RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 FAM135BQ49AJ0 1406 aa20.67■□□□□ 0.9
CDC42EP1-204ENST00000434728 MSH6P52701 1360 aa20.66■□□□□ 0.9
CDC42EP1-204ENST00000434728 NKTRP30414 1462 aaKnown RBP20.66■□□□□ 0.9
CDC42EP1-204ENST00000434728 TET3O43151 1660 aa20.66■□□□□ 0.9
CDC42EP1-204ENST00000434728 GCC2Q8IWJ2 1684 aa20.65■□□□□ 0.9
CDC42EP1-204ENST00000434728 ROBO1Q9Y6N7 1651 aa20.65■□□□□ 0.9
CDC42EP1-204ENST00000434728 CHGAP10645 457 aaKnown RBP20.65■□□□□ 0.9
CDC42EP1-204ENST00000434728 MYO5BQ9ULV0 1848 aa20.64■□□□□ 0.9
CDC42EP1-204ENST00000434728 NWD1Q149M9 1564 aa20.63■□□□□ 0.89
CDC42EP1-204ENST00000434728 RIMS2Q9UQ26 1411 aa20.61■□□□□ 0.89
CDC42EP1-204ENST00000434728 PLEKHG1Q9ULL1 1385 aa20.6■□□□□ 0.89
CDC42EP1-204ENST00000434728 C14orf37Q86TY3 774 aa20.6■□□□□ 0.89
CDC42EP1-204ENST00000434728 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.58■□□□□ 0.89
CDC42EP1-204ENST00000434728 ZFYVE9O95405 1425 aa20.58■□□□□ 0.88
CDC42EP1-204ENST00000434728 UNC13BO14795 1591 aa20.58■□□□□ 0.88
CDC42EP1-204ENST00000434728 TMEM131LA2VDJ0 1609 aa20.57■□□□□ 0.88
CDC42EP1-204ENST00000434728 CHD2O14647 1828 aaKnown RBP20.57■□□□□ 0.88
CDC42EP1-204ENST00000434728 PHLPP1O60346 1717 aa20.56■□□□□ 0.88
CDC42EP1-204ENST00000434728 SLAIN2Q9P270 581 aa20.56■□□□□ 0.88
CDC42EP1-204ENST00000434728 ITGAEP38570 1179 aa20.54■□□□□ 0.88
CDC42EP1-204ENST00000434728 NUTM2DQ5VT03 806 aaPredicted RBP20.54■□□□□ 0.88
CDC42EP1-204ENST00000434728 RGS17Q9UGC6 210 aaPredicted RBP20.54■□□□□ 0.88
CDC42EP1-204ENST00000434728 E9PCH4 1651 aa20.54■□□□□ 0.88
CDC42EP1-204ENST00000434728 TBX22Q9Y458 520 aa20.52■□□□□ 0.88
CDC42EP1-204ENST00000434728 ROCK1Q13464 1354 aa20.51■□□□□ 0.87
CDC42EP1-204ENST00000434728 IQGAP3Q86VI3 1631 aa20.51■□□□□ 0.87
CDC42EP1-204ENST00000434728 NUP155O75694 1391 aa20.5■□□□□ 0.87
CDC42EP1-204ENST00000434728 DIP2AQ14689 1571 aa20.5■□□□□ 0.87
CDC42EP1-204ENST00000434728 JCADQ9P266 1359 aa20.49■□□□□ 0.87
CDC42EP1-204ENST00000434728 ATF3P18847 181 aa20.48■□□□□ 0.87
CDC42EP1-204ENST00000434728 POTEAQ6S8J7 498 aa20.47■□□□□ 0.87
CDC42EP1-204ENST00000434728 NCOA3Q9Y6Q9 1424 aa20.46■□□□□ 0.87
CDC42EP1-204ENST00000434728 MEX3CQ5U5Q3 659 aaKnown RBP20.46■□□□□ 0.87
CDC42EP1-204ENST00000434728 CADPS2Q86UW7 1296 aa20.46■□□□□ 0.87
CDC42EP1-204ENST00000434728 TRPM2O94759 1503 aa20.46■□□□□ 0.87
CDC42EP1-204ENST00000434728 PIK3R4Q99570 1358 aa20.45■□□□□ 0.86
CDC42EP1-204ENST00000434728 C19orf44Q9H6X5 657 aa20.44■□□□□ 0.86
CDC42EP1-204ENST00000434728 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.44■□□□□ 0.86
CDC42EP1-204ENST00000434728 ADAMTS13Q76LX8 1427 aa20.44■□□□□ 0.86
CDC42EP1-204ENST00000434728 ZNF326Q5BKZ1 582 aaKnown RBP20.43■□□□□ 0.86
CDC42EP1-204ENST00000434728 COL16A1Q07092 1604 aaPredicted RBP20.42■□□□□ 0.86
CDC42EP1-204ENST00000434728 PPARGC1BQ86YN6 1023 aaKnown RBP20.41■□□□□ 0.86
CDC42EP1-204ENST00000434728 AMOTL2Q9Y2J4 779 aa20.41■□□□□ 0.86
CDC42EP1-204ENST00000434728 SPHKAPQ2M3C7 1700 aa20.4■□□□□ 0.86
CDC42EP1-204ENST00000434728 SPATA31A6Q5VVP1 1343 aa20.39■□□□□ 0.85
CDC42EP1-204ENST00000434728 SETD1AO15047 1707 aaKnown RBP20.37■□□□□ 0.85
CDC42EP1-204ENST00000434728 AHDC1Q5TGY3 1603 aaPredicted RBP20.36■□□□□ 0.85
CDC42EP1-204ENST00000434728 ZNF772Q68DY9 489 aaPredicted RBP20.34■□□□□ 0.85
CDC42EP1-204ENST00000434728 SHPRHQ149N8 1683 aa20.34■□□□□ 0.85
CDC42EP1-204ENST00000434728 PTPRUQ92729 1446 aa20.34■□□□□ 0.85
CDC42EP1-204ENST00000434728 DCCP43146 1447 aa20.33■□□□□ 0.84
CDC42EP1-204ENST00000434728 LRP6O75581 1613 aa20.32■□□□□ 0.84
CDC42EP1-204ENST00000434728 NUTM2BA6NNL0 878 aaPredicted RBP20.32■□□□□ 0.84
CDC42EP1-204ENST00000434728 NUTM2EB1AL46 878 aaPredicted RBP20.32■□□□□ 0.84
CDC42EP1-204ENST00000434728 BRINP3Q76B58 766 aa20.32■□□□□ 0.84
CDC42EP1-204ENST00000434728 NUTM2AQ8IVF1 878 aaPredicted RBP20.32■□□□□ 0.84
CDC42EP1-204ENST00000434728 SETBP1Q9Y6X0 1596 aa20.32■□□□□ 0.84
CDC42EP1-204ENST00000434728 XRN1Q8IZH2 1706 aaKnown RBP20.31■□□□□ 0.84
CDC42EP1-204ENST00000434728 NRXN3Q9Y4C0 1643 aa20.31■□□□□ 0.84
CDC42EP1-204ENST00000434728 TRIM52Q96A61 297 aa20.29■□□□□ 0.84
CDC42EP1-204ENST00000434728 KIF1BO60333 1816 aa20.29■□□□□ 0.84
CDC42EP1-204ENST00000434728 ASXL1Q8IXJ9 1541 aa20.28■□□□□ 0.84
CDC42EP1-204ENST00000434728 CLTCL1P53675 1640 aa20.27■□□□□ 0.83
CDC42EP1-204ENST00000434728 METP08581 1390 aa20.26■□□□□ 0.83
CDC42EP1-204ENST00000434728 MST1RQ04912 1400 aa20.25■□□□□ 0.83
CDC42EP1-204ENST00000434728 NEXMIFQ5QGS0 1516 aa20.24■□□□□ 0.83
CDC42EP1-204ENST00000434728 ADGRL3Q9HAR2 1447 aa20.24■□□□□ 0.83
CDC42EP1-204ENST00000434728 RXRBP28702 533 aa20.23■□□□□ 0.83
CDC42EP1-204ENST00000434728 LRRC59Q96AG4 307 aaKnown RBP20.23■□□□□ 0.83
CDC42EP1-204ENST00000434728 NHSL1Q5SYE7 1610 aa20.22■□□□□ 0.83
CDC42EP1-204ENST00000434728 NALCNQ8IZF0 1738 aa20.22■□□□□ 0.83
CDC42EP1-204ENST00000434728 SETD5Q9C0A6 1442 aa20.2■□□□□ 0.82
CDC42EP1-204ENST00000434728 AFF2P51816 1311 aa20.2■□□□□ 0.82
CDC42EP1-204ENST00000434728 VGFO15240 615 aaPredicted RBP20.19■□□□□ 0.82
CDC42EP1-204ENST00000434728 NAIPQ13075 1403 aa20.19■□□□□ 0.82
CDC42EP1-204ENST00000434728 DDX17Q92841 729 aaKnown RBP20.18■□□□□ 0.82
CDC42EP1-204ENST00000434728 C8orf37Q96NL8 207 aa20.18■□□□□ 0.82
CDC42EP1-204ENST00000434728 RRBP1Q9P2E9 1410 aaKnown RBP20.18■□□□□ 0.82
CDC42EP1-204ENST00000434728 UPF1Q92900 1129 aaKnown RBP eCLIP20.15■□□□□ 0.82
CDC42EP1-204ENST00000434728 SLC4A1APQ9BWU0 796 aaKnown RBP20.15■□□□□ 0.82
CDC42EP1-204ENST00000434728 PTCH1Q13635 1447 aa20.14■□□□□ 0.81
CDC42EP1-204ENST00000434728 PNPLA6Q8IY17 1366 aa20.14■□□□□ 0.81
CDC42EP1-204ENST00000434728 C1orf167Q5SNV9 1468 aa20.13■□□□□ 0.81
CDC42EP1-204ENST00000434728 CDK12Q9NYV4 1490 aaPredicted RBP20.12■□□□□ 0.81
CDC42EP1-204ENST00000434728 RPGRIP1LQ68CZ1 1315 aa20.12■□□□□ 0.81
CDC42EP1-204ENST00000434728 HFM1A2PYH4 1435 aa20.11■□□□□ 0.81
CDC42EP1-204ENST00000434728 ADAMTS2O95450 1211 aa20.11■□□□□ 0.81
CDC42EP1-204ENST00000434728 NGLY1Q96IV0 654 aa20.11■□□□□ 0.81
CDC42EP1-204ENST00000434728 QTRT2Q9H974 415 aaKnown RBP20.11■□□□□ 0.81
CDC42EP1-204ENST00000434728 ROBO2Q9HCK4 1378 aa20.1■□□□□ 0.81
CDC42EP1-204ENST00000434728 PPLO60437 1756 aa20.09■□□□□ 0.81
CDC42EP1-204ENST00000434728 RBM6P78332 1123 aaKnown RBP20.08■□□□□ 0.81
CDC42EP1-204ENST00000434728 ORAI2Q96SN7 254 aa20.08■□□□□ 0.81
CDC42EP1-204ENST00000434728 RGS12O14924 1447 aa20.04■□□□□ 0.8
CDC42EP1-204ENST00000434728 LAMC1P11047 1609 aa20.04■□□□□ 0.8
CDC42EP1-204ENST00000434728 CCDC144AA2RUR9 1427 aa20.03■□□□□ 0.8
CDC42EP1-204ENST00000434728 FOXD1Q16676 465 aa20.03■□□□□ 0.8
CDC42EP1-204ENST00000434728 ESCO1Q5FWF5 840 aa20.03■□□□□ 0.8
CDC42EP1-204ENST00000434728 SOS2Q07890 1332 aaPredicted RBP20.02■□□□□ 0.8
CDC42EP1-204ENST00000434728 USP21Q9UK80 565 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms