RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 GPRASP1Q5JY77 1395 aa21.43■■□□□ 1.02
TMEM40-204ENST00000435218 A2ML1A8K2U0 1454 aa21.43■■□□□ 1.02
TMEM40-204ENST00000435218 POLR1AO95602 1720 aaPredicted RBP21.42■■□□□ 1.02
TMEM40-204ENST00000435218 MYO3AQ8NEV4 1616 aa21.42■■□□□ 1.02
TMEM40-204ENST00000435218 SETD1BQ9UPS6 1966 aaKnown RBP21.42■■□□□ 1.02
TMEM40-204ENST00000435218 ZNF326Q5BKZ1 582 aaKnown RBP21.41■■□□□ 1.02
TMEM40-204ENST00000435218 CHGAP10645 457 aaKnown RBP21.4■■□□□ 1.02
TMEM40-204ENST00000435218 IQGAP1P46940 1657 aa21.39■■□□□ 1.01
TMEM40-204ENST00000435218 SETBP1Q9Y6X0 1596 aa21.38■■□□□ 1.01
TMEM40-204ENST00000435218 PIK3C2GO75747 1445 aa21.38■■□□□ 1.01
TMEM40-204ENST00000435218 ZNF142P52746 1687 aaPredicted RBP21.37■■□□□ 1.01
TMEM40-204ENST00000435218 ROCK2O75116 1388 aaKnown RBP21.37■■□□□ 1.01
TMEM40-204ENST00000435218 EIF4G2P78344 907 aaKnown RBP eCLIP21.36■■□□□ 1.01
TMEM40-204ENST00000435218 VGFO15240 615 aaPredicted RBP21.34■■□□□ 1.01
TMEM40-204ENST00000435218 CEBPAP49715 358 aaPredicted RBP21.34■■□□□ 1.01
TMEM40-204ENST00000435218 ADGRF5Q8IZF2 1346 aa21.34■■□□□ 1.01
TMEM40-204ENST00000435218 USP47Q96K76 1375 aa21.32■■□□□ 1
TMEM40-204ENST00000435218 STAG3Q9UJ98 1225 aa21.32■■□□□ 1
TMEM40-204ENST00000435218 HSPA5P11021 654 aaKnown RBP21.31■■□□□ 1
TMEM40-204ENST00000435218 CARD11Q9BXL7 1154 aa21.31■■□□□ 1
TMEM40-204ENST00000435218 CEP170BQ9Y4F5 1589 aaPredicted RBP21.31■■□□□ 1
TMEM40-204ENST00000435218 PTPRMP28827 1452 aa21.3■■□□□ 1
TMEM40-204ENST00000435218 RIMS2Q9UQ26 1411 aa21.3■■□□□ 1
TMEM40-204ENST00000435218 NBPF1Q3BBV0 1214 aa21.29■■□□□ 1
TMEM40-204ENST00000435218 SLIT1O75093 1534 aa21.29■■□□□ 1
TMEM40-204ENST00000435218 SETD1AO15047 1707 aaKnown RBP21.29■■□□□ 1
TMEM40-204ENST00000435218 ADGRB1O14514 1584 aa21.29■■□□□ 1
TMEM40-204ENST00000435218 ARHGAP23Q9P227 1491 aa21.27■■□□□ 1
TMEM40-204ENST00000435218 SCAF11Q99590 1463 aaKnown RBP21.26■□□□□ 0.99
TMEM40-204ENST00000435218 C14orf93Q9H972 538 aaKnown RBP21.26■□□□□ 0.99
TMEM40-204ENST00000435218 TMEM2Q9UHN6 1383 aa21.26■□□□□ 0.99
TMEM40-204ENST00000435218 NRXN3Q9Y4C0 1643 aa21.25■□□□□ 0.99
TMEM40-204ENST00000435218 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.24■□□□□ 0.99
TMEM40-204ENST00000435218 ALKQ9UM73 1620 aa21.23■□□□□ 0.99
TMEM40-204ENST00000435218 HDGFP51858 240 aaKnown RBP21.23■□□□□ 0.99
TMEM40-204ENST00000435218 CFAP70Q5T0N1 1121 aa21.23■□□□□ 0.99
TMEM40-204ENST00000435218 HIRIP3Q9BW71 556 aaPredicted RBP21.22■□□□□ 0.99
TMEM40-204ENST00000435218 ASXL1Q8IXJ9 1541 aa21.21■□□□□ 0.99
TMEM40-204ENST00000435218 ARHGEF28Q8N1W1 1705 aaKnown RBP21.2■□□□□ 0.98
TMEM40-204ENST00000435218 EIF3AQ14152 1382 aaKnown RBP21.18■□□□□ 0.98
TMEM40-204ENST00000435218 NUTM2DQ5VT03 806 aaPredicted RBP21.18■□□□□ 0.98
TMEM40-204ENST00000435218 THEMISQ8N1K5 641 aaPredicted RBP21.18■□□□□ 0.98
TMEM40-204ENST00000435218 ST20-MTHFSA0A0A6YYL1 179 aa21.16■□□□□ 0.98
TMEM40-204ENST00000435218 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
TMEM40-204ENST00000435218 DIEXFQ68CQ4 756 aaKnown RBP21.15■□□□□ 0.98
TMEM40-204ENST00000435218 PLEKHG1Q9ULL1 1385 aa21.15■□□□□ 0.98
TMEM40-204ENST00000435218 KNDC1Q76NI1 1749 aa21.15■□□□□ 0.98
TMEM40-204ENST00000435218 QRICH2Q9H0J4 1663 aa21.14■□□□□ 0.97
TMEM40-204ENST00000435218 DIP2AQ14689 1571 aa21.13■□□□□ 0.97
TMEM40-204ENST00000435218 WASHC2AQ641Q2 1341 aa21.13■□□□□ 0.97
TMEM40-204ENST00000435218 CCDC7Q96M83 1385 aa21.13■□□□□ 0.97
TMEM40-204ENST00000435218 SBNO2Q9Y2G9 1366 aa21.12■□□□□ 0.97
TMEM40-204ENST00000435218 DLC1Q96QB1 1528 aa21.1■□□□□ 0.97
TMEM40-204ENST00000435218 MED14O60244 1454 aa21.1■□□□□ 0.97
TMEM40-204ENST00000435218 TESK2Q96S53 571 aa21.1■□□□□ 0.97
TMEM40-204ENST00000435218 EID1Q9Y6B2 187 aa21.1■□□□□ 0.97
TMEM40-204ENST00000435218 KDM4FA0A1W2PPD8 638 aa21.09■□□□□ 0.97
TMEM40-204ENST00000435218 C11orf95C9JLR9 678 aaPredicted RBP21.09■□□□□ 0.97
TMEM40-204ENST00000435218 LTKP29376 864 aa21.09■□□□□ 0.97
TMEM40-204ENST00000435218 ADAMTS13Q76LX8 1427 aa21.09■□□□□ 0.97
TMEM40-204ENST00000435218 YTHDC2Q9H6S0 1430 aaKnown RBP21.09■□□□□ 0.97
TMEM40-204ENST00000435218 KIF7Q2M1P5 1343 aa21.09■□□□□ 0.97
TMEM40-204ENST00000435218 SLC24A1O60721 1099 aa21.09■□□□□ 0.97
TMEM40-204ENST00000435218 TXNDC2Q86VQ3 553 aa21.08■□□□□ 0.96
TMEM40-204ENST00000435218 TMEM132EQ6IEE7 984 aa21.06■□□□□ 0.96
TMEM40-204ENST00000435218 LRPPRCP42704 1394 aaKnown RBP21.04■□□□□ 0.96
TMEM40-204ENST00000435218 CPS1P31327 1500 aa21.04■□□□□ 0.96
TMEM40-204ENST00000435218 TECPR2O15040 1411 aa21.04■□□□□ 0.96
TMEM40-204ENST00000435218 CENPJQ9HC77 1338 aaPredicted RBP21.03■□□□□ 0.96
TMEM40-204ENST00000435218 TMF1P82094 1093 aa21.02■□□□□ 0.96
TMEM40-204ENST00000435218 DDX10Q13206 875 aaKnown RBP21.02■□□□□ 0.96
TMEM40-204ENST00000435218 TRAK1Q9UPV9 953 aa21.02■□□□□ 0.96
TMEM40-204ENST00000435218 ABCC11Q96J66 1382 aa21.02■□□□□ 0.96
TMEM40-204ENST00000435218 METP08581 1390 aa21.01■□□□□ 0.95
TMEM40-204ENST00000435218 DISP3Q9P2K9 1392 aa21.01■□□□□ 0.95
TMEM40-204ENST00000435218 ANKLE2Q86XL3 938 aa20.99■□□□□ 0.95
TMEM40-204ENST00000435218 MYOM1P52179 1685 aa20.99■□□□□ 0.95
TMEM40-204ENST00000435218 CHD2O14647 1828 aaKnown RBP20.99■□□□□ 0.95
TMEM40-204ENST00000435218 XRN1Q8IZH2 1706 aaKnown RBP20.99■□□□□ 0.95
TMEM40-204ENST00000435218 TBX22Q9Y458 520 aa20.99■□□□□ 0.95
TMEM40-204ENST00000435218 CDCA8Q53HL2 280 aa20.98■□□□□ 0.95
TMEM40-204ENST00000435218 SIRT1Q96EB6 747 aa20.97■□□□□ 0.95
TMEM40-204ENST00000435218 FAM135BQ49AJ0 1406 aa20.97■□□□□ 0.95
TMEM40-204ENST00000435218 PIK3R4Q99570 1358 aa20.96■□□□□ 0.95
TMEM40-204ENST00000435218 BCANQ96GW7 911 aa20.94■□□□□ 0.94
TMEM40-204ENST00000435218 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
TMEM40-204ENST00000435218 TULP4Q9NRJ4 1543 aa20.94■□□□□ 0.94
TMEM40-204ENST00000435218 STK26Q9P289 416 aa20.93■□□□□ 0.94
TMEM40-204ENST00000435218 NPHP4O75161 1426 aaPredicted RBP20.92■□□□□ 0.94
TMEM40-204ENST00000435218 LMTK3Q96Q04 1460 aa20.92■□□□□ 0.94
TMEM40-204ENST00000435218 PUS7Q96PZ0 661 aaKnown RBP20.92■□□□□ 0.94
TMEM40-204ENST00000435218 PTCH1Q13635 1447 aa20.91■□□□□ 0.94
TMEM40-204ENST00000435218 PTPRUQ92729 1446 aa20.91■□□□□ 0.94
TMEM40-204ENST00000435218 ADGRB2O60241 1585 aa20.9■□□□□ 0.94
TMEM40-204ENST00000435218 PRAM1Q96QH2 718 aa20.89■□□□□ 0.94
TMEM40-204ENST00000435218 SLC26A8Q96RN1 970 aa20.89■□□□□ 0.94
TMEM40-204ENST00000435218 STRCQ7RTU9 1775 aa20.87■□□□□ 0.93
TMEM40-204ENST00000435218 EVC2Q86UK5 1308 aa20.87■□□□□ 0.93
TMEM40-204ENST00000435218 POGKQ9P215 609 aa20.87■□□□□ 0.93
TMEM40-204ENST00000435218 NWD1Q149M9 1564 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms