RNA–Protein interactions for RNA: ENST00000438265.5

RPE-211, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-211ENST00000438265 KANK1Q14678 1352 aa12.76□□□□□ -0.37
RPE-211ENST00000438265 NRXN3Q9Y4C0 1643 aa12.75□□□□□ -0.37
RPE-211ENST00000438265 SPHKAPQ2M3C7 1700 aa12.74□□□□□ -0.37
RPE-211ENST00000438265 RPRD2Q5VT52 1461 aaKnown RBP12.73□□□□□ -0.37
RPE-211ENST00000438265 TMEM94Q12767 1356 aa12.73□□□□□ -0.37
RPE-211ENST00000438265 RGS17Q9UGC6 210 aaPredicted RBP12.73□□□□□ -0.37
RPE-211ENST00000438265 PHLPP1O60346 1717 aa12.73□□□□□ -0.37
RPE-211ENST00000438265 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.73□□□□□ -0.37
RPE-211ENST00000438265 RIMS2Q9UQ26 1411 aa12.71□□□□□ -0.37
RPE-211ENST00000438265 SETD1AO15047 1707 aaKnown RBP12.71□□□□□ -0.37
RPE-211ENST00000438265 EID1Q9Y6B2 187 aa12.71□□□□□ -0.37
RPE-211ENST00000438265 ADAMTS13Q76LX8 1427 aa12.71□□□□□ -0.38
RPE-211ENST00000438265 NUTM2DQ5VT03 806 aaPredicted RBP12.7□□□□□ -0.38
RPE-211ENST00000438265 STAG3Q9UJ98 1225 aa12.7□□□□□ -0.38
RPE-211ENST00000438265 NKTRP30414 1462 aaKnown RBP12.7□□□□□ -0.38
RPE-211ENST00000438265 KCNA6P17658 529 aa12.69□□□□□ -0.38
RPE-211ENST00000438265 CLTCL1P53675 1640 aa12.69□□□□□ -0.38
RPE-211ENST00000438265 COL16A1Q07092 1604 aaPredicted RBP12.69□□□□□ -0.38
RPE-211ENST00000438265 FAM135BQ49AJ0 1406 aa12.68□□□□□ -0.38
RPE-211ENST00000438265 PTPRUQ92729 1446 aa12.68□□□□□ -0.38
RPE-211ENST00000438265 PLEKHG1Q9ULL1 1385 aa12.68□□□□□ -0.38
RPE-211ENST00000438265 XRN1Q8IZH2 1706 aaKnown RBP12.67□□□□□ -0.38
RPE-211ENST00000438265 ROCK1Q13464 1354 aa12.67□□□□□ -0.38
RPE-211ENST00000438265 RRBP1Q9P2E9 1410 aaKnown RBP12.66□□□□□ -0.38
RPE-211ENST00000438265 PROSER2Q86WR7 435 aaPredicted RBP12.66□□□□□ -0.38
RPE-211ENST00000438265 SLC52A1Q9NWF4 448 aa12.66□□□□□ -0.38
RPE-211ENST00000438265 ITGAEP38570 1179 aa12.65□□□□□ -0.38
RPE-211ENST00000438265 KIF1BO60333 1816 aa12.65□□□□□ -0.39
RPE-211ENST00000438265 NALCNQ8IZF0 1738 aa12.64□□□□□ -0.39
RPE-211ENST00000438265 DIP2AQ14689 1571 aa12.63□□□□□ -0.39
RPE-211ENST00000438265 NUP155O75694 1391 aa12.62□□□□□ -0.39
RPE-211ENST00000438265 CHGAP10645 457 aaKnown RBP12.62□□□□□ -0.39
RPE-211ENST00000438265 POTEAQ6S8J7 498 aa12.62□□□□□ -0.39
RPE-211ENST00000438265 LRP6O75581 1613 aa12.62□□□□□ -0.39
RPE-211ENST00000438265 NEXMIFQ5QGS0 1516 aa12.62□□□□□ -0.39
RPE-211ENST00000438265 SETBP1Q9Y6X0 1596 aa12.61□□□□□ -0.39
RPE-211ENST00000438265 PHF23Q9BUL5 403 aaPredicted RBP12.61□□□□□ -0.39
RPE-211ENST00000438265 SHPRHQ149N8 1683 aa12.61□□□□□ -0.39
RPE-211ENST00000438265 TRPM2O94759 1503 aa12.6□□□□□ -0.39
RPE-211ENST00000438265 NHSL1Q5SYE7 1610 aa12.59□□□□□ -0.39
RPE-211ENST00000438265 AHDC1Q5TGY3 1603 aaPredicted RBP12.59□□□□□ -0.39
RPE-211ENST00000438265 PPLO60437 1756 aa12.59□□□□□ -0.39
RPE-211ENST00000438265 BCANQ96GW7 911 aa12.59□□□□□ -0.39
RPE-211ENST00000438265 MSH6P52701 1360 aa12.58□□□□□ -0.4
RPE-211ENST00000438265 NAIPQ13075 1403 aa12.58□□□□□ -0.4
RPE-211ENST00000438265 TBX22Q9Y458 520 aa12.58□□□□□ -0.4
RPE-211ENST00000438265 PPP1R15AO75807 674 aaPredicted RBP12.57□□□□□ -0.4
RPE-211ENST00000438265 SLAIN2Q9P270 581 aa12.57□□□□□ -0.4
RPE-211ENST00000438265 METP08581 1390 aa12.56□□□□□ -0.4
RPE-211ENST00000438265 IFT172Q9UG01 1749 aa12.54□□□□□ -0.4
RPE-211ENST00000438265 AMOTL2Q9Y2J4 779 aa12.53□□□□□ -0.4
RPE-211ENST00000438265 ASXL1Q8IXJ9 1541 aa12.52□□□□□ -0.4
RPE-211ENST00000438265 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.52□□□□□ -0.41
RPE-211ENST00000438265 PIK3R4Q99570 1358 aa12.52□□□□□ -0.41
RPE-211ENST00000438265 MST1RQ04912 1400 aa12.52□□□□□ -0.41
RPE-211ENST00000438265 NCOA3Q9Y6Q9 1424 aa12.52□□□□□ -0.41
RPE-211ENST00000438265 DDX17Q92841 729 aaKnown RBP12.51□□□□□ -0.41
RPE-211ENST00000438265 JCADQ9P266 1359 aa12.51□□□□□ -0.41
RPE-211ENST00000438265 BRINP3Q76B58 766 aa12.5□□□□□ -0.41
RPE-211ENST00000438265 RGPD8O14715 1765 aaPredicted RBP12.49□□□□□ -0.41
RPE-211ENST00000438265 LAMC1P11047 1609 aa12.49□□□□□ -0.41
RPE-211ENST00000438265 C19orf44Q9H6X5 657 aa12.48□□□□□ -0.41
RPE-211ENST00000438265 HFM1A2PYH4 1435 aa12.47□□□□□ -0.41
RPE-211ENST00000438265 HDGFP51858 240 aaKnown RBP12.47□□□□□ -0.41
RPE-211ENST00000438265 FOXD1Q16676 465 aa12.47□□□□□ -0.41
RPE-211ENST00000438265 ZNF326Q5BKZ1 582 aaKnown RBP12.47□□□□□ -0.41
RPE-211ENST00000438265 C14orf37Q86TY3 774 aa12.47□□□□□ -0.41
RPE-211ENST00000438265 DCCP43146 1447 aa12.46□□□□□ -0.41
RPE-211ENST00000438265 ADGRL3Q9HAR2 1447 aa12.46□□□□□ -0.41
RPE-211ENST00000438265 ROBO2Q9HCK4 1378 aa12.45□□□□□ -0.42
RPE-211ENST00000438265 MARF1Q9Y4F3 1742 aaKnown RBP12.45□□□□□ -0.42
RPE-211ENST00000438265 ACIN1Q9UKV3 1341 aaKnown RBP12.44□□□□□ -0.42
RPE-211ENST00000438265 ATF3P18847 181 aa12.44□□□□□ -0.42
RPE-211ENST00000438265 CADPS2Q86UW7 1296 aa12.44□□□□□ -0.42
RPE-211ENST00000438265 SETD5Q9C0A6 1442 aa12.43□□□□□ -0.42
RPE-211ENST00000438265 KNDC1Q76NI1 1749 aa12.42□□□□□ -0.42
RPE-211ENST00000438265 C1orf167Q5SNV9 1468 aa12.42□□□□□ -0.42
RPE-211ENST00000438265 PNPLA6Q8IY17 1366 aa12.41□□□□□ -0.42
RPE-211ENST00000438265 SPATA31A6Q5VVP1 1343 aa12.4□□□□□ -0.42
RPE-211ENST00000438265 PTCH1Q13635 1447 aa12.4□□□□□ -0.42
RPE-211ENST00000438265 PRAG1Q86YV5 1406 aa12.4□□□□□ -0.42
RPE-211ENST00000438265 EP400Q96L91 3159 aa12.4□□□□□ -0.42
RPE-211ENST00000438265 NUTM2BA6NNL0 878 aaPredicted RBP12.4□□□□□ -0.42
RPE-211ENST00000438265 NUTM2EB1AL46 878 aaPredicted RBP12.4□□□□□ -0.42
RPE-211ENST00000438265 NUTM2AQ8IVF1 878 aaPredicted RBP12.4□□□□□ -0.42
RPE-211ENST00000438265 TRIM52Q96A61 297 aa12.4□□□□□ -0.42
RPE-211ENST00000438265 SPATA31E1Q6ZUB1 1445 aa12.39□□□□□ -0.43
RPE-211ENST00000438265 ORAI2Q96SN7 254 aa12.39□□□□□ -0.43
RPE-211ENST00000438265 COL22A1Q8NFW1 1626 aaPredicted RBP12.39□□□□□ -0.43
RPE-211ENST00000438265 FMN2Q9NZ56 1722 aa12.39□□□□□ -0.43
RPE-211ENST00000438265 ADGRF5Q8IZF2 1346 aa12.38□□□□□ -0.43
RPE-211ENST00000438265 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
RPE-211ENST00000438265 PLEKHH1Q9ULM0 1364 aa12.37□□□□□ -0.43
RPE-211ENST00000438265 CDC42BPGQ6DT37 1551 aa12.37□□□□□ -0.43
RPE-211ENST00000438265 AFF2P51816 1311 aa12.37□□□□□ -0.43
RPE-211ENST00000438265 MEX3CQ5U5Q3 659 aaKnown RBP12.36□□□□□ -0.43
RPE-211ENST00000438265 RGS12O14924 1447 aa12.36□□□□□ -0.43
RPE-211ENST00000438265 PXDNQ92626 1479 aa12.35□□□□□ -0.43
RPE-211ENST00000438265 BRWD3Q6RI45 1802 aa12.35□□□□□ -0.43
RPE-211ENST00000438265 ABCA3Q99758 1704 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms