RNA–Protein interactions for RNA: ENST00000438015.5

CHEK1-204, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHEK1, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-204ENST00000438015 MRE11P49959 708 aa13.75□□□□□ -0.21
CHEK1-204ENST00000438015 GRPEL1Q9HAV7 217 aa13.75□□□□□ -0.21
CHEK1-204ENST00000438015 UNC13AQ9UPW8 1703 aa13.75□□□□□ -0.21
CHEK1-204ENST00000438015 MCTP1Q6DN14 999 aa13.74□□□□□ -0.21
CHEK1-204ENST00000438015 MTHFSP49914 203 aa13.74□□□□□ -0.21
CHEK1-204ENST00000438015 TMEM132EQ6IEE7 984 aa13.74□□□□□ -0.21
CHEK1-204ENST00000438015 DISP3Q9P2K9 1392 aa13.73□□□□□ -0.21
CHEK1-204ENST00000438015 DMRT2Q9Y5R5 561 aa13.73□□□□□ -0.21
CHEK1-204ENST00000438015 SLC12A5Q9H2X9 1139 aa13.73□□□□□ -0.21
CHEK1-204ENST00000438015 A0A0U1RQG5 324 aaPredicted RBP13.73□□□□□ -0.21
CHEK1-204ENST00000438015 PCDHB15Q9Y5E8 787 aa13.73□□□□□ -0.21
CHEK1-204ENST00000438015 PLEKHH1Q9ULM0 1364 aa13.72□□□□□ -0.21
CHEK1-204ENST00000438015 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
CHEK1-204ENST00000438015 CAVIN1Q6NZI2 390 aaKnown RBP13.72□□□□□ -0.21
CHEK1-204ENST00000438015 NASPP49321 788 aaPredicted RBP13.71□□□□□ -0.21
CHEK1-204ENST00000438015 EXOSC9Q06265 439 aaKnown RBP13.71□□□□□ -0.21
CHEK1-204ENST00000438015 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.71□□□□□ -0.211e-6■■■■■ 28.9
CHEK1-204ENST00000438015 WWC1Q8IX03 1113 aa13.71□□□□□ -0.21
CHEK1-204ENST00000438015 KIAA1211Q6ZU35 1233 aa13.7□□□□□ -0.22
CHEK1-204ENST00000438015 BIVM-ERCC5R4GMW8 1640 aa13.7□□□□□ -0.22
CHEK1-204ENST00000438015 EPRSP07814 1512 aaKnown RBP13.7□□□□□ -0.22
CHEK1-204ENST00000438015 EHBP1L1Q8N3D4 1523 aa13.7□□□□□ -0.22
CHEK1-204ENST00000438015 SUPT6HQ7KZ85 1726 aaKnown RBP13.69□□□□□ -0.22
CHEK1-204ENST00000438015 IPO8O15397 1037 aaKnown RBP13.69□□□□□ -0.22
CHEK1-204ENST00000438015 RLBP1P12271 317 aa13.69□□□□□ -0.22
CHEK1-204ENST00000438015 GGNBP2Q9H3C7 697 aa13.69□□□□□ -0.22
CHEK1-204ENST00000438015 PDE3AQ14432 1141 aa13.68□□□□□ -0.22
CHEK1-204ENST00000438015 PER1O15534 1290 aaPredicted RBP13.68□□□□□ -0.22
CHEK1-204ENST00000438015 CASC1Q6TDU7 716 aa13.68□□□□□ -0.22
CHEK1-204ENST00000438015 SLC4A10Q6U841 1118 aa13.68□□□□□ -0.22
CHEK1-204ENST00000438015 EFCAB5A4FU69 1503 aa13.68□□□□□ -0.22
CHEK1-204ENST00000438015 TOPBP1Q92547 1522 aa13.68□□□□□ -0.22
CHEK1-204ENST00000438015 RUNDC1Q96C34 613 aa13.67□□□□□ -0.22
CHEK1-204ENST00000438015 RIPK4P57078 832 aa13.67□□□□□ -0.22
CHEK1-204ENST00000438015 HMOX1P09601 288 aa13.66□□□□□ -0.22
CHEK1-204ENST00000438015 NOB1Q9ULX3 412 aaKnown RBP13.66□□□□□ -0.22
CHEK1-204ENST00000438015 ERBINQ96RT1 1412 aa13.66□□□□□ -0.22
CHEK1-204ENST00000438015 AFAP1Q8N556 730 aa13.65□□□□□ -0.22
CHEK1-204ENST00000438015 PRDM10Q9NQV6 1147 aa13.65□□□□□ -0.22
CHEK1-204ENST00000438015 RARSP54136 660 aaKnown RBP13.65□□□□□ -0.22
CHEK1-204ENST00000438015 RBM42Q9BTD8 480 aaKnown RBP13.65□□□□□ -0.22
CHEK1-204ENST00000438015 KDM2BQ8NHM5 1336 aa13.65□□□□□ -0.22
CHEK1-204ENST00000438015 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.64□□□□□ -0.23
CHEK1-204ENST00000438015 PRPF40AO75400 957 aaKnown RBP13.64□□□□□ -0.23
CHEK1-204ENST00000438015 DDX19BQ9UMR2 479 aa13.64□□□□□ -0.23
CHEK1-204ENST00000438015 CHMP3Q9Y3E7 222 aa13.64□□□□□ -0.23
CHEK1-204ENST00000438015 NUTM2FA1L443 756 aa13.64□□□□□ -0.23
CHEK1-204ENST00000438015 LRPPRCP42704 1394 aaKnown RBP13.64□□□□□ -0.23
CHEK1-204ENST00000438015 KDM6BO15054 1643 aa13.64□□□□□ -0.23
CHEK1-204ENST00000438015 TBC1D32Q96NH3 1257 aa13.64□□□□□ -0.23
CHEK1-204ENST00000438015 TNPO1Q92973 898 aaKnown RBP13.63□□□□□ -0.23
CHEK1-204ENST00000438015 CABP2Q9NPB3 220 aa13.63□□□□□ -0.23
CHEK1-204ENST00000438015 SPATA31E1Q6ZUB1 1445 aa13.63□□□□□ -0.23
CHEK1-204ENST00000438015 TRIM6-TRIM34B2RNG4 842 aa13.63□□□□□ -0.23
CHEK1-204ENST00000438015 XPCQ01831 940 aaPredicted RBP13.62□□□□□ -0.23
CHEK1-204ENST00000438015 C9orf84Q5VXU9 1444 aa13.62□□□□□ -0.23
CHEK1-204ENST00000438015 SSFA2P28290 1259 aa13.62□□□□□ -0.23
CHEK1-204ENST00000438015 THUMPD2Q9BTF0 503 aaKnown RBP13.62□□□□□ -0.23
CHEK1-204ENST00000438015 MVPQ14764 893 aaKnown RBP13.61□□□□□ -0.23
CHEK1-204ENST00000438015 THOC2Q8NI27 1593 aaKnown RBP13.61□□□□□ -0.23
CHEK1-204ENST00000438015 TMEM57Q8N5G2 664 aa13.61□□□□□ -0.23
CHEK1-204ENST00000438015 TESK2Q96S53 571 aa13.61□□□□□ -0.23
CHEK1-204ENST00000438015 PEG3Q9GZU2 1588 aa13.61□□□□□ -0.23
CHEK1-204ENST00000438015 PARD3Q8TEW0 1356 aa13.61□□□□□ -0.23
CHEK1-204ENST00000438015 SPAG9O60271 1321 aaKnown RBP13.6□□□□□ -0.23
CHEK1-204ENST00000438015 MINK1Q8N4C8 1332 aaPredicted RBP13.6□□□□□ -0.23
CHEK1-204ENST00000438015 CARMIL2Q6F5E8 1435 aa13.59□□□□□ -0.23
CHEK1-204ENST00000438015 KIAA2012Q0VF49 1180 aa13.59□□□□□ -0.23
CHEK1-204ENST00000438015 SKOR2Q2VWA4 1001 aaPredicted RBP13.59□□□□□ -0.23
CHEK1-204ENST00000438015 NECTIN2Q92692 538 aa13.59□□□□□ -0.23
CHEK1-204ENST00000438015 RILPL2Q969X0 211 aa13.59□□□□□ -0.23
CHEK1-204ENST00000438015 RRP9O43818 475 aaKnown RBP13.59□□□□□ -0.23
CHEK1-204ENST00000438015 DRC7Q8IY82 874 aa13.59□□□□□ -0.23
CHEK1-204ENST00000438015 SSH1Q8WYL5 1049 aa13.59□□□□□ -0.23
CHEK1-204ENST00000438015 ROCK1Q13464 1354 aa13.59□□□□□ -0.23
CHEK1-204ENST00000438015 TEX14Q8IWB6 1497 aa13.59□□□□□ -0.23
CHEK1-204ENST00000438015 EFCAB2Q5VUJ9 269 aa13.59□□□□□ -0.23
CHEK1-204ENST00000438015 SNAPC4Q5SXM2 1469 aa13.58□□□□□ -0.24
CHEK1-204ENST00000438015 PLB1Q6P1J6 1458 aa13.58□□□□□ -0.24
CHEK1-204ENST00000438015 FBLN1P23142 703 aa13.57□□□□□ -0.24
CHEK1-204ENST00000438015 ERCC6Q03468 1493 aa13.57□□□□□ -0.24
CHEK1-204ENST00000438015 EIF3AQ14152 1382 aaKnown RBP13.57□□□□□ -0.24
CHEK1-204ENST00000438015 NKTRP30414 1462 aaKnown RBP13.57□□□□□ -0.24
CHEK1-204ENST00000438015 C14orf37Q86TY3 774 aa13.57□□□□□ -0.24
CHEK1-204ENST00000438015 ST18O60284 1047 aa13.56□□□□□ -0.24
CHEK1-204ENST00000438015 CLCN1P35523 988 aa13.56□□□□□ -0.24
CHEK1-204ENST00000438015 MLECQ14165 292 aa13.56□□□□□ -0.24
CHEK1-204ENST00000438015 ATF7IPQ6VMQ6 1270 aa13.56□□□□□ -0.24
CHEK1-204ENST00000438015 TRIM27P14373 513 aa13.56□□□□□ -0.24
CHEK1-204ENST00000438015 GRIN2BQ13224 1484 aa13.56□□□□□ -0.24
CHEK1-204ENST00000438015 RBM27Q9P2N5 1060 aaKnown RBP13.55□□□□□ -0.24
CHEK1-204ENST00000438015 UGGT2Q9NYU1 1516 aa13.55□□□□□ -0.24
CHEK1-204ENST00000438015 KCNJ4P48050 445 aa13.55□□□□□ -0.24
CHEK1-204ENST00000438015 CAMSAP2Q08AD1 1489 aa13.54□□□□□ -0.24
CHEK1-204ENST00000438015 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.54□□□□□ -0.24
CHEK1-204ENST00000438015 ZNF428Q96B54 188 aa13.54□□□□□ -0.24
CHEK1-204ENST00000438015 UQCRHLA0A096LP55 91 aa13.54□□□□□ -0.24
CHEK1-204ENST00000438015 UQCRHP07919 91 aa13.54□□□□□ -0.24
CHEK1-204ENST00000438015 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
CHEK1-204ENST00000438015 SYCE3A1L190 88 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms