZRANB1Q9UGI0 708 aa17.2■□□□□ 0.34
IRF1-204ENST00000439555 SPHKAPQ2M3C7 1700 aa17.17■□□□□ 0.34
IRF1-204ENST00000439555 FNBP4Q8N3X1 1017 aaPredicted RBP17.17■□□□□ 0.34
IRF1-204ENST00000439555 TRPC5Q9UL62 973 aaPredicted RBP17.17■□□□□ 0.34
IRF1-204ENST00000439555 RPGRIP1LQ68CZ1 1315 aa17.17■□□□□ 0.34
IRF1-204ENST00000439555 ADGRL3Q9HAR2 1447 aa17.16■□□□□ 0.34
IRF1-204ENST00000439555 VGFO15240 615 aaPredicted RBP17.16■□□□□ 0.34
IRF1-204ENST00000439555 EP400Q96L91 3159 aa17.16■□□□□ 0.34
IRF1-204ENST00000439555 NALCNQ8IZF0 1738 aa17.16■□□□□ 0.34
IRF1-204ENST00000439555 PTCH1Q13635 1447 aa17.15■□□□□ 0.34
IRF1-204ENST00000439555 USP21Q9UK80 565 aa17.15■□□□□ 0.34
IRF1-204ENST00000439555 MARF1Q9Y4F3 1742 aaKnown RBP17.14■□□□□ 0.33
IRF1-204ENST00000439555 SOS2Q07890 1332 aaPredicted RBP17.14■□□□□ 0.33
IRF1-204ENST00000439555 CLTCL1P53675 1640 aa17.13■□□□□ 0.33
IRF1-204ENST00000439555 COL22A1Q8NFW1 1626 aaPredicted RBP17.13■□□□□ 0.33
IRF1-204ENST00000439555 ADAMTS2O95450 1211 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms