RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 RALGAPBQ86X10 1494 aa14.26□□□□□ -0.13
CBX5-202ENST00000439541 NLRP1Q9C000 1473 aa14.26□□□□□ -0.13
CBX5-202ENST00000439541 ADGRF5Q8IZF2 1346 aa14.25□□□□□ -0.13
CBX5-202ENST00000439541 STAG3Q9UJ98 1225 aa14.25□□□□□ -0.13
CBX5-202ENST00000439541 SENP3Q9H4L4 574 aaPredicted RBP14.25□□□□□ -0.13
CBX5-202ENST00000439541 NRXN1Q9ULB1 1477 aa14.23□□□□□ -0.13
CBX5-202ENST00000439541 CEP170BQ9Y4F5 1589 aaPredicted RBP14.23□□□□□ -0.13
CBX5-202ENST00000439541 KDM5AP29375 1690 aaKnown RBP14.22□□□□□ -0.13
CBX5-202ENST00000439541 PIK3C2GO75747 1445 aa14.21□□□□□ -0.13
CBX5-202ENST00000439541 KDM4FA0A1W2PPD8 638 aa14.21□□□□□ -0.13
CBX5-202ENST00000439541 HIRIP3Q9BW71 556 aaPredicted RBP14.21□□□□□ -0.13
CBX5-202ENST00000439541 ZFYVE9O95405 1425 aa14.21□□□□□ -0.13
CBX5-202ENST00000439541 RIMS2Q9UQ26 1411 aa14.21□□□□□ -0.13
CBX5-202ENST00000439541 ROCK2O75116 1388 aaKnown RBP14.21□□□□□ -0.14
CBX5-202ENST00000439541 ZNF142P52746 1687 aaPredicted RBP14.2□□□□□ -0.14
CBX5-202ENST00000439541 NBPF1Q3BBV0 1214 aa14.2□□□□□ -0.14
CBX5-202ENST00000439541 RPGRIP1LQ68CZ1 1315 aa14.2□□□□□ -0.14
CBX5-202ENST00000439541 PELP1Q8IZL8 1130 aaKnown RBP14.19□□□□□ -0.14
CBX5-202ENST00000439541 TMEM2Q9UHN6 1383 aa14.17□□□□□ -0.14
CBX5-202ENST00000439541 CFAP70Q5T0N1 1121 aa14.17□□□□□ -0.14
CBX5-202ENST00000439541 KIAA1210Q9ULL0 1709 aa14.16□□□□□ -0.14
CBX5-202ENST00000439541 GPRASP1Q5JY77 1395 aa14.16□□□□□ -0.14
CBX5-202ENST00000439541 USP47Q96K76 1375 aa14.16□□□□□ -0.14
CBX5-202ENST00000439541 CARD11Q9BXL7 1154 aa14.16□□□□□ -0.14
CBX5-202ENST00000439541 DIEXFQ68CQ4 756 aaKnown RBP14.15□□□□□ -0.14
CBX5-202ENST00000439541 LAMC1P11047 1609 aa14.15□□□□□ -0.14
CBX5-202ENST00000439541 ASXL1Q8IXJ9 1541 aa14.15□□□□□ -0.14
CBX5-202ENST00000439541 IQGAP1P46940 1657 aa14.15□□□□□ -0.14
CBX5-202ENST00000439541 ARHGAP23Q9P227 1491 aa14.15□□□□□ -0.14
CBX5-202ENST00000439541 NRXN3Q9Y4C0 1643 aa14.15□□□□□ -0.14
CBX5-202ENST00000439541 VGFO15240 615 aaPredicted RBP14.15□□□□□ -0.14
CBX5-202ENST00000439541 HSPA5P11021 654 aaKnown RBP14.15□□□□□ -0.14
CBX5-202ENST00000439541 STAC3Q96MF2 364 aa14.15□□□□□ -0.14
CBX5-202ENST00000439541 SLIT1O75093 1534 aa14.15□□□□□ -0.14
CBX5-202ENST00000439541 ZNF316A6NFI3 1004 aaPredicted RBP14.14□□□□□ -0.15
CBX5-202ENST00000439541 ADGRB1O14514 1584 aa14.14□□□□□ -0.15
CBX5-202ENST00000439541 LTKP29376 864 aa14.13□□□□□ -0.15
CBX5-202ENST00000439541 EIF4G2P78344 907 aaKnown RBP eCLIP14.13□□□□□ -0.15
CBX5-202ENST00000439541 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
CBX5-202ENST00000439541 SETD1AO15047 1707 aaKnown RBP14.12□□□□□ -0.15
CBX5-202ENST00000439541 SETBP1Q9Y6X0 1596 aa14.12□□□□□ -0.15
CBX5-202ENST00000439541 ALKQ9UM73 1620 aa14.12□□□□□ -0.15
CBX5-202ENST00000439541 CENPBP07199 599 aaPredicted RBP14.11□□□□□ -0.15
CBX5-202ENST00000439541 TMEM132EQ6IEE7 984 aa14.11□□□□□ -0.15
CBX5-202ENST00000439541 C14orf93Q9H972 538 aaKnown RBP14.11□□□□□ -0.15
CBX5-202ENST00000439541 SCAF11Q99590 1463 aaKnown RBP14.1□□□□□ -0.15
CBX5-202ENST00000439541 THEMISQ8N1K5 641 aaPredicted RBP14.1□□□□□ -0.15
CBX5-202ENST00000439541 TXNDC2Q86VQ3 553 aa14.09□□□□□ -0.15
CBX5-202ENST00000439541 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.09□□□□□ -0.15
CBX5-202ENST00000439541 SETD1BQ9UPS6 1966 aaKnown RBP14.09□□□□□ -0.15
CBX5-202ENST00000439541 PLEKHG1Q9ULL1 1385 aa14.08□□□□□ -0.16
CBX5-202ENST00000439541 ADAMTS13Q76LX8 1427 aa14.07□□□□□ -0.16
CBX5-202ENST00000439541 ST20-MTHFSA0A0A6YYL1 179 aa14.06□□□□□ -0.16
CBX5-202ENST00000439541 EID1Q9Y6B2 187 aa14.06□□□□□ -0.16
CBX5-202ENST00000439541 BCANQ96GW7 911 aa14.06□□□□□ -0.16
CBX5-202ENST00000439541 LMTK3Q96Q04 1460 aa14.05□□□□□ -0.16
CBX5-202ENST00000439541 METP08581 1390 aa14.05□□□□□ -0.16
CBX5-202ENST00000439541 ARHGEF28Q8N1W1 1705 aaKnown RBP14.05□□□□□ -0.16
CBX5-202ENST00000439541 POLR1AO95602 1720 aaPredicted RBP14.05□□□□□ -0.16
CBX5-202ENST00000439541 HDGFP51858 240 aaKnown RBP14.04□□□□□ -0.16
CBX5-202ENST00000439541 TRAK1Q9UPV9 953 aa14.04□□□□□ -0.16
CBX5-202ENST00000439541 C11orf95C9JLR9 678 aaPredicted RBP14.04□□□□□ -0.16
CBX5-202ENST00000439541 HSPA2P54652 639 aa14.04□□□□□ -0.16
CBX5-202ENST00000439541 SLC26A8Q96RN1 970 aa14.04□□□□□ -0.16
CBX5-202ENST00000439541 STK26Q9P289 416 aa14.04□□□□□ -0.16
CBX5-202ENST00000439541 YTHDC2Q9H6S0 1430 aaKnown RBP14.03□□□□□ -0.16
CBX5-202ENST00000439541 MED14O60244 1454 aa14.02□□□□□ -0.16
CBX5-202ENST00000439541 EIF3AQ14152 1382 aaKnown RBP14.02□□□□□ -0.17
CBX5-202ENST00000439541 WASHC2AQ641Q2 1341 aa14.02□□□□□ -0.17
CBX5-202ENST00000439541 QRICH2Q9H0J4 1663 aa14.01□□□□□ -0.17
CBX5-202ENST00000439541 NCKAP5LQ9HCH0 1330 aa14.01□□□□□ -0.17
CBX5-202ENST00000439541 ANKLE2Q86XL3 938 aa14.01□□□□□ -0.17
CBX5-202ENST00000439541 TESK2Q96S53 571 aa14.01□□□□□ -0.17
CBX5-202ENST00000439541 DIP2AQ14689 1571 aa14□□□□□ -0.17
CBX5-202ENST00000439541 DISP3Q9P2K9 1392 aa14□□□□□ -0.17
CBX5-202ENST00000439541 NPHP4O75161 1426 aaPredicted RBP14□□□□□ -0.17
CBX5-202ENST00000439541 KIF7Q2M1P5 1343 aa13.99□□□□□ -0.17
CBX5-202ENST00000439541 PTPRUQ92729 1446 aa13.99□□□□□ -0.17
CBX5-202ENST00000439541 LRPPRCP42704 1394 aaKnown RBP13.99□□□□□ -0.17
CBX5-202ENST00000439541 CCDC7Q96M83 1385 aa13.99□□□□□ -0.17
CBX5-202ENST00000439541 SAFB2Q14151 953 aaKnown RBP eCLIP13.98□□□□□ -0.17
CBX5-202ENST00000439541 KNDC1Q76NI1 1749 aa13.98□□□□□ -0.17
CBX5-202ENST00000439541 CENPJQ9HC77 1338 aaPredicted RBP13.98□□□□□ -0.17
CBX5-202ENST00000439541 PLEKHH1Q9ULM0 1364 aa13.97□□□□□ -0.17
CBX5-202ENST00000439541 POLR3GLQ9BT43 218 aa13.97□□□□□ -0.17
CBX5-202ENST00000439541 CPS1P31327 1500 aa13.97□□□□□ -0.17
CBX5-202ENST00000439541 DLC1Q96QB1 1528 aa13.96□□□□□ -0.17
CBX5-202ENST00000439541 PRAM1Q96QH2 718 aa13.96□□□□□ -0.17
CBX5-202ENST00000439541 XRN1Q8IZH2 1706 aaKnown RBP13.95□□□□□ -0.18
CBX5-202ENST00000439541 TECPR2O15040 1411 aa13.95□□□□□ -0.18
CBX5-202ENST00000439541 ROBO2Q9HCK4 1378 aa13.95□□□□□ -0.18
CBX5-202ENST00000439541 DDX10Q13206 875 aaKnown RBP13.94□□□□□ -0.18
CBX5-202ENST00000439541 TBX22Q9Y458 520 aa13.94□□□□□ -0.18
CBX5-202ENST00000439541 TULP4Q9NRJ4 1543 aa13.94□□□□□ -0.18
CBX5-202ENST00000439541 ABCC11Q96J66 1382 aa13.94□□□□□ -0.18
CBX5-202ENST00000439541 WAPLQ7Z5K2 1190 aa13.94□□□□□ -0.18
CBX5-202ENST00000439541 STRCQ7RTU9 1775 aa13.94□□□□□ -0.18
CBX5-202ENST00000439541 SBNO2Q9Y2G9 1366 aa13.93□□□□□ -0.18
CBX5-202ENST00000439541 TMF1P82094 1093 aa13.92□□□□□ -0.18
CBX5-202ENST00000439541 POGKQ9P215 609 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms