RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 CHD2O14647 1828 aaKnown RBP22.08■■□□□ 1.13
LINC01088-201ENST00000437737 ANKRD30AQ9BXX3 1397 aa22.08■■□□□ 1.12
LINC01088-201ENST00000437737 MYO5BQ9ULV0 1848 aa22.08■■□□□ 1.12
LINC01088-201ENST00000437737 COL16A1Q07092 1604 aaPredicted RBP22.07■■□□□ 1.12
LINC01088-201ENST00000437737 CHIC2Q9UKJ5 165 aa22.07■■□□□ 1.12
LINC01088-201ENST00000437737 SLC52A1Q9NWF4 448 aa22.06■■□□□ 1.12
LINC01088-201ENST00000437737 PPP1R15AO75807 674 aaPredicted RBP22.05■■□□□ 1.12
LINC01088-201ENST00000437737 MEX3CQ5U5Q3 659 aaKnown RBP22.05■■□□□ 1.12
LINC01088-201ENST00000437737 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
LINC01088-201ENST00000437737 PLEKHG1Q9ULL1 1385 aa22.02■■□□□ 1.12
LINC01088-201ENST00000437737 C14orf37Q86TY3 774 aa22.02■■□□□ 1.12
LINC01088-201ENST00000437737 FGD6Q6ZV73 1430 aa22.02■■□□□ 1.12
LINC01088-201ENST00000437737 LRP6O75581 1613 aa22.02■■□□□ 1.11
LINC01088-201ENST00000437737 ZFYVE9O95405 1425 aa22.01■■□□□ 1.11
LINC01088-201ENST00000437737 APLP2Q06481 763 aa22.01■■□□□ 1.11
LINC01088-201ENST00000437737 SPATA31A6Q5VVP1 1343 aa22.01■■□□□ 1.11
LINC01088-201ENST00000437737 RIMS2Q9UQ26 1411 aa22■■□□□ 1.11
LINC01088-201ENST00000437737 LOC105371045A0A1W2PR82 267 aa22■■□□□ 1.11
LINC01088-201ENST00000437737 HDGFP51858 240 aaKnown RBP22■■□□□ 1.11
LINC01088-201ENST00000437737 ZNF772Q68DY9 489 aaPredicted RBP22■■□□□ 1.11
LINC01088-201ENST00000437737 TRIM52Q96A61 297 aa22■■□□□ 1.11
LINC01088-201ENST00000437737 RPRD2Q5VT52 1461 aaKnown RBP21.99■■□□□ 1.11
LINC01088-201ENST00000437737 SHPRHQ149N8 1683 aa21.98■■□□□ 1.11
LINC01088-201ENST00000437737 UPF1Q92900 1129 aaKnown RBP eCLIP21.97■■□□□ 1.11
LINC01088-201ENST00000437737 TMEM131LA2VDJ0 1609 aa21.97■■□□□ 1.11
LINC01088-201ENST00000437737 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.97■■□□□ 1.11
LINC01088-201ENST00000437737 NCOA3Q9Y6Q9 1424 aa21.97■■□□□ 1.11
LINC01088-201ENST00000437737 AHDC1Q5TGY3 1603 aaPredicted RBP21.96■■□□□ 1.11
LINC01088-201ENST00000437737 CADPS2Q86UW7 1296 aa21.94■■□□□ 1.1
LINC01088-201ENST00000437737 TBX22Q9Y458 520 aa21.94■■□□□ 1.1
LINC01088-201ENST00000437737 ADGRL2O95490 1459 aa21.93■■□□□ 1.1
LINC01088-201ENST00000437737 CHGAP10645 457 aaKnown RBP21.93■■□□□ 1.1
LINC01088-201ENST00000437737 ATF3P18847 181 aa21.93■■□□□ 1.1
LINC01088-201ENST00000437737 DIP2AQ14689 1571 aa21.91■■□□□ 1.1
LINC01088-201ENST00000437737 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.91■■□□□ 1.1
LINC01088-201ENST00000437737 ANKRD50Q9ULJ7 1429 aa21.9■■□□□ 1.1
LINC01088-201ENST00000437737 RXRBP28702 533 aa21.9■■□□□ 1.1
LINC01088-201ENST00000437737 NUTM2DQ5VT03 806 aaPredicted RBP21.9■■□□□ 1.1
LINC01088-201ENST00000437737 C19orf44Q9H6X5 657 aa21.9■■□□□ 1.1
LINC01088-201ENST00000437737 ADAMTS13Q76LX8 1427 aa21.89■■□□□ 1.09
LINC01088-201ENST00000437737 NUTM2BA6NNL0 878 aaPredicted RBP21.88■■□□□ 1.09
LINC01088-201ENST00000437737 NUTM2EB1AL46 878 aaPredicted RBP21.88■■□□□ 1.09
LINC01088-201ENST00000437737 NUTM2AQ8IVF1 878 aaPredicted RBP21.88■■□□□ 1.09
LINC01088-201ENST00000437737 PIK3R4Q99570 1358 aa21.87■■□□□ 1.09
LINC01088-201ENST00000437737 TRPM2O94759 1503 aa21.85■■□□□ 1.09
LINC01088-201ENST00000437737 FAM50AQ14320 339 aaKnown RBP21.85■■□□□ 1.09
LINC01088-201ENST00000437737 BRINP3Q76B58 766 aa21.84■■□□□ 1.09
LINC01088-201ENST00000437737 E9PCH4 1651 aa21.84■■□□□ 1.09
LINC01088-201ENST00000437737 CDK12Q9NYV4 1490 aaPredicted RBP21.83■■□□□ 1.09
LINC01088-201ENST00000437737 UNC13BO14795 1591 aa21.83■■□□□ 1.09
LINC01088-201ENST00000437737 AMOTL2Q9Y2J4 779 aa21.82■■□□□ 1.08
LINC01088-201ENST00000437737 AFF2P51816 1311 aa21.81■■□□□ 1.08
LINC01088-201ENST00000437737 ASXL1Q8IXJ9 1541 aa21.8■■□□□ 1.08
LINC01088-201ENST00000437737 DCCP43146 1447 aa21.79■■□□□ 1.08
LINC01088-201ENST00000437737 PTPRUQ92729 1446 aa21.79■■□□□ 1.08
LINC01088-201ENST00000437737 NHSL1Q5SYE7 1610 aa21.78■■□□□ 1.08
LINC01088-201ENST00000437737 SETD5Q9C0A6 1442 aa21.77■■□□□ 1.08
LINC01088-201ENST00000437737 XRN1Q8IZH2 1706 aaKnown RBP21.75■■□□□ 1.07
LINC01088-201ENST00000437737 IQGAP3Q86VI3 1631 aa21.75■■□□□ 1.07
LINC01088-201ENST00000437737 MST1RQ04912 1400 aa21.74■■□□□ 1.07
LINC01088-201ENST00000437737 LRRC59Q96AG4 307 aaKnown RBP21.74■■□□□ 1.07
LINC01088-201ENST00000437737 C8orf37Q96NL8 207 aa21.74■■□□□ 1.07
LINC01088-201ENST00000437737 RGS12O14924 1447 aa21.73■■□□□ 1.07
LINC01088-201ENST00000437737 NRXN3Q9Y4C0 1643 aa21.73■■□□□ 1.07
LINC01088-201ENST00000437737 RBM6P78332 1123 aaKnown RBP21.71■■□□□ 1.07
LINC01088-201ENST00000437737 QTRT2Q9H974 415 aaKnown RBP21.71■■□□□ 1.07
LINC01088-201ENST00000437737 SETBP1Q9Y6X0 1596 aa21.7■■□□□ 1.06
LINC01088-201ENST00000437737 PNPLA6Q8IY17 1366 aa21.69■■□□□ 1.06
LINC01088-201ENST00000437737 DDX17Q92841 729 aaKnown RBP21.68■■□□□ 1.06
LINC01088-201ENST00000437737 NALCNQ8IZF0 1738 aa21.66■■□□□ 1.06
LINC01088-201ENST00000437737 NUP155O75694 1391 aa21.66■■□□□ 1.06
LINC01088-201ENST00000437737 ZNF326Q5BKZ1 582 aaKnown RBP21.66■■□□□ 1.06
LINC01088-201ENST00000437737 ADGRL3Q9HAR2 1447 aa21.65■■□□□ 1.06
LINC01088-201ENST00000437737 SPHKAPQ2M3C7 1700 aa21.65■■□□□ 1.06
LINC01088-201ENST00000437737 METP08581 1390 aa21.64■■□□□ 1.06
LINC01088-201ENST00000437737 ADAMTS2O95450 1211 aa21.64■■□□□ 1.05
LINC01088-201ENST00000437737 NGLY1Q96IV0 654 aa21.64■■□□□ 1.05
LINC01088-201ENST00000437737 ROCK1Q13464 1354 aa21.63■■□□□ 1.05
LINC01088-201ENST00000437737 ATAD2Q6PL18 1390 aa21.61■■□□□ 1.05
LINC01088-201ENST00000437737 C1orf167Q5SNV9 1468 aa21.58■■□□□ 1.05
LINC01088-201ENST00000437737 USP21Q9UK80 565 aa21.57■■□□□ 1.04
LINC01088-201ENST00000437737 LAMC1P11047 1609 aa21.56■■□□□ 1.04
LINC01088-201ENST00000437737 FOXD1Q16676 465 aa21.56■■□□□ 1.04
LINC01088-201ENST00000437737 NEXMIFQ5QGS0 1516 aa21.55■■□□□ 1.04
LINC01088-201ENST00000437737 TRPC5Q9UL62 973 aaPredicted RBP21.55■■□□□ 1.04
LINC01088-201ENST00000437737 ITGAEP38570 1179 aa21.54■■□□□ 1.04
LINC01088-201ENST00000437737 KIF1BO60333 1816 aa21.52■■□□□ 1.04
LINC01088-201ENST00000437737 CLTCL1P53675 1640 aa21.52■■□□□ 1.04
LINC01088-201ENST00000437737 ZRANB1Q9UGI0 708 aa21.52■■□□□ 1.04
LINC01088-201ENST00000437737 PTCH1Q13635 1447 aa21.52■■□□□ 1.04
LINC01088-201ENST00000437737 SOS2Q07890 1332 aaPredicted RBP21.52■■□□□ 1.03
LINC01088-201ENST00000437737 ORAI2Q96SN7 254 aa21.51■■□□□ 1.03
LINC01088-201ENST00000437737 COL22A1Q8NFW1 1626 aaPredicted RBP21.49■■□□□ 1.03
LINC01088-201ENST00000437737 ATRNO75882 1429 aa21.48■■□□□ 1.03
LINC01088-201ENST00000437737 FNBP4Q8N3X1 1017 aaPredicted RBP21.48■■□□□ 1.03
LINC01088-201ENST00000437737 ROBO2Q9HCK4 1378 aa21.46■■□□□ 1.03
LINC01088-201ENST00000437737 MARF1Q9Y4F3 1742 aaKnown RBP21.46■■□□□ 1.03
LINC01088-201ENST00000437737 SRCAPQ6ZRS2 3230 aa21.44■■□□□ 1.02
LINC01088-201ENST00000437737 MYOM2P54296 1465 aa21.42■■□□□ 1.02
LINC01088-201ENST00000437737 CCDC125Q86Z20 511 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms