RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 RIMS2Q9UQ26 1411 aa26.5■■□□□ 1.83
SBDSP1-203ENST00000437201 DISP3Q9P2K9 1392 aa26.5■■□□□ 1.83
SBDSP1-203ENST00000437201 TMEM131LA2VDJ0 1609 aa26.49■■□□□ 1.83
SBDSP1-203ENST00000437201 ZFYVE9O95405 1425 aa26.48■■□□□ 1.83
SBDSP1-203ENST00000437201 PLEKHG1Q9ULL1 1385 aa26.48■■□□□ 1.83
SBDSP1-203ENST00000437201 NAIPQ13075 1403 aa26.47■■□□□ 1.83
SBDSP1-203ENST00000437201 HSPA1LP34931 641 aa26.45■■□□□ 1.82
SBDSP1-203ENST00000437201 PROSER2Q86WR7 435 aaPredicted RBP26.43■■□□□ 1.82
SBDSP1-203ENST00000437201 HFM1A2PYH4 1435 aa26.41■■□□□ 1.82
SBDSP1-203ENST00000437201 TBX22Q9Y458 520 aa26.41■■□□□ 1.82
SBDSP1-203ENST00000437201 MYO5BQ9ULV0 1848 aa26.41■■□□□ 1.82
SBDSP1-203ENST00000437201 TMEM94Q12767 1356 aa26.39■■□□□ 1.82
SBDSP1-203ENST00000437201 TRIM52Q96A61 297 aa26.39■■□□□ 1.82
SBDSP1-203ENST00000437201 NKTRP30414 1462 aaKnown RBP26.38■■□□□ 1.81
SBDSP1-203ENST00000437201 ALKQ9UM73 1620 aa26.38■■□□□ 1.81
SBDSP1-203ENST00000437201 SENP3Q9H4L4 574 aaPredicted RBP26.36■■□□□ 1.81
SBDSP1-203ENST00000437201 SPHKAPQ2M3C7 1700 aa26.35■■□□□ 1.81
SBDSP1-203ENST00000437201 NUTM2DQ5VT03 806 aaPredicted RBP26.35■■□□□ 1.81
SBDSP1-203ENST00000437201 NWD1Q149M9 1564 aa26.34■■□□□ 1.81
SBDSP1-203ENST00000437201 ZNF326Q5BKZ1 582 aaKnown RBP26.33■■□□□ 1.81
SBDSP1-203ENST00000437201 PIK3R4Q99570 1358 aa26.32■■□□□ 1.8
SBDSP1-203ENST00000437201 XIRP1Q702N8 1843 aaKnown RBP26.31■■□□□ 1.8
SBDSP1-203ENST00000437201 DIP2AQ14689 1571 aa26.31■■□□□ 1.8
SBDSP1-203ENST00000437201 SLC4A1APQ9BWU0 796 aaKnown RBP26.3■■□□□ 1.8
SBDSP1-203ENST00000437201 MSH6P52701 1360 aa26.3■■□□□ 1.8
SBDSP1-203ENST00000437201 ADAMTS13Q76LX8 1427 aa26.29■■□□□ 1.8
SBDSP1-203ENST00000437201 TRPM2O94759 1503 aa26.29■■□□□ 1.8
SBDSP1-203ENST00000437201 RBM33Q96EV2 1170 aaKnown RBP26.27■■□□□ 1.8
SBDSP1-203ENST00000437201 FAM135BQ49AJ0 1406 aa26.27■■□□□ 1.8
SBDSP1-203ENST00000437201 NCOA3Q9Y6Q9 1424 aa26.27■■□□□ 1.8
SBDSP1-203ENST00000437201 CHD2O14647 1828 aaKnown RBP26.27■■□□□ 1.8
SBDSP1-203ENST00000437201 ACIN1Q9UKV3 1341 aaKnown RBP26.25■■□□□ 1.79
SBDSP1-203ENST00000437201 ILDR2Q71H61 639 aa26.23■■□□□ 1.79
SBDSP1-203ENST00000437201 C14orf37Q86TY3 774 aa26.22■■□□□ 1.79
SBDSP1-203ENST00000437201 CLTCL1P53675 1640 aa26.21■■□□□ 1.79
SBDSP1-203ENST00000437201 SLAIN2Q9P270 581 aa26.2■■□□□ 1.78
SBDSP1-203ENST00000437201 AMOTL2Q9Y2J4 779 aa26.2■■□□□ 1.78
SBDSP1-203ENST00000437201 VGFO15240 615 aaPredicted RBP26.18■■□□□ 1.78
SBDSP1-203ENST00000437201 SETBP1Q9Y6X0 1596 aa26.18■■□□□ 1.78
SBDSP1-203ENST00000437201 KIF1BO60333 1816 aa26.17■■□□□ 1.78
SBDSP1-203ENST00000437201 C19orf44Q9H6X5 657 aa26.17■■□□□ 1.78
SBDSP1-203ENST00000437201 RPGRIP1LQ68CZ1 1315 aa26.16■■□□□ 1.78
SBDSP1-203ENST00000437201 MED1Q15648 1581 aaPredicted RBP26.16■■□□□ 1.78
SBDSP1-203ENST00000437201 CADPS2Q86UW7 1296 aa26.15■■□□□ 1.78
SBDSP1-203ENST00000437201 ATF3P18847 181 aa26.14■■□□□ 1.78
SBDSP1-203ENST00000437201 NEXMIFQ5QGS0 1516 aa26.14■■□□□ 1.77
SBDSP1-203ENST00000437201 PHF23Q9BUL5 403 aaPredicted RBP26.13■■□□□ 1.77
SBDSP1-203ENST00000437201 MPHOSPH9Q99550 1183 aa26.12■■□□□ 1.77
SBDSP1-203ENST00000437201 ROBO1Q9Y6N7 1651 aa26.12■■□□□ 1.77
SBDSP1-203ENST00000437201 SOCS7O14512 581 aa26.11■■□□□ 1.77
SBDSP1-203ENST00000437201 PTPRUQ92729 1446 aa26.11■■□□□ 1.77
SBDSP1-203ENST00000437201 NRXN3Q9Y4C0 1643 aa26.1■■□□□ 1.77
SBDSP1-203ENST00000437201 METP08581 1390 aa26.08■■□□□ 1.77
SBDSP1-203ENST00000437201 FOXD1Q16676 465 aa26.08■■□□□ 1.77
SBDSP1-203ENST00000437201 CCDC144AA2RUR9 1427 aa26.07■■□□□ 1.76
SBDSP1-203ENST00000437201 SETD5Q9C0A6 1442 aa26.07■■□□□ 1.76
SBDSP1-203ENST00000437201 XRN1Q8IZH2 1706 aaKnown RBP26.04■■□□□ 1.76
SBDSP1-203ENST00000437201 DCCP43146 1447 aa26.04■■□□□ 1.76
SBDSP1-203ENST00000437201 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.02■■□□□ 1.76
SBDSP1-203ENST00000437201 RGL3Q3MIN7 710 aa25.97■■□□□ 1.75
SBDSP1-203ENST00000437201 PHLPP1O60346 1717 aa25.97■■□□□ 1.75
SBDSP1-203ENST00000437201 ANKRD30BQ9BXX2 1392 aa25.96■■□□□ 1.75
SBDSP1-203ENST00000437201 JCADQ9P266 1359 aa25.96■■□□□ 1.75
SBDSP1-203ENST00000437201 PPLO60437 1756 aa25.95■■□□□ 1.75
SBDSP1-203ENST00000437201 PTCH1Q13635 1447 aa25.94■■□□□ 1.74
SBDSP1-203ENST00000437201 SPATA31E1Q6ZUB1 1445 aa25.94■■□□□ 1.74
SBDSP1-203ENST00000437201 ADGRL3Q9HAR2 1447 aa25.94■■□□□ 1.74
SBDSP1-203ENST00000437201 RAB3GAP2Q9H2M9 1393 aa25.94■■□□□ 1.74
SBDSP1-203ENST00000437201 BRINP3Q76B58 766 aa25.92■■□□□ 1.74
SBDSP1-203ENST00000437201 PRAG1Q86YV5 1406 aa25.9■■□□□ 1.74
SBDSP1-203ENST00000437201 ADGRF5Q8IZF2 1346 aa25.89■■□□□ 1.74
SBDSP1-203ENST00000437201 AHDC1Q5TGY3 1603 aaPredicted RBP25.89■■□□□ 1.74
SBDSP1-203ENST00000437201 MST1RQ04912 1400 aa25.88■■□□□ 1.73
SBDSP1-203ENST00000437201 SETD1AO15047 1707 aaKnown RBP25.88■■□□□ 1.73
SBDSP1-203ENST00000437201 ROBO2Q9HCK4 1378 aa25.87■■□□□ 1.73
SBDSP1-203ENST00000437201 HRCP23327 699 aa25.87■■□□□ 1.73
SBDSP1-203ENST00000437201 COL16A1Q07092 1604 aaPredicted RBP25.87■■□□□ 1.73
SBDSP1-203ENST00000437201 SPATA31A6Q5VVP1 1343 aa25.87■■□□□ 1.73
SBDSP1-203ENST00000437201 ASXL1Q8IXJ9 1541 aa25.83■■□□□ 1.73
SBDSP1-203ENST00000437201 RGS17Q9UGC6 210 aaPredicted RBP25.83■■□□□ 1.73
SBDSP1-203ENST00000437201 NALCNQ8IZF0 1738 aa25.82■■□□□ 1.72
SBDSP1-203ENST00000437201 PIK3C2GO75747 1445 aa25.8■■□□□ 1.72
SBDSP1-203ENST00000437201 LRRC59Q96AG4 307 aaKnown RBP25.8■■□□□ 1.72
SBDSP1-203ENST00000437201 IFT172Q9UG01 1749 aa25.8■■□□□ 1.72
SBDSP1-203ENST00000437201 LRPPRCP42704 1394 aaKnown RBP25.79■■□□□ 1.72
SBDSP1-203ENST00000437201 C1orf167Q5SNV9 1468 aa25.79■■□□□ 1.72
SBDSP1-203ENST00000437201 MEX3CQ5U5Q3 659 aaKnown RBP25.78■■□□□ 1.72
SBDSP1-203ENST00000437201 STK26Q9P289 416 aa25.78■■□□□ 1.72
SBDSP1-203ENST00000437201 ABCC11Q96J66 1382 aa25.77■■□□□ 1.72
SBDSP1-203ENST00000437201 C14orf93Q9H972 538 aaKnown RBP25.76■■□□□ 1.71
SBDSP1-203ENST00000437201 TECPR2O15040 1411 aa25.76■■□□□ 1.71
SBDSP1-203ENST00000437201 SHPRHQ149N8 1683 aa25.75■■□□□ 1.71
SBDSP1-203ENST00000437201 TMEM132EQ6IEE7 984 aa25.75■■□□□ 1.71
SBDSP1-203ENST00000437201 MYOM2P54296 1465 aa25.73■■□□□ 1.71
SBDSP1-203ENST00000437201 NHSL1Q5SYE7 1610 aa25.73■■□□□ 1.71
SBDSP1-203ENST00000437201 SIRT1Q96EB6 747 aa25.72■■□□□ 1.71
SBDSP1-203ENST00000437201 NRXN1Q9ULB1 1477 aa25.72■■□□□ 1.71
SBDSP1-203ENST00000437201 POTEAQ6S8J7 498 aa25.71■■□□□ 1.71
SBDSP1-203ENST00000437201 STAC3Q96MF2 364 aa25.71■■□□□ 1.71
SBDSP1-203ENST00000437201 YTHDC2Q9H6S0 1430 aaKnown RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms