RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 MSH6P52701 1360 aa12.37□□□□□ -0.43
LINC00578-201ENST00000439009 PLEKHG1Q9ULL1 1385 aa12.37□□□□□ -0.43
LINC00578-201ENST00000439009 RPRD2Q5VT52 1461 aaKnown RBP12.37□□□□□ -0.43
LINC00578-201ENST00000439009 CROCC2H7BZ55 1655 aa12.36□□□□□ -0.43
LINC00578-201ENST00000439009 ADGRL2O95490 1459 aa12.36□□□□□ -0.43
LINC00578-201ENST00000439009 JCADQ9P266 1359 aa12.36□□□□□ -0.43
LINC00578-201ENST00000439009 HDGFP51858 240 aaKnown RBP12.36□□□□□ -0.43
LINC00578-201ENST00000439009 ADGRB3O60242 1522 aa12.36□□□□□ -0.43
LINC00578-201ENST00000439009 ROBO1Q9Y6N7 1651 aa12.35□□□□□ -0.43
LINC00578-201ENST00000439009 APLP2Q06481 763 aa12.35□□□□□ -0.43
LINC00578-201ENST00000439009 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.33□□□□□ -0.44
LINC00578-201ENST00000439009 ANKRD50Q9ULJ7 1429 aa12.32□□□□□ -0.44
LINC00578-201ENST00000439009 RIMS2Q9UQ26 1411 aa12.32□□□□□ -0.44
LINC00578-201ENST00000439009 BCANQ96GW7 911 aa12.32□□□□□ -0.44
LINC00578-201ENST00000439009 SPATA31A6Q5VVP1 1343 aa12.32□□□□□ -0.44
LINC00578-201ENST00000439009 C19orf44Q9H6X5 657 aa12.31□□□□□ -0.44
LINC00578-201ENST00000439009 PIK3R4Q99570 1358 aa12.3□□□□□ -0.44
LINC00578-201ENST00000439009 PPP1R15AO75807 674 aaPredicted RBP12.3□□□□□ -0.44
LINC00578-201ENST00000439009 CADPS2Q86UW7 1296 aa12.3□□□□□ -0.44
LINC00578-201ENST00000439009 ADAMTS13Q76LX8 1427 aa12.29□□□□□ -0.44
LINC00578-201ENST00000439009 ZNF772Q68DY9 489 aaPredicted RBP12.28□□□□□ -0.44
LINC00578-201ENST00000439009 TMEM131LA2VDJ0 1609 aa12.27□□□□□ -0.44
LINC00578-201ENST00000439009 COL16A1Q07092 1604 aaPredicted RBP12.27□□□□□ -0.44
LINC00578-201ENST00000439009 UPF1Q92900 1129 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC00578-201ENST00000439009 CHD2O14647 1828 aaKnown RBP12.27□□□□□ -0.45
LINC00578-201ENST00000439009 LRP6O75581 1613 aa12.26□□□□□ -0.45
LINC00578-201ENST00000439009 PHLPP1O60346 1717 aa12.26□□□□□ -0.45
LINC00578-201ENST00000439009 ATF3P18847 181 aa12.26□□□□□ -0.45
LINC00578-201ENST00000439009 FAM50AQ14320 339 aaKnown RBP12.25□□□□□ -0.45
LINC00578-201ENST00000439009 BRINP3Q76B58 766 aa12.25□□□□□ -0.45
LINC00578-201ENST00000439009 AHDC1Q5TGY3 1603 aaPredicted RBP12.25□□□□□ -0.45
LINC00578-201ENST00000439009 DIP2AQ14689 1571 aa12.24□□□□□ -0.45
LINC00578-201ENST00000439009 C14orf37Q86TY3 774 aa12.24□□□□□ -0.45
LINC00578-201ENST00000439009 AMOTL2Q9Y2J4 779 aa12.24□□□□□ -0.45
LINC00578-201ENST00000439009 DCCP43146 1447 aa12.23□□□□□ -0.45
LINC00578-201ENST00000439009 PTPRUQ92729 1446 aa12.23□□□□□ -0.45
LINC00578-201ENST00000439009 ROCK1Q13464 1354 aa12.23□□□□□ -0.45
LINC00578-201ENST00000439009 CHGAP10645 457 aaKnown RBP12.22□□□□□ -0.45
LINC00578-201ENST00000439009 RXRBP28702 533 aa12.22□□□□□ -0.45
LINC00578-201ENST00000439009 MEX3CQ5U5Q3 659 aaKnown RBP12.22□□□□□ -0.45
LINC00578-201ENST00000439009 NUTM2DQ5VT03 806 aaPredicted RBP12.22□□□□□ -0.45
LINC00578-201ENST00000439009 CDK12Q9NYV4 1490 aaPredicted RBP12.21□□□□□ -0.45
LINC00578-201ENST00000439009 SETD5Q9C0A6 1442 aa12.21□□□□□ -0.45
LINC00578-201ENST00000439009 UNC13BO14795 1591 aa12.21□□□□□ -0.46
LINC00578-201ENST00000439009 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.2□□□□□ -0.46
LINC00578-201ENST00000439009 GCC2Q8IWJ2 1684 aa12.19□□□□□ -0.46
LINC00578-201ENST00000439009 TRIM52Q96A61 297 aa12.19□□□□□ -0.46
LINC00578-201ENST00000439009 LRRC59Q96AG4 307 aaKnown RBP12.19□□□□□ -0.46
LINC00578-201ENST00000439009 TRPM2O94759 1503 aa12.19□□□□□ -0.46
LINC00578-201ENST00000439009 SHPRHQ149N8 1683 aa12.19□□□□□ -0.46
LINC00578-201ENST00000439009 SETD1AO15047 1707 aaKnown RBP12.18□□□□□ -0.46
LINC00578-201ENST00000439009 MST1RQ04912 1400 aa12.18□□□□□ -0.46
LINC00578-201ENST00000439009 MYO5BQ9ULV0 1848 aa12.18□□□□□ -0.46
LINC00578-201ENST00000439009 NUP155O75694 1391 aa12.18□□□□□ -0.46
LINC00578-201ENST00000439009 E9PCH4 1651 aa12.16□□□□□ -0.46
LINC00578-201ENST00000439009 AFF2P51816 1311 aa12.16□□□□□ -0.46
LINC00578-201ENST00000439009 IQGAP3Q86VI3 1631 aa12.16□□□□□ -0.46
LINC00578-201ENST00000439009 NUTM2BA6NNL0 878 aaPredicted RBP12.16□□□□□ -0.46
LINC00578-201ENST00000439009 NUTM2EB1AL46 878 aaPredicted RBP12.16□□□□□ -0.46
LINC00578-201ENST00000439009 NUTM2AQ8IVF1 878 aaPredicted RBP12.16□□□□□ -0.46
LINC00578-201ENST00000439009 METP08581 1390 aa12.16□□□□□ -0.46
LINC00578-201ENST00000439009 ASXL1Q8IXJ9 1541 aa12.16□□□□□ -0.46
LINC00578-201ENST00000439009 SETBP1Q9Y6X0 1596 aa12.15□□□□□ -0.46
LINC00578-201ENST00000439009 QTRT2Q9H974 415 aaKnown RBP12.14□□□□□ -0.47
LINC00578-201ENST00000439009 PNPLA6Q8IY17 1366 aa12.14□□□□□ -0.47
LINC00578-201ENST00000439009 XRN1Q8IZH2 1706 aaKnown RBP12.14□□□□□ -0.47
LINC00578-201ENST00000439009 ADGRL3Q9HAR2 1447 aa12.13□□□□□ -0.47
LINC00578-201ENST00000439009 RBM6P78332 1123 aaKnown RBP12.13□□□□□ -0.47
LINC00578-201ENST00000439009 NRXN3Q9Y4C0 1643 aa12.12□□□□□ -0.47
LINC00578-201ENST00000439009 DDX17Q92841 729 aaKnown RBP12.11□□□□□ -0.47
LINC00578-201ENST00000439009 ZNF326Q5BKZ1 582 aaKnown RBP12.1□□□□□ -0.47
LINC00578-201ENST00000439009 C8orf37Q96NL8 207 aa12.1□□□□□ -0.47
LINC00578-201ENST00000439009 NHSL1Q5SYE7 1610 aa12.1□□□□□ -0.47
LINC00578-201ENST00000439009 RGS12O14924 1447 aa12.1□□□□□ -0.47
LINC00578-201ENST00000439009 SOS2Q07890 1332 aaPredicted RBP12.1□□□□□ -0.47
LINC00578-201ENST00000439009 SRCAPQ6ZRS2 3230 aa12.09□□□□□ -0.47
LINC00578-201ENST00000439009 C1orf167Q5SNV9 1468 aa12.08□□□□□ -0.47
LINC00578-201ENST00000439009 FNBP4Q8N3X1 1017 aaPredicted RBP12.08□□□□□ -0.48
LINC00578-201ENST00000439009 NGLY1Q96IV0 654 aa12.08□□□□□ -0.48
LINC00578-201ENST00000439009 PRAG1Q86YV5 1406 aa12.08□□□□□ -0.48
LINC00578-201ENST00000439009 PTCH1Q13635 1447 aa12.07□□□□□ -0.48
LINC00578-201ENST00000439009 VGFO15240 615 aaPredicted RBP12.06□□□□□ -0.48
LINC00578-201ENST00000439009 LAMC1P11047 1609 aa12.06□□□□□ -0.48
LINC00578-201ENST00000439009 NEXMIFQ5QGS0 1516 aa12.06□□□□□ -0.48
LINC00578-201ENST00000439009 ADAMTS2O95450 1211 aa12.05□□□□□ -0.48
LINC00578-201ENST00000439009 ORAI2Q96SN7 254 aa12.05□□□□□ -0.48
LINC00578-201ENST00000439009 TRPC5Q9UL62 973 aaPredicted RBP12.05□□□□□ -0.48
LINC00578-201ENST00000439009 RPGRIP1LQ68CZ1 1315 aa12.05□□□□□ -0.48
LINC00578-201ENST00000439009 ROBO2Q9HCK4 1378 aa12.05□□□□□ -0.48
LINC00578-201ENST00000439009 ITGAEP38570 1179 aa12.04□□□□□ -0.48
LINC00578-201ENST00000439009 USP21Q9UK80 565 aa12.04□□□□□ -0.48
LINC00578-201ENST00000439009 ATAD2Q6PL18 1390 aa12.04□□□□□ -0.48
LINC00578-201ENST00000439009 SPHKAPQ2M3C7 1700 aa12.03□□□□□ -0.48
LINC00578-201ENST00000439009 HFM1A2PYH4 1435 aa12.02□□□□□ -0.49
LINC00578-201ENST00000439009 ATRNO75882 1429 aa12.02□□□□□ -0.49
LINC00578-201ENST00000439009 CLTCL1P53675 1640 aa12.01□□□□□ -0.49
LINC00578-201ENST00000439009 NALCNQ8IZF0 1738 aa12.01□□□□□ -0.49
LINC00578-201ENST00000439009 CCDC125Q86Z20 511 aa12.01□□□□□ -0.49
LINC00578-201ENST00000439009 MYOM2P54296 1465 aa12□□□□□ -0.49
LINC00578-201ENST00000439009 FOXD1Q16676 465 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms