RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 KIF1BO60333 1816 aa23.87■■□□□ 1.41
CTDSPL-204ENST00000435525 SPATA31E1Q6ZUB1 1445 aa23.87■■□□□ 1.41
CTDSPL-204ENST00000435525 RIMS2Q9UQ26 1411 aa23.87■■□□□ 1.41
CTDSPL-204ENST00000435525 VGFO15240 615 aaPredicted RBP23.87■■□□□ 1.41
CTDSPL-204ENST00000435525 SLIT1O75093 1534 aa23.85■■□□□ 1.41
CTDSPL-204ENST00000435525 TONSLQ96HA7 1378 aa23.85■■□□□ 1.41
CTDSPL-204ENST00000435525 ARHGAP23Q9P227 1491 aa23.84■■□□□ 1.41
CTDSPL-204ENST00000435525 BCANQ96GW7 911 aa23.84■■□□□ 1.41
CTDSPL-204ENST00000435525 DMRT2Q9Y5R5 561 aa23.84■■□□□ 1.41
CTDSPL-204ENST00000435525 SCAF11Q99590 1463 aaKnown RBP23.82■■□□□ 1.4
CTDSPL-204ENST00000435525 DCAF11Q8TEB1 546 aa23.8■■□□□ 1.4
CTDSPL-204ENST00000435525 TIMELESSQ9UNS1 1208 aa23.8■■□□□ 1.4
CTDSPL-204ENST00000435525 NCKAP5LQ9HCH0 1330 aa23.8■■□□□ 1.4
CTDSPL-204ENST00000435525 ZFYVE9O95405 1425 aa23.79■■□□□ 1.4
CTDSPL-204ENST00000435525 LTKP29376 864 aa23.79■■□□□ 1.4
CTDSPL-204ENST00000435525 NUTM2DQ5VT03 806 aaPredicted RBP23.77■■□□□ 1.4
CTDSPL-204ENST00000435525 KDM2AQ9Y2K7 1162 aa23.77■■□□□ 1.4
CTDSPL-204ENST00000435525 PLEKHG1Q9ULL1 1385 aa23.76■■□□□ 1.39
CTDSPL-204ENST00000435525 L3MBTL2Q969R5 705 aa23.75■■□□□ 1.39
CTDSPL-204ENST00000435525 NPHP4O75161 1426 aaPredicted RBP23.75■■□□□ 1.39
CTDSPL-204ENST00000435525 NEXMIFQ5QGS0 1516 aa23.74■■□□□ 1.39
CTDSPL-204ENST00000435525 MED14O60244 1454 aa23.71■■□□□ 1.39
CTDSPL-204ENST00000435525 MYOM2P54296 1465 aa23.71■■□□□ 1.39
CTDSPL-204ENST00000435525 MYO5BQ9ULV0 1848 aa23.7■■□□□ 1.38
CTDSPL-204ENST00000435525 ADGRF5Q8IZF2 1346 aa23.68■■□□□ 1.38
CTDSPL-204ENST00000435525 TBX22Q9Y458 520 aa23.66■■□□□ 1.38
CTDSPL-204ENST00000435525 POLR1AO95602 1720 aaPredicted RBP23.65■■□□□ 1.38
CTDSPL-204ENST00000435525 SENP3Q9H4L4 574 aaPredicted RBP23.65■■□□□ 1.38
CTDSPL-204ENST00000435525 PPLO60437 1756 aa23.65■■□□□ 1.38
CTDSPL-204ENST00000435525 SLC26A8Q96RN1 970 aa23.64■■□□□ 1.37
CTDSPL-204ENST00000435525 PIK3C2GO75747 1445 aa23.61■■□□□ 1.37
CTDSPL-204ENST00000435525 NRXN1Q9ULB1 1477 aa23.61■■□□□ 1.37
CTDSPL-204ENST00000435525 SETBP1Q9Y6X0 1596 aa23.61■■□□□ 1.37
CTDSPL-204ENST00000435525 IQGAP1P46940 1657 aa23.6■■□□□ 1.37
CTDSPL-204ENST00000435525 C14orf93Q9H972 538 aaKnown RBP23.6■■□□□ 1.37
CTDSPL-204ENST00000435525 DIP2AQ14689 1571 aa23.6■■□□□ 1.37
CTDSPL-204ENST00000435525 IFT172Q9UG01 1749 aa23.59■■□□□ 1.37
CTDSPL-204ENST00000435525 PIK3R4Q99570 1358 aa23.59■■□□□ 1.37
CTDSPL-204ENST00000435525 STRCQ7RTU9 1775 aa23.59■■□□□ 1.37
CTDSPL-204ENST00000435525 PRAG1Q86YV5 1406 aa23.59■■□□□ 1.37
CTDSPL-204ENST00000435525 ADAMTS13Q76LX8 1427 aa23.57■■□□□ 1.36
CTDSPL-204ENST00000435525 CFAP70Q5T0N1 1121 aa23.56■■□□□ 1.36
CTDSPL-204ENST00000435525 ZEB1P37275 1124 aaPredicted RBP23.55■■□□□ 1.36
CTDSPL-204ENST00000435525 ALKQ9UM73 1620 aa23.53■■□□□ 1.36
CTDSPL-204ENST00000435525 KCNA6P17658 529 aa23.52■■□□□ 1.36
CTDSPL-204ENST00000435525 LAMC1P11047 1609 aa23.51■■□□□ 1.35
CTDSPL-204ENST00000435525 ROCK2O75116 1388 aaKnown RBP23.5■■□□□ 1.35
CTDSPL-204ENST00000435525 METP08581 1390 aa23.49■■□□□ 1.35
CTDSPL-204ENST00000435525 NBPF8Q3BBV2 869 aa23.48■■□□□ 1.35
CTDSPL-204ENST00000435525 TMEM132EQ6IEE7 984 aa23.48■■□□□ 1.35
CTDSPL-204ENST00000435525 AMOTL2Q9Y2J4 779 aa23.48■■□□□ 1.35
CTDSPL-204ENST00000435525 NRXN3Q9Y4C0 1643 aa23.48■■□□□ 1.35
CTDSPL-204ENST00000435525 LRPPRCP42704 1394 aaKnown RBP23.46■■□□□ 1.35
CTDSPL-204ENST00000435525 STK26Q9P289 416 aa23.46■■□□□ 1.35
CTDSPL-204ENST00000435525 ZNF335Q9H4Z2 1342 aaPredicted RBP23.45■■□□□ 1.34
CTDSPL-204ENST00000435525 CARD11Q9BXL7 1154 aa23.44■■□□□ 1.34
CTDSPL-204ENST00000435525 YTHDC2Q9H6S0 1430 aaKnown RBP23.43■■□□□ 1.34
CTDSPL-204ENST00000435525 KIAA1210Q9ULL0 1709 aa23.43■■□□□ 1.34
CTDSPL-204ENST00000435525 NBPF1Q3BBV0 1214 aa23.43■■□□□ 1.34
CTDSPL-204ENST00000435525 RALGAPBQ86X10 1494 aa23.43■■□□□ 1.34
CTDSPL-204ENST00000435525 ABCC11Q96J66 1382 aa23.42■■□□□ 1.34
CTDSPL-204ENST00000435525 PROSER2Q86WR7 435 aaPredicted RBP23.42■■□□□ 1.34
CTDSPL-204ENST00000435525 NKTRP30414 1462 aaKnown RBP23.41■■□□□ 1.34
CTDSPL-204ENST00000435525 CPS1P31327 1500 aa23.4■■□□□ 1.34
CTDSPL-204ENST00000435525 SIRT1Q96EB6 747 aa23.4■■□□□ 1.34
CTDSPL-204ENST00000435525 EIF3AQ14152 1382 aaKnown RBP23.4■■□□□ 1.34
CTDSPL-204ENST00000435525 POGKQ9P215 609 aa23.39■■□□□ 1.33
CTDSPL-204ENST00000435525 TRAK1Q9UPV9 953 aa23.39■■□□□ 1.33
CTDSPL-204ENST00000435525 PTPRUQ92729 1446 aa23.39■■□□□ 1.33
CTDSPL-204ENST00000435525 GPRASP1Q5JY77 1395 aa23.39■■□□□ 1.33
CTDSPL-204ENST00000435525 ADGRB1O14514 1584 aa23.37■■□□□ 1.33
CTDSPL-204ENST00000435525 C14orf37Q86TY3 774 aa23.37■■□□□ 1.33
CTDSPL-204ENST00000435525 TRPM1Q7Z4N2 1603 aa23.37■■□□□ 1.33
CTDSPL-204ENST00000435525 NWD1Q149M9 1564 aa23.36■■□□□ 1.33
CTDSPL-204ENST00000435525 TECPR2O15040 1411 aa23.36■■□□□ 1.33
CTDSPL-204ENST00000435525 PTCH1Q13635 1447 aa23.36■■□□□ 1.33
CTDSPL-204ENST00000435525 ASXL1Q8IXJ9 1541 aa23.35■■□□□ 1.33
CTDSPL-204ENST00000435525 SETD1AO15047 1707 aaKnown RBP23.35■■□□□ 1.33
CTDSPL-204ENST00000435525 FAM135BQ49AJ0 1406 aa23.33■■□□□ 1.33
CTDSPL-204ENST00000435525 NCOA3Q9Y6Q9 1424 aa23.33■■□□□ 1.32
CTDSPL-204ENST00000435525 CHD2O14647 1828 aaKnown RBP23.32■■□□□ 1.32
CTDSPL-204ENST00000435525 PRAM1Q96QH2 718 aa23.32■■□□□ 1.32
CTDSPL-204ENST00000435525 DLC1Q96QB1 1528 aa23.32■■□□□ 1.32
CTDSPL-204ENST00000435525 ROBO2Q9HCK4 1378 aa23.31■■□□□ 1.32
CTDSPL-204ENST00000435525 XRN1Q8IZH2 1706 aaKnown RBP23.3■■□□□ 1.32
CTDSPL-204ENST00000435525 TMEM94Q12767 1356 aa23.3■■□□□ 1.32
CTDSPL-204ENST00000435525 SLC24A1O60721 1099 aa23.29■■□□□ 1.32
CTDSPL-204ENST00000435525 CENPJQ9HC77 1338 aaPredicted RBP23.29■■□□□ 1.32
CTDSPL-204ENST00000435525 WAPLQ7Z5K2 1190 aa23.28■■□□□ 1.32
CTDSPL-204ENST00000435525 LTBP4Q8N2S1 1624 aa23.27■■□□□ 1.32
CTDSPL-204ENST00000435525 LRRC7Q96NW7 1537 aa23.27■■□□□ 1.32
CTDSPL-204ENST00000435525 MSH6P52701 1360 aa23.27■■□□□ 1.31
CTDSPL-204ENST00000435525 KNDC1Q76NI1 1749 aa23.26■■□□□ 1.31
CTDSPL-204ENST00000435525 EIF4G2P78344 907 aaKnown RBP eCLIP23.26■■□□□ 1.318e-7■■■■■ 29.1
CTDSPL-204ENST00000435525 SAFB2Q14151 953 aaKnown RBP eCLIP23.26■■□□□ 1.31
CTDSPL-204ENST00000435525 USP47Q96K76 1375 aa23.26■■□□□ 1.31
CTDSPL-204ENST00000435525 CERKQ8TCT0 537 aa23.25■■□□□ 1.31
CTDSPL-204ENST00000435525 C19orf44Q9H6X5 657 aa23.25■■□□□ 1.31
CTDSPL-204ENST00000435525 ATF3P18847 181 aa23.23■■□□□ 1.31
CTDSPL-204ENST00000435525 RBM33Q96EV2 1170 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms