RNA–Protein interactions for RNA: ENST00000437974.5

ARHGEF28-204, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARHGEF28, Length 5,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-204ENST00000437974 VPS37DQ86XT2 251 aa22.5■■□□□ 1.19
ARHGEF28-204ENST00000437974 DIAPH3Q9NSV4 1193 aa22.49■■□□□ 1.19
ARHGEF28-204ENST00000437974 RAD21O60216 631 aa22.49■■□□□ 1.19
ARHGEF28-204ENST00000437974 RAPGEF4Q8WZA2 1011 aa22.48■■□□□ 1.19
ARHGEF28-204ENST00000437974 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
ARHGEF28-204ENST00000437974 SLC4A3P48751 1232 aa22.47■■□□□ 1.19
ARHGEF28-204ENST00000437974 TCEAL9Q9UHQ7 104 aa22.47■■□□□ 1.19
ARHGEF28-204ENST00000437974 PHF14O94880 888 aa22.46■■□□□ 1.19
ARHGEF28-204ENST00000437974 NECTIN2Q92692 538 aa22.46■■□□□ 1.19
ARHGEF28-204ENST00000437974 ARID3AQ99856 593 aa22.46■■□□□ 1.19
ARHGEF28-204ENST00000437974 FAM161AQ3B820 660 aa22.46■■□□□ 1.19
ARHGEF28-204ENST00000437974 CPLX2Q6PUV4 134 aaKnown RBP22.46■■□□□ 1.19
ARHGEF28-204ENST00000437974 RUFY2Q8WXA3 655 aa22.46■■□□□ 1.19
ARHGEF28-204ENST00000437974 FBXW7Q969H0 707 aa22.46■■□□□ 1.19
ARHGEF28-204ENST00000437974 TPD52L1Q16890 204 aaPredicted RBP22.44■■□□□ 1.18
ARHGEF28-204ENST00000437974 TPM3P06753 285 aa22.44■■□□□ 1.18
ARHGEF28-204ENST00000437974 RIPK4P57078 832 aa22.44■■□□□ 1.18
ARHGEF28-204ENST00000437974 FOXD4L5Q5VV16 416 aaPredicted RBP22.44■■□□□ 1.18
ARHGEF28-204ENST00000437974 FOXD4L4Q8WXT5 416 aaPredicted RBP22.44■■□□□ 1.18
ARHGEF28-204ENST00000437974 IFIT2P09913 472 aaKnown RBP22.44■■□□□ 1.18
ARHGEF28-204ENST00000437974 PES1O00541 588 aaKnown RBP22.43■■□□□ 1.18
ARHGEF28-204ENST00000437974 MYOM3Q5VTT5 1437 aa22.43■■□□□ 1.18
ARHGEF28-204ENST00000437974 API5Q9BZZ5 524 aaKnown RBP22.43■■□□□ 1.18
ARHGEF28-204ENST00000437974 APPP05067 770 aa22.42■■□□□ 1.18
ARHGEF28-204ENST00000437974 APAF1O14727 1248 aa22.42■■□□□ 1.18
ARHGEF28-204ENST00000437974 A0A0U1RQG5 324 aaPredicted RBP22.42■■□□□ 1.18
ARHGEF28-204ENST00000437974 KLHL34Q8N239 644 aa22.42■■□□□ 1.18
ARHGEF28-204ENST00000437974 COG6Q9Y2V7 657 aa22.41■■□□□ 1.18
ARHGEF28-204ENST00000437974 G3BP1Q13283 466 aaKnown RBP eCLIP22.41■■□□□ 1.18
ARHGEF28-204ENST00000437974 FKBP5Q13451 457 aaPredicted RBP22.4■■□□□ 1.18
ARHGEF28-204ENST00000437974 NLRP2Q9NX02 1062 aa22.4■■□□□ 1.18
ARHGEF28-204ENST00000437974 ATP6V1DQ9Y5K8 247 aa22.4■■□□□ 1.18
ARHGEF28-204ENST00000437974 STAC3Q96MF2 364 aa22.4■■□□□ 1.18
ARHGEF28-204ENST00000437974 TRIM29Q14134 588 aa22.39■■□□□ 1.17
ARHGEF28-204ENST00000437974 PHF23Q9BUL5 403 aaPredicted RBP22.39■■□□□ 1.17
ARHGEF28-204ENST00000437974 DHX16O60231 1041 aaKnown RBP22.38■■□□□ 1.17
ARHGEF28-204ENST00000437974 ZKSCAN1P17029 563 aaPredicted RBP22.38■■□□□ 1.17
ARHGEF28-204ENST00000437974 RBM33Q96EV2 1170 aaKnown RBP22.38■■□□□ 1.17
ARHGEF28-204ENST00000437974 DDX19BQ9UMR2 479 aa22.38■■□□□ 1.17
ARHGEF28-204ENST00000437974 TSPYL4Q9UJ04 414 aa22.38■■□□□ 1.17
ARHGEF28-204ENST00000437974 ROCK1Q13464 1354 aa22.37■■□□□ 1.17
ARHGEF28-204ENST00000437974 TSR1Q2NL82 804 aaKnown RBP22.37■■□□□ 1.17
ARHGEF28-204ENST00000437974 MCTP1Q6DN14 999 aa22.37■■□□□ 1.17
ARHGEF28-204ENST00000437974 TPM2P07951 284 aa22.37■■□□□ 1.17
ARHGEF28-204ENST00000437974 FGD5Q6ZNL6 1462 aa22.36■■□□□ 1.17
ARHGEF28-204ENST00000437974 TRDNQ13061 729 aa22.36■■□□□ 1.17
ARHGEF28-204ENST00000437974 MIA2Q96PC5 1412 aa22.36■■□□□ 1.17
ARHGEF28-204ENST00000437974 DDX11L8A8MPP1 907 aa22.35■■□□□ 1.17
ARHGEF28-204ENST00000437974 CWC22Q9HCG8 908 aaKnown RBP22.35■■□□□ 1.17
ARHGEF28-204ENST00000437974 CPLX1O14810 134 aa22.34■■□□□ 1.17
ARHGEF28-204ENST00000437974 GNAI1P63096 354 aa22.34■■□□□ 1.17
ARHGEF28-204ENST00000437974 REC8O95072 547 aa22.33■■□□□ 1.17
ARHGEF28-204ENST00000437974 RUNDC1Q96C34 613 aa22.33■■□□□ 1.17
ARHGEF28-204ENST00000437974 NUTM2GQ5VZR2 741 aa22.33■■□□□ 1.17
ARHGEF28-204ENST00000437974 RIC3Q7Z5B4 369 aa22.33■■□□□ 1.16
ARHGEF28-204ENST00000437974 GOLGA6L1Q8N7Z2 621 aa22.33■■□□□ 1.16
ARHGEF28-204ENST00000437974 USP35Q9P2H5 1018 aa22.33■■□□□ 1.16
ARHGEF28-204ENST00000437974 ANO2Q9NQ90 1003 aa22.32■■□□□ 1.16
ARHGEF28-204ENST00000437974 FGD6Q6ZV73 1430 aa22.32■■□□□ 1.16
ARHGEF28-204ENST00000437974 DZIP1LQ8IYY4 767 aaKnown RBP22.32■■□□□ 1.16
ARHGEF28-204ENST00000437974 IGF1RP08069 1367 aa22.32■■□□□ 1.16
ARHGEF28-204ENST00000437974 NLRP6P59044 892 aa22.32■■□□□ 1.16
ARHGEF28-204ENST00000437974 HSP90AB4PQ58FF6 505 aa22.32■■□□□ 1.16
ARHGEF28-204ENST00000437974 RNF20Q5VTR2 975 aa22.31■■□□□ 1.16
ARHGEF28-204ENST00000437974 RAD54L2Q9Y4B4 1467 aa22.31■■□□□ 1.16
ARHGEF28-204ENST00000437974 KIF21BO75037 1637 aa22.31■■□□□ 1.16
ARHGEF28-204ENST00000437974 ERICH2A1L162 156 aa22.31■■□□□ 1.16
ARHGEF28-204ENST00000437974 HMOX1P09601 288 aa22.31■■□□□ 1.16
ARHGEF28-204ENST00000437974 CCDC47Q96A33 483 aaKnown RBP22.31■■□□□ 1.16
ARHGEF28-204ENST00000437974 GPRASP1Q5JY77 1395 aa22.3■■□□□ 1.16
ARHGEF28-204ENST00000437974 CCDC7Q96M83 1385 aa22.3■■□□□ 1.16
ARHGEF28-204ENST00000437974 GOLGA6L19H0YKK7 550 aa22.3■■□□□ 1.16
ARHGEF28-204ENST00000437974 KIF7Q2M1P5 1343 aa22.3■■□□□ 1.16
ARHGEF28-204ENST00000437974 TPM1P09493 284 aa22.29■■□□□ 1.16
ARHGEF28-204ENST00000437974 NFXL1Q6ZNB6 911 aa22.29■■□□□ 1.16
ARHGEF28-204ENST00000437974 BECN2A8MW95 431 aa22.29■■□□□ 1.16
ARHGEF28-204ENST00000437974 ZNF644Q9H582 1327 aaPredicted RBP22.28■■□□□ 1.16
ARHGEF28-204ENST00000437974 AIMP1Q12904 312 aaKnown RBP22.28■■□□□ 1.16
ARHGEF28-204ENST00000437974 CABP2Q9NPB3 220 aa22.28■■□□□ 1.16
ARHGEF28-204ENST00000437974 GGNBP2Q9H3C7 697 aa22.28■■□□□ 1.16
ARHGEF28-204ENST00000437974 CUX1P39880 1505 aa22.28■■□□□ 1.16
ARHGEF28-204ENST00000437974 DCAF8L1A6NGE4 600 aa22.27■■□□□ 1.16
ARHGEF28-204ENST00000437974 GSE1Q14687 1217 aa22.27■■□□□ 1.16
ARHGEF28-204ENST00000437974 FOXD4L6Q3SYB3 417 aaPredicted RBP22.27■■□□□ 1.16
ARHGEF28-204ENST00000437974 FOXD4L3Q6VB84 417 aaPredicted RBP22.27■■□□□ 1.16
ARHGEF28-204ENST00000437974 WASHC2AQ641Q2 1341 aa22.27■■□□□ 1.16
ARHGEF28-204ENST00000437974 PROSER2Q86WR7 435 aaPredicted RBP22.26■■□□□ 1.15
ARHGEF28-204ENST00000437974 PRDM2Q13029 1718 aa22.26■■□□□ 1.15
ARHGEF28-204ENST00000437974 TXNDC2Q86VQ3 553 aa22.26■■□□□ 1.15
ARHGEF28-204ENST00000437974 DDX49Q9Y6V7 483 aaKnown RBP22.26■■□□□ 1.15
ARHGEF28-204ENST00000437974 FANCIQ9NVI1 1328 aa22.26■■□□□ 1.15
ARHGEF28-204ENST00000437974 ERC2O15083 957 aa22.25■■□□□ 1.15
ARHGEF28-204ENST00000437974 AQRO60306 1485 aaKnown RBP eCLIP22.25■■□□□ 1.151e-6■■□□□ 14.2
ARHGEF28-204ENST00000437974 ANO8Q9HCE9 1232 aaPredicted RBP22.25■■□□□ 1.15
ARHGEF28-204ENST00000437974 ESCO1Q5FWF5 840 aa22.25■■□□□ 1.15
ARHGEF28-204ENST00000437974 WWC1Q8IX03 1113 aa22.25■■□□□ 1.15
ARHGEF28-204ENST00000437974 NEUROD6Q96NK8 337 aa22.25■■□□□ 1.15
ARHGEF28-204ENST00000437974 CNTLNQ9NXG0 1405 aa22.25■■□□□ 1.15
ARHGEF28-204ENST00000437974 TMEM132EQ6IEE7 984 aa22.25■■□□□ 1.15
ARHGEF28-204ENST00000437974 CCDC43Q96MW1 224 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms