RNA–Protein interactions for RNA: ENST00000439209.5

LRTOMT-208, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 3 BASIC

Gene LRTOMT, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-208ENST00000439209 ZFYVE9O95405 1425 aa17.21■□□□□ 0.34
LRTOMT-208ENST00000439209 SPHKAPQ2M3C7 1700 aa17.2■□□□□ 0.34
LRTOMT-208ENST00000439209 ITGAEP38570 1179 aa17.19■□□□□ 0.34
LRTOMT-208ENST00000439209 SLC26A8Q96RN1 970 aa17.17■□□□□ 0.34
LRTOMT-208ENST00000439209 RIMS2Q9UQ26 1411 aa17.17■□□□□ 0.34
LRTOMT-208ENST00000439209 NKTRP30414 1462 aaKnown RBP17.17■□□□□ 0.34
LRTOMT-208ENST00000439209 NUP155O75694 1391 aa17.15■□□□□ 0.34
LRTOMT-208ENST00000439209 TMEM94Q12767 1356 aa17.15■□□□□ 0.34
LRTOMT-208ENST00000439209 PLEKHG1Q9ULL1 1385 aa17.15■□□□□ 0.34
LRTOMT-208ENST00000439209 RRBP1Q9P2E9 1410 aaKnown RBP17.14■□□□□ 0.33
LRTOMT-208ENST00000439209 ROBO1Q9Y6N7 1651 aa17.13■□□□□ 0.33
LRTOMT-208ENST00000439209 KCNA6P17658 529 aa17.13■□□□□ 0.33
LRTOMT-208ENST00000439209 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
LRTOMT-208ENST00000439209 DIP2AQ14689 1571 aa17.12■□□□□ 0.33
LRTOMT-208ENST00000439209 SOCS7O14512 581 aa17.12■□□□□ 0.33
LRTOMT-208ENST00000439209 PPP1R15AO75807 674 aaPredicted RBP17.11■□□□□ 0.33
LRTOMT-208ENST00000439209 CHGAP10645 457 aaKnown RBP17.11■□□□□ 0.33
LRTOMT-208ENST00000439209 BCANQ96GW7 911 aa17.11■□□□□ 0.33
LRTOMT-208ENST00000439209 PROSER2Q86WR7 435 aaPredicted RBP17.09■□□□□ 0.33
LRTOMT-208ENST00000439209 RBM33Q96EV2 1170 aaKnown RBP17.09■□□□□ 0.33
LRTOMT-208ENST00000439209 CLTCL1P53675 1640 aa17.08■□□□□ 0.32
LRTOMT-208ENST00000439209 NRXN3Q9Y4C0 1643 aa17.08■□□□□ 0.32
LRTOMT-208ENST00000439209 ADAMTS13Q76LX8 1427 aa17.08■□□□□ 0.32
LRTOMT-208ENST00000439209 KIF1BO60333 1816 aa17.07■□□□□ 0.32
LRTOMT-208ENST00000439209 NAIPQ13075 1403 aa17.06■□□□□ 0.32
LRTOMT-208ENST00000439209 FAM135BQ49AJ0 1406 aa17.06■□□□□ 0.32
LRTOMT-208ENST00000439209 HDGFP51858 240 aaKnown RBP17.06■□□□□ 0.32
LRTOMT-208ENST00000439209 NUTM2DQ5VT03 806 aaPredicted RBP17.06■□□□□ 0.32
LRTOMT-208ENST00000439209 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.06■□□□□ 0.32
LRTOMT-208ENST00000439209 TRPM2O94759 1503 aa17.06■□□□□ 0.32
LRTOMT-208ENST00000439209 PHLPP1O60346 1717 aa17.04■□□□□ 0.32
LRTOMT-208ENST00000439209 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.04■□□□□ 0.32
LRTOMT-208ENST00000439209 MSH6P52701 1360 aa17.03■□□□□ 0.32
LRTOMT-208ENST00000439209 TBX22Q9Y458 520 aa17.03■□□□□ 0.32
LRTOMT-208ENST00000439209 SETBP1Q9Y6X0 1596 aa17.02■□□□□ 0.32
LRTOMT-208ENST00000439209 XRN1Q8IZH2 1706 aaKnown RBP17.02■□□□□ 0.32
LRTOMT-208ENST00000439209 NEXMIFQ5QGS0 1516 aa17.01■□□□□ 0.31
LRTOMT-208ENST00000439209 PHF23Q9BUL5 403 aaPredicted RBP17■□□□□ 0.31
LRTOMT-208ENST00000439209 PIK3R4Q99570 1358 aa17■□□□□ 0.31
LRTOMT-208ENST00000439209 HFM1A2PYH4 1435 aa16.99■□□□□ 0.31
LRTOMT-208ENST00000439209 PTPRUQ92729 1446 aa16.99■□□□□ 0.31
LRTOMT-208ENST00000439209 NCOA3Q9Y6Q9 1424 aa16.98■□□□□ 0.31
LRTOMT-208ENST00000439209 COL16A1Q07092 1604 aaPredicted RBP16.97■□□□□ 0.31
LRTOMT-208ENST00000439209 SETD1AO15047 1707 aaKnown RBP16.96■□□□□ 0.31
LRTOMT-208ENST00000439209 ZNF326Q5BKZ1 582 aaKnown RBP16.95■□□□□ 0.3
LRTOMT-208ENST00000439209 PPLO60437 1756 aa16.94■□□□□ 0.3
LRTOMT-208ENST00000439209 SLAIN2Q9P270 581 aa16.94■□□□□ 0.3
LRTOMT-208ENST00000439209 NALCNQ8IZF0 1738 aa16.93■□□□□ 0.3
LRTOMT-208ENST00000439209 C14orf37Q86TY3 774 aa16.92■□□□□ 0.3
LRTOMT-208ENST00000439209 AMOTL2Q9Y2J4 779 aa16.92■□□□□ 0.3
LRTOMT-208ENST00000439209 AHDC1Q5TGY3 1603 aaPredicted RBP16.92■□□□□ 0.3
LRTOMT-208ENST00000439209 TRIM52Q96A61 297 aa16.91■□□□□ 0.3
LRTOMT-208ENST00000439209 METP08581 1390 aa16.9■□□□□ 0.3
LRTOMT-208ENST00000439209 SHPRHQ149N8 1683 aa16.9■□□□□ 0.3
LRTOMT-208ENST00000439209 C19orf44Q9H6X5 657 aa16.89■□□□□ 0.29
LRTOMT-208ENST00000439209 RGS17Q9UGC6 210 aaPredicted RBP16.89■□□□□ 0.29
LRTOMT-208ENST00000439209 NHSL1Q5SYE7 1610 aa16.88■□□□□ 0.29
LRTOMT-208ENST00000439209 DCCP43146 1447 aa16.88■□□□□ 0.29
LRTOMT-208ENST00000439209 CADPS2Q86UW7 1296 aa16.88■□□□□ 0.29
LRTOMT-208ENST00000439209 IFT172Q9UG01 1749 aa16.87■□□□□ 0.29
LRTOMT-208ENST00000439209 ATF3P18847 181 aa16.87■□□□□ 0.29
LRTOMT-208ENST00000439209 SLC4A1APQ9BWU0 796 aaKnown RBP16.87■□□□□ 0.29
LRTOMT-208ENST00000439209 JCADQ9P266 1359 aa16.87■□□□□ 0.29
LRTOMT-208ENST00000439209 ASXL1Q8IXJ9 1541 aa16.85■□□□□ 0.29
LRTOMT-208ENST00000439209 MST1RQ04912 1400 aa16.84■□□□□ 0.29
LRTOMT-208ENST00000439209 ADGRL3Q9HAR2 1447 aa16.84■□□□□ 0.29
LRTOMT-208ENST00000439209 LRP6O75581 1613 aa16.83■□□□□ 0.28
LRTOMT-208ENST00000439209 PTCH1Q13635 1447 aa16.81■□□□□ 0.28
LRTOMT-208ENST00000439209 FOXD1Q16676 465 aa16.81■□□□□ 0.28
LRTOMT-208ENST00000439209 BRINP3Q76B58 766 aa16.81■□□□□ 0.28
LRTOMT-208ENST00000439209 RPGRIP1LQ68CZ1 1315 aa16.79■□□□□ 0.28
LRTOMT-208ENST00000439209 VGFO15240 615 aaPredicted RBP16.79■□□□□ 0.28
LRTOMT-208ENST00000439209 POTEAQ6S8J7 498 aa16.79■□□□□ 0.28
LRTOMT-208ENST00000439209 CCDC144AA2RUR9 1427 aa16.79■□□□□ 0.28
LRTOMT-208ENST00000439209 PRAG1Q86YV5 1406 aa16.79■□□□□ 0.28
LRTOMT-208ENST00000439209 LAMC1P11047 1609 aa16.78■□□□□ 0.28
LRTOMT-208ENST00000439209 SPATA31A6Q5VVP1 1343 aa16.77■□□□□ 0.28
LRTOMT-208ENST00000439209 ROBO2Q9HCK4 1378 aa16.77■□□□□ 0.27
LRTOMT-208ENST00000439209 KNDC1Q76NI1 1749 aa16.76■□□□□ 0.27
LRTOMT-208ENST00000439209 SPATA31E1Q6ZUB1 1445 aa16.76■□□□□ 0.27
LRTOMT-208ENST00000439209 SETD5Q9C0A6 1442 aa16.75■□□□□ 0.27
LRTOMT-208ENST00000439209 MPHOSPH9Q99550 1183 aa16.74■□□□□ 0.27
LRTOMT-208ENST00000439209 C1orf167Q5SNV9 1468 aa16.73■□□□□ 0.27
LRTOMT-208ENST00000439209 CDC42BPGQ6DT37 1551 aa16.72■□□□□ 0.27
LRTOMT-208ENST00000439209 ADGRF5Q8IZF2 1346 aa16.71■□□□□ 0.27
LRTOMT-208ENST00000439209 MEX3CQ5U5Q3 659 aaKnown RBP16.71■□□□□ 0.27
LRTOMT-208ENST00000439209 DDX17Q92841 729 aaKnown RBP16.71■□□□□ 0.27
LRTOMT-208ENST00000439209 RGL3Q3MIN7 710 aa16.7■□□□□ 0.26
LRTOMT-208ENST00000439209 PIK3C2GO75747 1445 aa16.7■□□□□ 0.26
LRTOMT-208ENST00000439209 ANKRD30BQ9BXX2 1392 aa16.69■□□□□ 0.26
LRTOMT-208ENST00000439209 TECPR2O15040 1411 aa16.68■□□□□ 0.26
LRTOMT-208ENST00000439209 PNPLA6Q8IY17 1366 aa16.67■□□□□ 0.26
LRTOMT-208ENST00000439209 NUTM2BA6NNL0 878 aaPredicted RBP16.67■□□□□ 0.26
LRTOMT-208ENST00000439209 NUTM2EB1AL46 878 aaPredicted RBP16.67■□□□□ 0.26
LRTOMT-208ENST00000439209 NUTM2AQ8IVF1 878 aaPredicted RBP16.67■□□□□ 0.26
LRTOMT-208ENST00000439209 FMN2Q9NZ56 1722 aa16.67■□□□□ 0.26
LRTOMT-208ENST00000439209 RAB3GAP2Q9H2M9 1393 aa16.66■□□□□ 0.26
LRTOMT-208ENST00000439209 LRRC59Q96AG4 307 aaKnown RBP16.66■□□□□ 0.26
LRTOMT-208ENST00000439209 ORAI2Q96SN7 254 aa16.65■□□□□ 0.26
LRTOMT-208ENST00000439209 COL22A1Q8NFW1 1626 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms