RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CCDC102AQ96A19 550 aa8.46□□□□□ -1.06
TRAPPC13-204ENST00000438419 ZFRQ96KR1 1074 aaKnown RBP8.46□□□□□ -1.06
TRAPPC13-204ENST00000438419 KRI1Q8N9T8 703 aaKnown RBP8.45□□□□□ -1.06
TRAPPC13-204ENST00000438419 RCCD1A6NED2 376 aa8.44□□□□□ -1.06
TRAPPC13-204ENST00000438419 SLC24A3Q9HC58 644 aa8.44□□□□□ -1.06
TRAPPC13-204ENST00000438419 NLRP7Q8WX94 980 aa8.43□□□□□ -1.06
TRAPPC13-204ENST00000438419 PRKCSHP14314 528 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC13-204ENST00000438419 DNAJB2P25686 324 aa8.41□□□□□ -1.06
TRAPPC13-204ENST00000438419 SAMD7Q7Z3H4 446 aa8.41□□□□□ -1.06
TRAPPC13-204ENST00000438419 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.4□□□□□ -1.06
TRAPPC13-204ENST00000438419 NRG2O14511 850 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC13-204ENST00000438419 TMEM134Q9H6X4 195 aa8.4□□□□□ -1.06
TRAPPC13-204ENST00000438419 SWT1Q5T5J6 900 aaKnown RBP8.39□□□□□ -1.07
TRAPPC13-204ENST00000438419 ANKK1Q8NFD2 765 aa8.39□□□□□ -1.07
TRAPPC13-204ENST00000438419 AK7Q96M32 723 aa8.39□□□□□ -1.07
TRAPPC13-204ENST00000438419 SOWAHBA6NEL2 793 aa8.38□□□□□ -1.07
TRAPPC13-204ENST00000438419 TRIM66O15016 1216 aa8.38□□□□□ -1.07
TRAPPC13-204ENST00000438419 BCAMP50895 628 aa8.38□□□□□ -1.07
TRAPPC13-204ENST00000438419 KCNC4Q03721 635 aa8.37□□□□□ -1.07
TRAPPC13-204ENST00000438419 LRCH3Q96II8 777 aa8.37□□□□□ -1.07
TRAPPC13-204ENST00000438419 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC13-204ENST00000438419 AMHR2Q16671 573 aa8.36□□□□□ -1.07
TRAPPC13-204ENST00000438419 TMUB1Q9BVT8 246 aa8.36□□□□□ -1.07
TRAPPC13-204ENST00000438419 REPIN1Q9BWE0 567 aaKnown RBP8.36□□□□□ -1.07
TRAPPC13-204ENST00000438419 MDM2Q00987 491 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC13-204ENST00000438419 DAXXQ9UER7 740 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC13-204ENST00000438419 HDGFP51858 240 aaKnown RBP8.34□□□□□ -1.07
TRAPPC13-204ENST00000438419 SLC10A3P09131 477 aa8.32□□□□□ -1.08
TRAPPC13-204ENST00000438419 SLF2Q8IX21 1173 aa8.32□□□□□ -1.08
TRAPPC13-204ENST00000438419 WBP1LQ9NX94 342 aa8.32□□□□□ -1.08
TRAPPC13-204ENST00000438419 TSR3Q9UJK0 312 aaKnown RBP8.32□□□□□ -1.08
TRAPPC13-204ENST00000438419 HPS5Q9UPZ3 1129 aa8.32□□□□□ -1.08
TRAPPC13-204ENST00000438419 PDE4DQ08499 809 aa8.31□□□□□ -1.08
TRAPPC13-204ENST00000438419 CLCN1P35523 988 aa8.3□□□□□ -1.08
TRAPPC13-204ENST00000438419 PARP9Q8IXQ6 854 aa8.3□□□□□ -1.08
TRAPPC13-204ENST00000438419 GPCPD1Q9NPB8 672 aa8.3□□□□□ -1.08
TRAPPC13-204ENST00000438419 RNF40O75150 1001 aa8.29□□□□□ -1.08
TRAPPC13-204ENST00000438419 PPP4CP60510 307 aa8.29□□□□□ -1.08
TRAPPC13-204ENST00000438419 DDX11L8A8MPP1 907 aa8.29□□□□□ -1.08
TRAPPC13-204ENST00000438419 NYAP1Q6ZVC0 841 aa8.29□□□□□ -1.08
TRAPPC13-204ENST00000438419 FAM217BQ9NTX9 383 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC13-204ENST00000438419 TTLL12Q14166 644 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC13-204ENST00000438419 PRKD2Q9BZL6 878 aa8.28□□□□□ -1.08
TRAPPC13-204ENST00000438419 APLP1P51693 650 aa8.27□□□□□ -1.09
TRAPPC13-204ENST00000438419 GIGYF2Q6Y7W6 1299 aaKnown RBP8.27□□□□□ -1.09
TRAPPC13-204ENST00000438419 CD46P15529 392 aa8.26□□□□□ -1.09
TRAPPC13-204ENST00000438419 SSTR3P32745 418 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC13-204ENST00000438419 SLC4A3P48751 1232 aa8.26□□□□□ -1.09
TRAPPC13-204ENST00000438419 SULF1Q8IWU6 871 aa8.26□□□□□ -1.09
TRAPPC13-204ENST00000438419 MS4A1P11836 297 aa8.25□□□□□ -1.09
TRAPPC13-204ENST00000438419 GPBP1L1Q9HC44 474 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC13-204ENST00000438419 CFHP08603 1231 aa8.24□□□□□ -1.09
TRAPPC13-204ENST00000438419 RDH13Q8NBN7 331 aa8.24□□□□□ -1.09
TRAPPC13-204ENST00000438419 GCGRP47871 477 aa8.23□□□□□ -1.09
TRAPPC13-204ENST00000438419 LOC100996750A0A140TA64 210 aa8.22□□□□□ -1.09
TRAPPC13-204ENST00000438419 RSPH4AQ5TD94 716 aa8.22□□□□□ -1.09
TRAPPC13-204ENST00000438419 NECTIN2Q92692 538 aa8.22□□□□□ -1.09
TRAPPC13-204ENST00000438419 KRTAP4-6Q9BYQ5 205 aa8.22□□□□□ -1.09
TRAPPC13-204ENST00000438419 ACTN4O43707 911 aaKnown RBP8.21□□□□□ -1.09
TRAPPC13-204ENST00000438419 BRPF1P55201 1214 aaPredicted RBP8.21□□□□□ -1.09
TRAPPC13-204ENST00000438419 KDM4CQ9H3R0 1056 aa8.21□□□□□ -1.09
TRAPPC13-204ENST00000438419 PDZRN3Q9UPQ7 1066 aa8.21□□□□□ -1.09
TRAPPC13-204ENST00000438419 KMT5BQ4FZB7 885 aa8.2□□□□□ -1.1
TRAPPC13-204ENST00000438419 BEGAINQ9BUH8 593 aa8.2□□□□□ -1.1
TRAPPC13-204ENST00000438419 V9GY48 417 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC13-204ENST00000438419 FUT2Q10981 343 aa8.18□□□□□ -1.1
TRAPPC13-204ENST00000438419 NEUROD2Q15784 382 aa8.18□□□□□ -1.1
TRAPPC13-204ENST00000438419 TJAP1Q5JTD0 557 aa8.18□□□□□ -1.1
TRAPPC13-204ENST00000438419 PRR14Q9BWN1 585 aa8.18□□□□□ -1.1
TRAPPC13-204ENST00000438419 KDM4AO75164 1064 aa8.17□□□□□ -1.1
TRAPPC13-204ENST00000438419 PUS10Q3MIT2 529 aaKnown RBP8.16□□□□□ -1.1
TRAPPC13-204ENST00000438419 BLOC1S3Q6QNY0 202 aa8.16□□□□□ -1.1
TRAPPC13-204ENST00000438419 TREML4Q6UXN2 200 aa8.16□□□□□ -1.1
TRAPPC13-204ENST00000438419 SPIRE2Q8WWL2 714 aa8.16□□□□□ -1.1
TRAPPC13-204ENST00000438419 MTRQ99707 1265 aa8.16□□□□□ -1.1
TRAPPC13-204ENST00000438419 FAM117AQ9C073 453 aa8.16□□□□□ -1.1
TRAPPC13-204ENST00000438419 PCDHB3Q9Y5E6 796 aa8.16□□□□□ -1.1
TRAPPC13-204ENST00000438419 ATP6V1AP38606 617 aa8.14□□□□□ -1.11
TRAPPC13-204ENST00000438419 COPS2P61201 443 aa8.14□□□□□ -1.11
TRAPPC13-204ENST00000438419 MORN1Q5T089 497 aa8.14□□□□□ -1.11
TRAPPC13-204ENST00000438419 ZNF516Q92618 1163 aa8.14□□□□□ -1.11
TRAPPC13-204ENST00000438419 HLA-CQ95604 372 aa8.14□□□□□ -1.11
TRAPPC13-204ENST00000438419 STK17AQ9UEE5 414 aa8.14□□□□□ -1.11
TRAPPC13-204ENST00000438419 PLEKHG3A1L390 1219 aa8.13□□□□□ -1.11
TRAPPC13-204ENST00000438419 NUTM1Q86Y26 1132 aa8.13□□□□□ -1.11
TRAPPC13-204ENST00000438419 TBC1D2Q9BYX2 928 aa8.13□□□□□ -1.11
TRAPPC13-204ENST00000438419 HOXA2O43364 376 aa8.12□□□□□ -1.11
TRAPPC13-204ENST00000438419 USP46P62068 366 aa8.12□□□□□ -1.11
TRAPPC13-204ENST00000438419 IL21Q9HBE4 155 aa8.12□□□□□ -1.11
TRAPPC13-204ENST00000438419 SCUBE3Q8IX30 993 aa8.12□□□□□ -1.11
TRAPPC13-204ENST00000438419 SLC27A5Q9Y2P5 690 aa8.12□□□□□ -1.11
TRAPPC13-204ENST00000438419 MOXD2PA6NHM9 499 aa8.11□□□□□ -1.11
TRAPPC13-204ENST00000438419 NDUFV2P19404 249 aa8.11□□□□□ -1.11
TRAPPC13-204ENST00000438419 GUCA2AQ02747 115 aa8.11□□□□□ -1.11
TRAPPC13-204ENST00000438419 ZPR1O75312 459 aa8.1□□□□□ -1.11
TRAPPC13-204ENST00000438419 NKX2-3Q8TAU0 364 aa8.1□□□□□ -1.11
TRAPPC13-204ENST00000438419 POTECB2RU33 542 aa8.09□□□□□ -1.11
TRAPPC13-204ENST00000438419 NR1I2O75469 434 aa8.09□□□□□ -1.11
TRAPPC13-204ENST00000438419 GRIPAP1Q4V328 841 aa8.09□□□□□ -1.11
TRAPPC13-204ENST00000438419 MYSM1Q5VVJ2 828 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms