RNA–Protein interactions for RNA: ENST00000439161.5

GGA1-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-212ENST00000439161 TONSLQ96HA7 1378 aa34.41■■■■□ 3.1
GGA1-212ENST00000439161 HDGFP51858 240 aaKnown RBP34.41■■■■□ 3.1
GGA1-212ENST00000439161 PPLO60437 1756 aa34.41■■■■□ 3.1
GGA1-212ENST00000439161 ZFYVE9O95405 1425 aa34.4■■■■□ 3.1
GGA1-212ENST00000439161 IFT172Q9UG01 1749 aa34.39■■■■□ 3.1
GGA1-212ENST00000439161 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.39■■■■□ 3.1
GGA1-212ENST00000439161 EID1Q9Y6B2 187 aa34.38■■■■□ 3.09
GGA1-212ENST00000439161 TXNDC2Q86VQ3 553 aa34.36■■■■□ 3.09
GGA1-212ENST00000439161 ANKLE2Q86XL3 938 aa34.36■■■■□ 3.09
GGA1-212ENST00000439161 L3MBTL2Q969R5 705 aa34.36■■■■□ 3.09
GGA1-212ENST00000439161 NUTM2DQ5VT03 806 aaPredicted RBP34.35■■■■□ 3.09
GGA1-212ENST00000439161 DCAF11Q8TEB1 546 aa34.35■■■■□ 3.09
GGA1-212ENST00000439161 SCAF11Q99590 1463 aaKnown RBP34.33■■■■□ 3.09
GGA1-212ENST00000439161 PPP1R15AO75807 674 aaPredicted RBP34.33■■■■□ 3.09
GGA1-212ENST00000439161 TIMELESSQ9UNS1 1208 aa34.33■■■■□ 3.09
GGA1-212ENST00000439161 VGFO15240 615 aaPredicted RBP34.32■■■■□ 3.08
GGA1-212ENST00000439161 LTKP29376 864 aa34.32■■■■□ 3.08
GGA1-212ENST00000439161 POLR1AO95602 1720 aaPredicted RBP34.32■■■■□ 3.08
GGA1-212ENST00000439161 STAC3Q96MF2 364 aa34.31■■■■□ 3.08
GGA1-212ENST00000439161 KDM2AQ9Y2K7 1162 aa34.3■■■■□ 3.08
GGA1-212ENST00000439161 MYOM2P54296 1465 aa34.29■■■■□ 3.08
GGA1-212ENST00000439161 NCKAP5LQ9HCH0 1330 aa34.28■■■■□ 3.08
GGA1-212ENST00000439161 ADGRF5Q8IZF2 1346 aa34.25■■■■□ 3.07
GGA1-212ENST00000439161 STRCQ7RTU9 1775 aa34.24■■■■□ 3.07
GGA1-212ENST00000439161 PLEKHG1Q9ULL1 1385 aa34.23■■■■□ 3.07
GGA1-212ENST00000439161 MED14O60244 1454 aa34.21■■■■□ 3.07
GGA1-212ENST00000439161 NRXN1Q9ULB1 1477 aa34.2■■■■□ 3.07
GGA1-212ENST00000439161 NPHP4O75161 1426 aaPredicted RBP34.2■■■■□ 3.06
GGA1-212ENST00000439161 BCANQ96GW7 911 aa34.19■■■■□ 3.06
GGA1-212ENST00000439161 SENP3Q9H4L4 574 aaPredicted RBP34.17■■■■□ 3.06
GGA1-212ENST00000439161 IQGAP1P46940 1657 aa34.16■■■■□ 3.06
GGA1-212ENST00000439161 PIK3C2GO75747 1445 aa34.16■■■■□ 3.06
GGA1-212ENST00000439161 SETBP1Q9Y6X0 1596 aa34.15■■■■□ 3.06
GGA1-212ENST00000439161 PRAG1Q86YV5 1406 aa34.14■■■■□ 3.06
GGA1-212ENST00000439161 NRXN3Q9Y4C0 1643 aa34.12■■■■□ 3.05
GGA1-212ENST00000439161 ADAMTS13Q76LX8 1427 aa34.08■■■■□ 3.05
GGA1-212ENST00000439161 DMRT2Q9Y5R5 561 aa34.08■■■■□ 3.05
GGA1-212ENST00000439161 ALKQ9UM73 1620 aa34.08■■■■□ 3.05
GGA1-212ENST00000439161 SLC26A8Q96RN1 970 aa34.07■■■■□ 3.04
GGA1-212ENST00000439161 LAMC1P11047 1609 aa34.07■■■■□ 3.04
GGA1-212ENST00000439161 DIP2AQ14689 1571 aa34.06■■■■□ 3.04
GGA1-212ENST00000439161 NBPF8Q3BBV2 869 aa34.06■■■■□ 3.04
GGA1-212ENST00000439161 C14orf93Q9H972 538 aaKnown RBP34.06■■■■□ 3.04
GGA1-212ENST00000439161 TBX22Q9Y458 520 aa34.05■■■■□ 3.04
GGA1-212ENST00000439161 KIAA1210Q9ULL0 1709 aa34.04■■■■□ 3.04
GGA1-212ENST00000439161 CFAP70Q5T0N1 1121 aa34.04■■■■□ 3.04
GGA1-212ENST00000439161 SETD1AO15047 1707 aaKnown RBP34.02■■■■□ 3.04
GGA1-212ENST00000439161 ZEB1P37275 1124 aaPredicted RBP34.01■■■■□ 3.03
GGA1-212ENST00000439161 TRPM1Q7Z4N2 1603 aa34.01■■■■□ 3.03
GGA1-212ENST00000439161 METP08581 1390 aa33.95■■■■□ 3.02
GGA1-212ENST00000439161 RALGAPBQ86X10 1494 aa33.94■■■■□ 3.02
GGA1-212ENST00000439161 PIK3R4Q99570 1358 aa33.93■■■■□ 3.02
GGA1-212ENST00000439161 NBPF1Q3BBV0 1214 aa33.92■■■■□ 3.02
GGA1-212ENST00000439161 TMEM132EQ6IEE7 984 aa33.92■■■■□ 3.02
GGA1-212ENST00000439161 ASXL1Q8IXJ9 1541 aa33.92■■■■□ 3.02
GGA1-212ENST00000439161 ADGRB1O14514 1584 aa33.9■■■■□ 3.02
GGA1-212ENST00000439161 ROCK2O75116 1388 aaKnown RBP33.9■■■■□ 3.02
GGA1-212ENST00000439161 CHD2O14647 1828 aaKnown RBP33.88■■■■□ 3.01
GGA1-212ENST00000439161 PTPRUQ92729 1446 aa33.85■■■■□ 3.01
GGA1-212ENST00000439161 GPRASP1Q5JY77 1395 aa33.85■■■■□ 3.01
GGA1-212ENST00000439161 YTHDC2Q9H6S0 1430 aaKnown RBP33.84■■■■□ 3.01
GGA1-212ENST00000439161 LRPPRCP42704 1394 aaKnown RBP33.84■■■■□ 3.01
GGA1-212ENST00000439161 KCNA6P17658 529 aa33.83■■■■□ 3.01
GGA1-212ENST00000439161 AMOTL2Q9Y2J4 779 aa33.82■■■■□ 3
GGA1-212ENST00000439161 CARD11Q9BXL7 1154 aa33.81■■■■□ 3
GGA1-212ENST00000439161 STK26Q9P289 416 aa33.81■■■■□ 3
GGA1-212ENST00000439161 NWD1Q149M9 1564 aa33.81■■■■□ 3
GGA1-212ENST00000439161 XRN1Q8IZH2 1706 aaKnown RBP33.8■■■■□ 3
GGA1-212ENST00000439161 ZNF335Q9H4Z2 1342 aaPredicted RBP33.79■■■■□ 3
GGA1-212ENST00000439161 ABCC11Q96J66 1382 aa33.78■■■■□ 3
GGA1-212ENST00000439161 KNDC1Q76NI1 1749 aa33.78■■■■□ 3
GGA1-212ENST00000439161 STRCP1A6NGW2 1772 aa33.76■■■■□ 3
GGA1-212ENST00000439161 TRAK1Q9UPV9 953 aa33.75■■■□□ 2.99
GGA1-212ENST00000439161 TECPR2O15040 1411 aa33.74■■■□□ 2.99
GGA1-212ENST00000439161 NKTRP30414 1462 aaKnown RBP33.72■■■□□ 2.99
GGA1-212ENST00000439161 CPS1P31327 1500 aa33.72■■■□□ 2.99
GGA1-212ENST00000439161 DLC1Q96QB1 1528 aa33.72■■■□□ 2.99
GGA1-212ENST00000439161 PTCH1Q13635 1447 aa33.7■■■□□ 2.99
GGA1-212ENST00000439161 ARHGEF28Q8N1W1 1705 aaKnown RBP33.69■■■□□ 2.98
GGA1-212ENST00000439161 SIRT1Q96EB6 747 aa33.68■■■□□ 2.98
GGA1-212ENST00000439161 ROBO2Q9HCK4 1378 aa33.68■■■□□ 2.98
GGA1-212ENST00000439161 FAM135BQ49AJ0 1406 aa33.66■■■□□ 2.98
GGA1-212ENST00000439161 EIF3AQ14152 1382 aaKnown RBP33.65■■■□□ 2.98
GGA1-212ENST00000439161 PROSER2Q86WR7 435 aaPredicted RBP33.65■■■□□ 2.98
GGA1-212ENST00000439161 USP47Q96K76 1375 aa33.63■■■□□ 2.97
GGA1-212ENST00000439161 PRAM1Q96QH2 718 aa33.63■■■□□ 2.97
GGA1-212ENST00000439161 POGKQ9P215 609 aa33.63■■■□□ 2.97
GGA1-212ENST00000439161 LTBP4Q8N2S1 1624 aa33.62■■■□□ 2.97
GGA1-212ENST00000439161 WAPLQ7Z5K2 1190 aa33.62■■■□□ 2.97
GGA1-212ENST00000439161 PLEKHH1Q9ULM0 1364 aa33.59■■■□□ 2.97
GGA1-212ENST00000439161 LRRC7Q96NW7 1537 aa33.58■■■□□ 2.97
GGA1-212ENST00000439161 CENPJQ9HC77 1338 aaPredicted RBP33.58■■■□□ 2.97
GGA1-212ENST00000439161 EIF4G2P78344 907 aaKnown RBP eCLIP33.57■■■□□ 2.96
GGA1-212ENST00000439161 SAFB2Q14151 953 aaKnown RBP eCLIP33.56■■■□□ 2.96
GGA1-212ENST00000439161 TMEM94Q12767 1356 aa33.56■■■□□ 2.96
GGA1-212ENST00000439161 RBM33Q96EV2 1170 aaKnown RBP33.55■■■□□ 2.96
GGA1-212ENST00000439161 QRICH2Q9H0J4 1663 aa33.54■■■□□ 2.96
GGA1-212ENST00000439161 ST20-MTHFSA0A0A6YYL1 179 aa33.53■■■□□ 2.96
GGA1-212ENST00000439161 NCOA3Q9Y6Q9 1424 aa33.53■■■□□ 2.96
GGA1-212ENST00000439161 XIRP1Q702N8 1843 aaKnown RBP33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms