RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 DIP2CQ9Y2E4 1556 aa32.23■■■□□ 2.75
MBD3-202ENST00000434436 WASHC2CQ9Y4E1 1318 aa32.23■■■□□ 2.75
MBD3-202ENST00000434436 ABCC3O15438 1527 aa32.22■■■□□ 2.75
MBD3-202ENST00000434436 ADGRB3O60242 1522 aa32.22■■■□□ 2.75
MBD3-202ENST00000434436 CYB5RLQ6IPT4 315 aa32.21■■■□□ 2.75
MBD3-202ENST00000434436 CFAP70Q5T0N1 1121 aa32.19■■■□□ 2.74
MBD3-202ENST00000434436 NLRP13Q86W25 1043 aa32.19■■■□□ 2.74
MBD3-202ENST00000434436 NRXN1Q9ULB1 1477 aa32.19■■■□□ 2.74
MBD3-202ENST00000434436 IRX6P78412 446 aaPredicted RBP32.18■■■□□ 2.74
MBD3-202ENST00000434436 GLI2P10070 1586 aa32.17■■■□□ 2.74
MBD3-202ENST00000434436 CAMSAP1Q5T5Y3 1602 aa32.16■■■□□ 2.74
MBD3-202ENST00000434436 RIMBP3CA6NJZ7 1639 aa32.15■■■□□ 2.74
MBD3-202ENST00000434436 RIMBP3BA6NNM3 1639 aa32.15■■■□□ 2.74
MBD3-202ENST00000434436 RIMBP3Q9UFD9 1639 aa32.15■■■□□ 2.74
MBD3-202ENST00000434436 EIF3AQ14152 1382 aaKnown RBP32.15■■■□□ 2.74
MBD3-202ENST00000434436 CC2D1BQ5T0F9 858 aaKnown RBP32.15■■■□□ 2.74
MBD3-202ENST00000434436 SMG6Q86US8 1419 aaKnown RBP32.14■■■□□ 2.74
MBD3-202ENST00000434436 NOS1P29475 1434 aa32.13■■■□□ 2.73
MBD3-202ENST00000434436 SIGLEC1Q9BZZ2 1709 aa32.12■■■□□ 2.73
MBD3-202ENST00000434436 TSHZ2Q9NRE2 1034 aa32.11■■■□□ 2.73
MBD3-202ENST00000434436 PPLO60437 1756 aa32.11■■■□□ 2.73
MBD3-202ENST00000434436 SYNMO15061 1565 aa32.11■■■□□ 2.73
MBD3-202ENST00000434436 CHGAP10645 457 aaKnown RBP32.1■■■□□ 2.73
MBD3-202ENST00000434436 CDCA8Q53HL2 280 aa32.1■■■□□ 2.73
MBD3-202ENST00000434436 MYOM1P52179 1685 aa32.09■■■□□ 2.73
MBD3-202ENST00000434436 SENP3-EIF4A1A0A087X0R7 540 aa32.09■■■□□ 2.73
MBD3-202ENST00000434436 YEATS2Q9ULM3 1422 aa32.09■■■□□ 2.73
MBD3-202ENST00000434436 NUDCQ9Y266 331 aa32.06■■■□□ 2.72
MBD3-202ENST00000434436 ERICH6BQ5W0A0 696 aa32.05■■■□□ 2.72
MBD3-202ENST00000434436 KDM5AP29375 1690 aaKnown RBP32.05■■■□□ 2.72
MBD3-202ENST00000434436 PIK3C2BO00750 1634 aa32.03■■■□□ 2.72
MBD3-202ENST00000434436 SETBP1Q9Y6X0 1596 aa32.03■■■□□ 2.72
MBD3-202ENST00000434436 MYO3AQ8NEV4 1616 aa32.02■■■□□ 2.72
MBD3-202ENST00000434436 PIK3C2GO75747 1445 aa32.02■■■□□ 2.72
MBD3-202ENST00000434436 ZC3H13Q5T200 1668 aaKnown RBP32.01■■■□□ 2.71
MBD3-202ENST00000434436 ERVK-7P63135 1459 aa32.01■■■□□ 2.71
MBD3-202ENST00000434436 DIP2BQ9P265 1576 aa32.01■■■□□ 2.71
MBD3-202ENST00000434436 KNSTRNQ9Y448 316 aa31.99■■■□□ 2.71
MBD3-202ENST00000434436 ARHGAP31Q2M1Z3 1444 aa31.99■■■□□ 2.71
MBD3-202ENST00000434436 AMER1Q5JTC6 1135 aaPredicted RBP31.98■■■□□ 2.71
MBD3-202ENST00000434436 RPGRIP1LQ68CZ1 1315 aa31.98■■■□□ 2.71
MBD3-202ENST00000434436 FAM69CQ0P6D2 419 aa31.97■■■□□ 2.71
MBD3-202ENST00000434436 C14orf93Q9H972 538 aaKnown RBP31.96■■■□□ 2.71
MBD3-202ENST00000434436 ZMYM4Q5VZL5 1548 aa31.95■■■□□ 2.71
MBD3-202ENST00000434436 SLC24A1O60721 1099 aa31.95■■■□□ 2.7
MBD3-202ENST00000434436 ASXL1Q8IXJ9 1541 aa31.94■■■□□ 2.7
MBD3-202ENST00000434436 ADGRB1O14514 1584 aa31.94■■■□□ 2.7
MBD3-202ENST00000434436 SBNO2Q9Y2G9 1366 aa31.92■■■□□ 2.7
MBD3-202ENST00000434436 TSPOAP1O95153 1857 aa31.92■■■□□ 2.7
MBD3-202ENST00000434436 PPP4R2Q9NY27 417 aa31.91■■■□□ 2.7
MBD3-202ENST00000434436 INSRP06213 1382 aa31.91■■■□□ 2.7
MBD3-202ENST00000434436 RNF123Q5XPI4 1314 aa31.9■■■□□ 2.7
MBD3-202ENST00000434436 NEXMIFQ5QGS0 1516 aa31.9■■■□□ 2.7
MBD3-202ENST00000434436 BLMP54132 1417 aaPredicted RBP31.89■■■□□ 2.69
MBD3-202ENST00000434436 PPP2R1AP30153 589 aa31.88■■■□□ 2.69
MBD3-202ENST00000434436 CENPJQ9HC77 1338 aaPredicted RBP31.88■■■□□ 2.69
MBD3-202ENST00000434436 NPC1L1Q9UHC9 1359 aa31.88■■■□□ 2.69
MBD3-202ENST00000434436 TRAK1Q9UPV9 953 aa31.86■■■□□ 2.69
MBD3-202ENST00000434436 IDI1Q13907 227 aa31.85■■■□□ 2.69
MBD3-202ENST00000434436 TMEM132EQ6IEE7 984 aa31.85■■■□□ 2.69
MBD3-202ENST00000434436 PREX1Q8TCU6 1659 aa31.85■■■□□ 2.69
MBD3-202ENST00000434436 QRICH2Q9H0J4 1663 aa31.85■■■□□ 2.69
MBD3-202ENST00000434436 SALL2Q9Y467 1007 aaPredicted RBP31.83■■■□□ 2.69
MBD3-202ENST00000434436 NUTM2DQ5VT03 806 aaPredicted RBP31.82■■■□□ 2.68
MBD3-202ENST00000434436 MYO5BQ9ULV0 1848 aa31.81■■■□□ 2.68
MBD3-202ENST00000434436 VGFO15240 615 aaPredicted RBP31.8■■■□□ 2.68
MBD3-202ENST00000434436 SLC52A1Q9NWF4 448 aa31.8■■■□□ 2.68
MBD3-202ENST00000434436 CARD14Q9BXL6 1004 aa31.79■■■□□ 2.68
MBD3-202ENST00000434436 PDE3BQ13370 1112 aa31.77■■■□□ 2.68
MBD3-202ENST00000434436 ADAMTS8Q9UP79 889 aa31.76■■■□□ 2.67
MBD3-202ENST00000434436 TMEM131LA2VDJ0 1609 aa31.76■■■□□ 2.67
MBD3-202ENST00000434436 REREQ9P2R6 1566 aa31.74■■■□□ 2.67
MBD3-202ENST00000434436 ZFYVE9O95405 1425 aa31.74■■■□□ 2.67
MBD3-202ENST00000434436 ARHGEF28Q8N1W1 1705 aaKnown RBP31.73■■■□□ 2.67
MBD3-202ENST00000434436 B4GALNT3Q6L9W6 998 aa31.73■■■□□ 2.67
MBD3-202ENST00000434436 AGLP35573 1532 aa31.7■■■□□ 2.67
MBD3-202ENST00000434436 FBXO31Q5XUX0 539 aaPredicted RBP31.7■■■□□ 2.67
MBD3-202ENST00000434436 CDCA7LQ96GN5 454 aa31.69■■■□□ 2.66
MBD3-202ENST00000434436 WDR43Q15061 677 aaKnown RBP eCLIP31.66■■■□□ 2.66
MBD3-202ENST00000434436 SLC12A5Q9H2X9 1139 aa31.64■■■□□ 2.65
MBD3-202ENST00000434436 KIF13AQ9H1H9 1805 aa31.63■■■□□ 2.65
MBD3-202ENST00000434436 RCAN3Q9UKA8 241 aa31.63■■■□□ 2.65
MBD3-202ENST00000434436 TULP4Q9NRJ4 1543 aa31.62■■■□□ 2.65
MBD3-202ENST00000434436 CLTCQ00610 1675 aaKnown RBP31.62■■■□□ 2.65
MBD3-202ENST00000434436 NSD3Q9BZ95 1437 aa31.61■■■□□ 2.65
MBD3-202ENST00000434436 RRP1P56182 461 aaKnown RBP31.6■■■□□ 2.65
MBD3-202ENST00000434436 PPP6R1Q9UPN7 881 aa31.6■■■□□ 2.65
MBD3-202ENST00000434436 RBM19Q9Y4C8 960 aaKnown RBP31.6■■■□□ 2.65
MBD3-202ENST00000434436 PUS7Q96PZ0 661 aaKnown RBP31.57■■■□□ 2.64
MBD3-202ENST00000434436 SENP3Q9H4L4 574 aaPredicted RBP31.57■■■□□ 2.64
MBD3-202ENST00000434436 EVC2Q86UK5 1308 aa31.57■■■□□ 2.64
MBD3-202ENST00000434436 PLEKHH1Q9ULM0 1364 aa31.56■■■□□ 2.64
MBD3-202ENST00000434436 USP32Q8NFA0 1604 aa31.54■■■□□ 2.64
MBD3-202ENST00000434436 ARHGEF40Q8TER5 1519 aa31.52■■■□□ 2.64
MBD3-202ENST00000434436 STK26Q9P289 416 aa31.52■■■□□ 2.64
MBD3-202ENST00000434436 SPATA31D1Q6ZQQ2 1576 aa31.51■■■□□ 2.64
MBD3-202ENST00000434436 PTPRMP28827 1452 aa31.5■■■□□ 2.63
MBD3-202ENST00000434436 ZNF521Q96K83 1311 aa31.5■■■□□ 2.63
MBD3-202ENST00000434436 SAFB2Q14151 953 aaKnown RBP eCLIP31.5■■■□□ 2.63
MBD3-202ENST00000434436 MLECQ14165 292 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms