RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 MYO5BQ9ULV0 1848 aa23.21■■□□□ 1.31
HDAC8-213ENST00000436675 NOS1P29475 1434 aa23.2■■□□□ 1.3
HDAC8-213ENST00000436675 NWD1Q149M9 1564 aa23.19■■□□□ 1.3
HDAC8-213ENST00000436675 NKTRP30414 1462 aaKnown RBP23.19■■□□□ 1.3
HDAC8-213ENST00000436675 SLAIN2Q9P270 581 aa23.19■■□□□ 1.3
HDAC8-213ENST00000436675 SLC52A1Q9NWF4 448 aa23.16■■□□□ 1.3
HDAC8-213ENST00000436675 CHD2O14647 1828 aaKnown RBP23.15■■□□□ 1.3
HDAC8-213ENST00000436675 PPP1R15AO75807 674 aaPredicted RBP23.15■■□□□ 1.3
HDAC8-213ENST00000436675 GCC2Q8IWJ2 1684 aa23.14■■□□□ 1.29
HDAC8-213ENST00000436675 JCADQ9P266 1359 aa23.13■■□□□ 1.29
HDAC8-213ENST00000436675 RIMS2Q9UQ26 1411 aa23.11■■□□□ 1.29
HDAC8-213ENST00000436675 C14orf37Q86TY3 774 aa23.11■■□□□ 1.29
HDAC8-213ENST00000436675 ZFYVE9O95405 1425 aa23.1■■□□□ 1.29
HDAC8-213ENST00000436675 CHGAP10645 457 aaKnown RBP23.1■■□□□ 1.29
HDAC8-213ENST00000436675 NUTM2DQ5VT03 806 aaPredicted RBP23.1■■□□□ 1.29
HDAC8-213ENST00000436675 PLEKHG1Q9ULL1 1385 aa23.1■■□□□ 1.29
HDAC8-213ENST00000436675 FAM50AQ14320 339 aaKnown RBP23.09■■□□□ 1.29
HDAC8-213ENST00000436675 COL16A1Q07092 1604 aaPredicted RBP23.08■■□□□ 1.29
HDAC8-213ENST00000436675 ADGRL2O95490 1459 aa23.06■■□□□ 1.28
HDAC8-213ENST00000436675 HDGFP51858 240 aaKnown RBP23.06■■□□□ 1.28
HDAC8-213ENST00000436675 MEX3CQ5U5Q3 659 aaKnown RBP23.06■■□□□ 1.28
HDAC8-213ENST00000436675 TMEM131LA2VDJ0 1609 aa23.06■■□□□ 1.28
HDAC8-213ENST00000436675 ANKRD50Q9ULJ7 1429 aa23.06■■□□□ 1.28
HDAC8-213ENST00000436675 RPRD2Q5VT52 1461 aaKnown RBP23.05■■□□□ 1.28
HDAC8-213ENST00000436675 LRP6O75581 1613 aa23.04■■□□□ 1.28
HDAC8-213ENST00000436675 TRIM52Q96A61 297 aa23.03■■□□□ 1.28
HDAC8-213ENST00000436675 TBX22Q9Y458 520 aa23.03■■□□□ 1.28
HDAC8-213ENST00000436675 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.02■■□□□ 1.28
HDAC8-213ENST00000436675 ATF3P18847 181 aa22.99■■□□□ 1.27
HDAC8-213ENST00000436675 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.99■■□□□ 1.27
HDAC8-213ENST00000436675 ADAMTS13Q76LX8 1427 aa22.99■■□□□ 1.27
HDAC8-213ENST00000436675 SPATA31A6Q5VVP1 1343 aa22.98■■□□□ 1.27
HDAC8-213ENST00000436675 E9PCH4 1651 aa22.97■■□□□ 1.27
HDAC8-213ENST00000436675 CADPS2Q86UW7 1296 aa22.97■■□□□ 1.27
HDAC8-213ENST00000436675 C19orf44Q9H6X5 657 aa22.97■■□□□ 1.27
HDAC8-213ENST00000436675 NUTM2BA6NNL0 878 aaPredicted RBP22.96■■□□□ 1.27
HDAC8-213ENST00000436675 NUTM2EB1AL46 878 aaPredicted RBP22.96■■□□□ 1.27
HDAC8-213ENST00000436675 ZNF772Q68DY9 489 aaPredicted RBP22.96■■□□□ 1.27
HDAC8-213ENST00000436675 NUTM2AQ8IVF1 878 aaPredicted RBP22.96■■□□□ 1.27
HDAC8-213ENST00000436675 NCOA3Q9Y6Q9 1424 aa22.96■■□□□ 1.27
HDAC8-213ENST00000436675 SHPRHQ149N8 1683 aa22.95■■□□□ 1.26
HDAC8-213ENST00000436675 AHDC1Q5TGY3 1603 aaPredicted RBP22.95■■□□□ 1.26
HDAC8-213ENST00000436675 UPF1Q92900 1129 aaKnown RBP eCLIP22.95■■□□□ 1.26
HDAC8-213ENST00000436675 UNC13BO14795 1591 aa22.94■■□□□ 1.26
HDAC8-213ENST00000436675 AMOTL2Q9Y2J4 779 aa22.93■■□□□ 1.26
HDAC8-213ENST00000436675 DIP2AQ14689 1571 aa22.92■■□□□ 1.26
HDAC8-213ENST00000436675 BRINP3Q76B58 766 aa22.91■■□□□ 1.26
HDAC8-213ENST00000436675 PTPRUQ92729 1446 aa22.91■■□□□ 1.26
HDAC8-213ENST00000436675 TRPM2O94759 1503 aa22.9■■□□□ 1.26
HDAC8-213ENST00000436675 PIK3R4Q99570 1358 aa22.89■■□□□ 1.26
HDAC8-213ENST00000436675 RXRBP28702 533 aa22.89■■□□□ 1.25
HDAC8-213ENST00000436675 IQGAP3Q86VI3 1631 aa22.86■■□□□ 1.25
HDAC8-213ENST00000436675 AFF2P51816 1311 aa22.84■■□□□ 1.25
HDAC8-213ENST00000436675 NUP155O75694 1391 aa22.84■■□□□ 1.25
HDAC8-213ENST00000436675 ASXL1Q8IXJ9 1541 aa22.83■■□□□ 1.25
HDAC8-213ENST00000436675 ITGAEP38570 1179 aa22.82■■□□□ 1.24
HDAC8-213ENST00000436675 DDX17Q92841 729 aaKnown RBP22.82■■□□□ 1.24
HDAC8-213ENST00000436675 ZNF326Q5BKZ1 582 aaKnown RBP22.81■■□□□ 1.24
HDAC8-213ENST00000436675 NRXN3Q9Y4C0 1643 aa22.81■■□□□ 1.24
HDAC8-213ENST00000436675 XRN1Q8IZH2 1706 aaKnown RBP22.8■■□□□ 1.24
HDAC8-213ENST00000436675 NHSL1Q5SYE7 1610 aa22.79■■□□□ 1.24
HDAC8-213ENST00000436675 MST1RQ04912 1400 aa22.79■■□□□ 1.24
HDAC8-213ENST00000436675 DCCP43146 1447 aa22.78■■□□□ 1.24
HDAC8-213ENST00000436675 C8orf37Q96NL8 207 aa22.78■■□□□ 1.24
HDAC8-213ENST00000436675 ROCK1Q13464 1354 aa22.77■■□□□ 1.24
HDAC8-213ENST00000436675 SETD5Q9C0A6 1442 aa22.77■■□□□ 1.24
HDAC8-213ENST00000436675 METP08581 1390 aa22.76■■□□□ 1.23
HDAC8-213ENST00000436675 LRRC59Q96AG4 307 aaKnown RBP22.76■■□□□ 1.23
HDAC8-213ENST00000436675 CDK12Q9NYV4 1490 aaPredicted RBP22.75■■□□□ 1.23
HDAC8-213ENST00000436675 SPHKAPQ2M3C7 1700 aa22.75■■□□□ 1.23
HDAC8-213ENST00000436675 SETBP1Q9Y6X0 1596 aa22.75■■□□□ 1.23
HDAC8-213ENST00000436675 QTRT2Q9H974 415 aaKnown RBP22.74■■□□□ 1.23
HDAC8-213ENST00000436675 NALCNQ8IZF0 1738 aa22.72■■□□□ 1.23
HDAC8-213ENST00000436675 PNPLA6Q8IY17 1366 aa22.72■■□□□ 1.23
HDAC8-213ENST00000436675 RGS12O14924 1447 aa22.72■■□□□ 1.23
HDAC8-213ENST00000436675 ADAMTS2O95450 1211 aa22.71■■□□□ 1.23
HDAC8-213ENST00000436675 RBM6P78332 1123 aaKnown RBP22.7■■□□□ 1.22
HDAC8-213ENST00000436675 ADGRL3Q9HAR2 1447 aa22.7■■□□□ 1.22
HDAC8-213ENST00000436675 PPARGC1BQ86YN6 1023 aaKnown RBP22.68■■□□□ 1.22
HDAC8-213ENST00000436675 NGLY1Q96IV0 654 aa22.68■■□□□ 1.22
HDAC8-213ENST00000436675 CLTCL1P53675 1640 aa22.65■■□□□ 1.22
HDAC8-213ENST00000436675 NEXMIFQ5QGS0 1516 aa22.64■■□□□ 1.21
HDAC8-213ENST00000436675 C1orf167Q5SNV9 1468 aa22.63■■□□□ 1.21
HDAC8-213ENST00000436675 KIF1BO60333 1816 aa22.62■■□□□ 1.21
HDAC8-213ENST00000436675 ORAI2Q96SN7 254 aa22.62■■□□□ 1.21
HDAC8-213ENST00000436675 SRCAPQ6ZRS2 3230 aa22.61■■□□□ 1.21
HDAC8-213ENST00000436675 USP21Q9UK80 565 aa22.59■■□□□ 1.21
HDAC8-213ENST00000436675 ROBO2Q9HCK4 1378 aa22.57■■□□□ 1.2
HDAC8-213ENST00000436675 SOS2Q07890 1332 aaPredicted RBP22.56■■□□□ 1.2
HDAC8-213ENST00000436675 ATAD2Q6PL18 1390 aa22.55■■□□□ 1.2
HDAC8-213ENST00000436675 LAMC1P11047 1609 aa22.55■■□□□ 1.2
HDAC8-213ENST00000436675 TRPC5Q9UL62 973 aaPredicted RBP22.54■■□□□ 1.2
HDAC8-213ENST00000436675 PTCH1Q13635 1447 aa22.52■■□□□ 1.2
HDAC8-213ENST00000436675 VGFO15240 615 aaPredicted RBP22.51■■□□□ 1.19
HDAC8-213ENST00000436675 FNBP4Q8N3X1 1017 aaPredicted RBP22.49■■□□□ 1.19
HDAC8-213ENST00000436675 ATRNO75882 1429 aa22.48■■□□□ 1.19
HDAC8-213ENST00000436675 EP400Q96L91 3159 aa22.48■■□□□ 1.19
HDAC8-213ENST00000436675 XPCQ01831 940 aaPredicted RBP22.48■■□□□ 1.19
HDAC8-213ENST00000436675 ESCO1Q5FWF5 840 aa22.48■■□□□ 1.19
HDAC8-213ENST00000436675 COL22A1Q8NFW1 1626 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms