RNA–Protein interactions for RNA: ENST00000438322.1

LINC00475-207, long intergenic non-protein coding RNA 475, humanhuman

TSL 3 BASIC

Gene LINC00475, Length 424 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-207ENST00000438322 RRBP1Q9P2E9 1410 aaKnown RBP15.86■□□□□ 0.13
LINC00475-207ENST00000438322 XIRP1Q702N8 1843 aaKnown RBP15.85■□□□□ 0.13
LINC00475-207ENST00000438322 TMEM131LA2VDJ0 1609 aa15.85■□□□□ 0.13
LINC00475-207ENST00000438322 SPHKAPQ2M3C7 1700 aa15.84■□□□□ 0.13
LINC00475-207ENST00000438322 RIMS2Q9UQ26 1411 aa15.84■□□□□ 0.13
LINC00475-207ENST00000438322 HSPA1LP34931 641 aa15.83■□□□□ 0.12
LINC00475-207ENST00000438322 RBM33Q96EV2 1170 aaKnown RBP15.83■□□□□ 0.12
LINC00475-207ENST00000438322 TRIM52Q96A61 297 aa15.82■□□□□ 0.12
LINC00475-207ENST00000438322 ALKQ9UM73 1620 aa15.8■□□□□ 0.12
LINC00475-207ENST00000438322 NAIPQ13075 1403 aa15.79■□□□□ 0.12
LINC00475-207ENST00000438322 PROSER2Q86WR7 435 aaPredicted RBP15.79■□□□□ 0.12
LINC00475-207ENST00000438322 ZFYVE9O95405 1425 aa15.78■□□□□ 0.12
LINC00475-207ENST00000438322 ZNF326Q5BKZ1 582 aaKnown RBP15.78■□□□□ 0.12
LINC00475-207ENST00000438322 TMEM94Q12767 1356 aa15.77■□□□□ 0.12
LINC00475-207ENST00000438322 HDGFP51858 240 aaKnown RBP15.77■□□□□ 0.12
LINC00475-207ENST00000438322 PLEKHG1Q9ULL1 1385 aa15.76■□□□□ 0.11
LINC00475-207ENST00000438322 KCNA6P17658 529 aa15.76■□□□□ 0.11
LINC00475-207ENST00000438322 CHD2O14647 1828 aaKnown RBP15.75■□□□□ 0.11
LINC00475-207ENST00000438322 KIF1BO60333 1816 aa15.75■□□□□ 0.11
LINC00475-207ENST00000438322 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.75■□□□□ 0.11
LINC00475-207ENST00000438322 CLTCL1P53675 1640 aa15.75■□□□□ 0.11
LINC00475-207ENST00000438322 NWD1Q149M9 1564 aa15.74■□□□□ 0.11
LINC00475-207ENST00000438322 ILDR2Q71H61 639 aa15.73■□□□□ 0.11
LINC00475-207ENST00000438322 C14orf37Q86TY3 774 aa15.73■□□□□ 0.11
LINC00475-207ENST00000438322 HFM1A2PYH4 1435 aa15.72■□□□□ 0.11
LINC00475-207ENST00000438322 NKTRP30414 1462 aaKnown RBP15.71■□□□□ 0.11
LINC00475-207ENST00000438322 MED1Q15648 1581 aaPredicted RBP15.7■□□□□ 0.1
LINC00475-207ENST00000438322 TRPM2O94759 1503 aa15.7■□□□□ 0.1
LINC00475-207ENST00000438322 SLC4A1APQ9BWU0 796 aaKnown RBP15.7■□□□□ 0.1
LINC00475-207ENST00000438322 ROBO1Q9Y6N7 1651 aa15.69■□□□□ 0.1
LINC00475-207ENST00000438322 DIP2AQ14689 1571 aa15.68■□□□□ 0.1
LINC00475-207ENST00000438322 MSH6P52701 1360 aa15.68■□□□□ 0.1
LINC00475-207ENST00000438322 ADAMTS13Q76LX8 1427 aa15.68■□□□□ 0.1
LINC00475-207ENST00000438322 FOXD1Q16676 465 aa15.67■□□□□ 0.1
LINC00475-207ENST00000438322 TBX22Q9Y458 520 aa15.67■□□□□ 0.1
LINC00475-207ENST00000438322 NRXN3Q9Y4C0 1643 aa15.66■□□□□ 0.1
LINC00475-207ENST00000438322 PHF23Q9BUL5 403 aaPredicted RBP15.66■□□□□ 0.1
LINC00475-207ENST00000438322 NEXMIFQ5QGS0 1516 aa15.64■□□□□ 0.09
LINC00475-207ENST00000438322 AMOTL2Q9Y2J4 779 aa15.63■□□□□ 0.09
LINC00475-207ENST00000438322 PHLPP1O60346 1717 aa15.63■□□□□ 0.09
LINC00475-207ENST00000438322 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.63■□□□□ 0.09
LINC00475-207ENST00000438322 TRIM26Q12899 539 aaPredicted RBP15.62■□□□□ 0.09
LINC00475-207ENST00000438322 SETBP1Q9Y6X0 1596 aa15.62■□□□□ 0.09
LINC00475-207ENST00000438322 PTPRUQ92729 1446 aa15.61■□□□□ 0.09
LINC00475-207ENST00000438322 SLAIN2Q9P270 581 aa15.6■□□□□ 0.09
LINC00475-207ENST00000438322 XRN1Q8IZH2 1706 aaKnown RBP15.6■□□□□ 0.09
LINC00475-207ENST00000438322 FAM135BQ49AJ0 1406 aa15.6■□□□□ 0.09
LINC00475-207ENST00000438322 PPLO60437 1756 aa15.59■□□□□ 0.09
LINC00475-207ENST00000438322 ATF3P18847 181 aa15.59■□□□□ 0.09
LINC00475-207ENST00000438322 PIK3R4Q99570 1358 aa15.59■□□□□ 0.09
LINC00475-207ENST00000438322 METP08581 1390 aa15.58■□□□□ 0.08
LINC00475-207ENST00000438322 RGL3Q3MIN7 710 aa15.57■□□□□ 0.08
LINC00475-207ENST00000438322 MPHOSPH9Q99550 1183 aa15.57■□□□□ 0.08
LINC00475-207ENST00000438322 CCDC144AA2RUR9 1427 aa15.57■□□□□ 0.08
LINC00475-207ENST00000438322 SOCS7O14512 581 aa15.56■□□□□ 0.08
LINC00475-207ENST00000438322 ACIN1Q9UKV3 1341 aaKnown RBP15.56■□□□□ 0.08
LINC00475-207ENST00000438322 SETD5Q9C0A6 1442 aa15.55■□□□□ 0.08
LINC00475-207ENST00000438322 C19orf44Q9H6X5 657 aa15.55■□□□□ 0.08
LINC00475-207ENST00000438322 NALCNQ8IZF0 1738 aa15.54■□□□□ 0.08
LINC00475-207ENST00000438322 VGFO15240 615 aaPredicted RBP15.54■□□□□ 0.08
LINC00475-207ENST00000438322 CADPS2Q86UW7 1296 aa15.54■□□□□ 0.08
LINC00475-207ENST00000438322 SETD1AO15047 1707 aaKnown RBP15.54■□□□□ 0.08
LINC00475-207ENST00000438322 NCOA3Q9Y6Q9 1424 aa15.52■□□□□ 0.08
LINC00475-207ENST00000438322 IFT172Q9UG01 1749 aa15.51■□□□□ 0.07
LINC00475-207ENST00000438322 COL16A1Q07092 1604 aaPredicted RBP15.5■□□□□ 0.07
LINC00475-207ENST00000438322 RAB3GAP2Q9H2M9 1393 aa15.5■□□□□ 0.07
LINC00475-207ENST00000438322 RPGRIP1LQ68CZ1 1315 aa15.49■□□□□ 0.07
LINC00475-207ENST00000438322 ADGRF5Q8IZF2 1346 aa15.48■□□□□ 0.07
LINC00475-207ENST00000438322 HRCP23327 699 aa15.48■□□□□ 0.07
LINC00475-207ENST00000438322 STK26Q9P289 416 aa15.48■□□□□ 0.07
LINC00475-207ENST00000438322 ADGRL3Q9HAR2 1447 aa15.48■□□□□ 0.07
LINC00475-207ENST00000438322 BRINP3Q76B58 766 aa15.47■□□□□ 0.07
LINC00475-207ENST00000438322 JCADQ9P266 1359 aa15.47■□□□□ 0.07
LINC00475-207ENST00000438322 MST1RQ04912 1400 aa15.46■□□□□ 0.07
LINC00475-207ENST00000438322 ASXL1Q8IXJ9 1541 aa15.46■□□□□ 0.07
LINC00475-207ENST00000438322 ROBO2Q9HCK4 1378 aa15.46■□□□□ 0.07
LINC00475-207ENST00000438322 AHDC1Q5TGY3 1603 aaPredicted RBP15.46■□□□□ 0.06
LINC00475-207ENST00000438322 DCCP43146 1447 aa15.45■□□□□ 0.06
LINC00475-207ENST00000438322 SPATA31E1Q6ZUB1 1445 aa15.45■□□□□ 0.06
LINC00475-207ENST00000438322 MEX3CQ5U5Q3 659 aaKnown RBP15.45■□□□□ 0.06
LINC00475-207ENST00000438322 DDX17Q92841 729 aaKnown RBP15.45■□□□□ 0.06
LINC00475-207ENST00000438322 NUTM2BA6NNL0 878 aaPredicted RBP15.44■□□□□ 0.06
LINC00475-207ENST00000438322 NUTM2EB1AL46 878 aaPredicted RBP15.44■□□□□ 0.06
LINC00475-207ENST00000438322 NUTM2AQ8IVF1 878 aaPredicted RBP15.44■□□□□ 0.06
LINC00475-207ENST00000438322 PTCH1Q13635 1447 aa15.43■□□□□ 0.06
LINC00475-207ENST00000438322 TMEM132EQ6IEE7 984 aa15.43■□□□□ 0.06
LINC00475-207ENST00000438322 NHSL1Q5SYE7 1610 aa15.43■□□□□ 0.06
LINC00475-207ENST00000438322 SHPRHQ149N8 1683 aa15.42■□□□□ 0.06
LINC00475-207ENST00000438322 ANKRD30BQ9BXX2 1392 aa15.42■□□□□ 0.06
LINC00475-207ENST00000438322 PCGF6Q9BYE7 350 aa15.42■□□□□ 0.06
LINC00475-207ENST00000438322 RGS17Q9UGC6 210 aaPredicted RBP15.42■□□□□ 0.06
LINC00475-207ENST00000438322 LRP6O75581 1613 aa15.4■□□□□ 0.06
LINC00475-207ENST00000438322 NUTM2FA1L443 756 aa15.4■□□□□ 0.06
LINC00475-207ENST00000438322 POTEAQ6S8J7 498 aa15.39■□□□□ 0.05
LINC00475-207ENST00000438322 WAPLQ7Z5K2 1190 aa15.39■□□□□ 0.05
LINC00475-207ENST00000438322 C1orf167Q5SNV9 1468 aa15.39■□□□□ 0.05
LINC00475-207ENST00000438322 PIK3C2GO75747 1445 aa15.38■□□□□ 0.05
LINC00475-207ENST00000438322 KNDC1Q76NI1 1749 aa15.37■□□□□ 0.05
LINC00475-207ENST00000438322 ORAI2Q96SN7 254 aa15.37■□□□□ 0.05
LINC00475-207ENST00000438322 KDM2AQ9Y2K7 1162 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms