RNA–Protein interactions for RNA: ENST00000436803.5

LINC00472-204, long intergenic non-protein coding RNA 472, humanhuman

TSL 5 BASIC

Gene LINC00472, Length 667 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-204ENST00000436803 FAM50AQ14320 339 aaKnown RBP34.15■■■■□ 3.06
LINC00472-204ENST00000436803 NKTRP30414 1462 aaKnown RBP34.14■■■■□ 3.06
LINC00472-204ENST00000436803 CHD2O14647 1828 aaKnown RBP34.13■■■■□ 3.05
LINC00472-204ENST00000436803 RGS17Q9UGC6 210 aaPredicted RBP34.12■■■■□ 3.05
LINC00472-204ENST00000436803 PROSER2Q86WR7 435 aaPredicted RBP34.11■■■■□ 3.05
LINC00472-204ENST00000436803 SLC52A1Q9NWF4 448 aa34.11■■■■□ 3.05
LINC00472-204ENST00000436803 ZFYVE9O95405 1425 aa34.11■■■■□ 3.05
LINC00472-204ENST00000436803 TMEM131LA2VDJ0 1609 aa34.11■■■■□ 3.05
LINC00472-204ENST00000436803 UNC13BO14795 1591 aa34.11■■■■□ 3.05
LINC00472-204ENST00000436803 E9PCH4 1651 aa34.06■■■■□ 3.04
LINC00472-204ENST00000436803 BCANQ96GW7 911 aa34.04■■■■□ 3.04
LINC00472-204ENST00000436803 RIMS2Q9UQ26 1411 aa34.04■■■■□ 3.04
LINC00472-204ENST00000436803 PLEKHG1Q9ULL1 1385 aa34.02■■■■□ 3.04
LINC00472-204ENST00000436803 PHLPP1O60346 1717 aa34.01■■■■□ 3.04
LINC00472-204ENST00000436803 MSH6P52701 1360 aa33.99■■■■□ 3.03
LINC00472-204ENST00000436803 IQGAP3Q86VI3 1631 aa33.97■■■■□ 3.03
LINC00472-204ENST00000436803 PPP1R15AO75807 674 aaPredicted RBP33.95■■■■□ 3.03
LINC00472-204ENST00000436803 POTEAQ6S8J7 498 aa33.9■■■■□ 3.02
LINC00472-204ENST00000436803 ADAMTS13Q76LX8 1427 aa33.89■■■■□ 3.02
LINC00472-204ENST00000436803 CHGAP10645 457 aaKnown RBP33.89■■■■□ 3.02
LINC00472-204ENST00000436803 COL16A1Q07092 1604 aaPredicted RBP33.89■■■■□ 3.02
LINC00472-204ENST00000436803 SLAIN2Q9P270 581 aa33.88■■■■□ 3.01
LINC00472-204ENST00000436803 DIP2AQ14689 1571 aa33.87■■■■□ 3.01
LINC00472-204ENST00000436803 NUTM2DQ5VT03 806 aaPredicted RBP33.87■■■■□ 3.01
LINC00472-204ENST00000436803 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.87■■■■□ 3.01
LINC00472-204ENST00000436803 ROCK1Q13464 1354 aa33.85■■■■□ 3.01
LINC00472-204ENST00000436803 HDGFP51858 240 aaKnown RBP33.85■■■■□ 3.01
LINC00472-204ENST00000436803 TBX22Q9Y458 520 aa33.85■■■■□ 3.01
LINC00472-204ENST00000436803 SETD1AO15047 1707 aaKnown RBP33.84■■■■□ 3.01
LINC00472-204ENST00000436803 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.81■■■■□ 3
LINC00472-204ENST00000436803 JCADQ9P266 1359 aa33.8■■■■□ 3
LINC00472-204ENST00000436803 NCOA3Q9Y6Q9 1424 aa33.79■■■■□ 3
LINC00472-204ENST00000436803 SPHKAPQ2M3C7 1700 aa33.78■■■■□ 3
LINC00472-204ENST00000436803 TRPM2O94759 1503 aa33.77■■■■□ 3
LINC00472-204ENST00000436803 NRXN3Q9Y4C0 1643 aa33.75■■■□□ 2.99
LINC00472-204ENST00000436803 NUP155O75694 1391 aa33.75■■■□□ 2.99
LINC00472-204ENST00000436803 C14orf37Q86TY3 774 aa33.75■■■□□ 2.99
LINC00472-204ENST00000436803 PIK3R4Q99570 1358 aa33.74■■■□□ 2.99
LINC00472-204ENST00000436803 AHDC1Q5TGY3 1603 aaPredicted RBP33.74■■■□□ 2.99
LINC00472-204ENST00000436803 PTPRUQ92729 1446 aa33.73■■■□□ 2.99
LINC00472-204ENST00000436803 LRP6O75581 1613 aa33.73■■■□□ 2.99
LINC00472-204ENST00000436803 ITGAEP38570 1179 aa33.72■■■□□ 2.99
LINC00472-204ENST00000436803 SHPRHQ149N8 1683 aa33.71■■■□□ 2.99
LINC00472-204ENST00000436803 XRN1Q8IZH2 1706 aaKnown RBP33.71■■■□□ 2.99
LINC00472-204ENST00000436803 C19orf44Q9H6X5 657 aa33.66■■■□□ 2.98
LINC00472-204ENST00000436803 SETBP1Q9Y6X0 1596 aa33.65■■■□□ 2.98
LINC00472-204ENST00000436803 CADPS2Q86UW7 1296 aa33.65■■■□□ 2.98
LINC00472-204ENST00000436803 AMOTL2Q9Y2J4 779 aa33.65■■■□□ 2.98
LINC00472-204ENST00000436803 ATF3P18847 181 aa33.63■■■□□ 2.97
LINC00472-204ENST00000436803 PPARGC1BQ86YN6 1023 aaKnown RBP33.62■■■□□ 2.97
LINC00472-204ENST00000436803 SPATA31A6Q5VVP1 1343 aa33.6■■■□□ 2.97
LINC00472-204ENST00000436803 CLTCL1P53675 1640 aa33.6■■■□□ 2.97
LINC00472-204ENST00000436803 DCCP43146 1447 aa33.56■■■□□ 2.96
LINC00472-204ENST00000436803 BRINP3Q76B58 766 aa33.56■■■□□ 2.96
LINC00472-204ENST00000436803 NHSL1Q5SYE7 1610 aa33.56■■■□□ 2.96
LINC00472-204ENST00000436803 ASXL1Q8IXJ9 1541 aa33.55■■■□□ 2.96
LINC00472-204ENST00000436803 NEXMIFQ5QGS0 1516 aa33.54■■■□□ 2.96
LINC00472-204ENST00000436803 KIF1BO60333 1816 aa33.54■■■□□ 2.96
LINC00472-204ENST00000436803 NALCNQ8IZF0 1738 aa33.53■■■□□ 2.96
LINC00472-204ENST00000436803 MEX3CQ5U5Q3 659 aaKnown RBP33.53■■■□□ 2.96
LINC00472-204ENST00000436803 METP08581 1390 aa33.52■■■□□ 2.96
LINC00472-204ENST00000436803 MST1RQ04912 1400 aa33.52■■■□□ 2.96
LINC00472-204ENST00000436803 ZNF326Q5BKZ1 582 aaKnown RBP33.51■■■□□ 2.95
LINC00472-204ENST00000436803 ZNF772Q68DY9 489 aaPredicted RBP33.45■■■□□ 2.95
LINC00472-204ENST00000436803 ADGRL3Q9HAR2 1447 aa33.44■■■□□ 2.94
LINC00472-204ENST00000436803 NUTM2BA6NNL0 878 aaPredicted RBP33.42■■■□□ 2.94
LINC00472-204ENST00000436803 NUTM2EB1AL46 878 aaPredicted RBP33.42■■■□□ 2.94
LINC00472-204ENST00000436803 NUTM2AQ8IVF1 878 aaPredicted RBP33.42■■■□□ 2.94
LINC00472-204ENST00000436803 TRIM52Q96A61 297 aa33.42■■■□□ 2.94
LINC00472-204ENST00000436803 SETD5Q9C0A6 1442 aa33.42■■■□□ 2.94
LINC00472-204ENST00000436803 NAIPQ13075 1403 aa33.38■■■□□ 2.93
LINC00472-204ENST00000436803 RRBP1Q9P2E9 1410 aaKnown RBP33.37■■■□□ 2.93
LINC00472-204ENST00000436803 DDX17Q92841 729 aaKnown RBP33.36■■■□□ 2.93
LINC00472-204ENST00000436803 UPF1Q92900 1129 aaKnown RBP eCLIP33.32■■■□□ 2.92
LINC00472-204ENST00000436803 PPLO60437 1756 aa33.32■■■□□ 2.92
LINC00472-204ENST00000436803 AFF2P51816 1311 aa33.31■■■□□ 2.92
LINC00472-204ENST00000436803 PNPLA6Q8IY17 1366 aa33.3■■■□□ 2.92
LINC00472-204ENST00000436803 LAMC1P11047 1609 aa33.29■■■□□ 2.92
LINC00472-204ENST00000436803 RXRBP28702 533 aa33.29■■■□□ 2.92
LINC00472-204ENST00000436803 PTCH1Q13635 1447 aa33.28■■■□□ 2.92
LINC00472-204ENST00000436803 LRRC59Q96AG4 307 aaKnown RBP33.28■■■□□ 2.92
LINC00472-204ENST00000436803 C1orf167Q5SNV9 1468 aa33.28■■■□□ 2.92
LINC00472-204ENST00000436803 CDK12Q9NYV4 1490 aaPredicted RBP33.28■■■□□ 2.92
LINC00472-204ENST00000436803 ROBO2Q9HCK4 1378 aa33.25■■■□□ 2.91
LINC00472-204ENST00000436803 C8orf37Q96NL8 207 aa33.22■■■□□ 2.91
LINC00472-204ENST00000436803 HFM1A2PYH4 1435 aa33.19■■■□□ 2.9
LINC00472-204ENST00000436803 PRAG1Q86YV5 1406 aa33.19■■■□□ 2.9
LINC00472-204ENST00000436803 RGS12O14924 1447 aa33.19■■■□□ 2.9
LINC00472-204ENST00000436803 VGFO15240 615 aaPredicted RBP33.18■■■□□ 2.9
LINC00472-204ENST00000436803 ORAI2Q96SN7 254 aa33.16■■■□□ 2.9
LINC00472-204ENST00000436803 SOS2Q07890 1332 aaPredicted RBP33.12■■■□□ 2.89
LINC00472-204ENST00000436803 SLC4A1APQ9BWU0 796 aaKnown RBP33.12■■■□□ 2.89
LINC00472-204ENST00000436803 RPGRIP1LQ68CZ1 1315 aa33.11■■■□□ 2.89
LINC00472-204ENST00000436803 ADAMTS2O95450 1211 aa33.11■■■□□ 2.89
LINC00472-204ENST00000436803 QTRT2Q9H974 415 aaKnown RBP33.11■■■□□ 2.89
LINC00472-204ENST00000436803 COL22A1Q8NFW1 1626 aaPredicted RBP33.1■■■□□ 2.89
LINC00472-204ENST00000436803 IFT172Q9UG01 1749 aa33.09■■■□□ 2.89
LINC00472-204ENST00000436803 RBM6P78332 1123 aaKnown RBP33.09■■■□□ 2.89
LINC00472-204ENST00000436803 CDC42BPGQ6DT37 1551 aa33.09■■■□□ 2.89
LINC00472-204ENST00000436803 NGLY1Q96IV0 654 aa33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms