RNA–Protein interactions for RNA: ENST00000434152.5

APOE-203, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-203ENST00000434152 BCANQ96GW7 911 aa30.4■■■□□ 2.46
APOE-203ENST00000434152 ALKQ9UM73 1620 aa30.4■■■□□ 2.46
APOE-203ENST00000434152 CHGAP10645 457 aaKnown RBP30.39■■■□□ 2.46
APOE-203ENST00000434152 ILDR2Q71H61 639 aa30.39■■■□□ 2.46
APOE-203ENST00000434152 HDGFP51858 240 aaKnown RBP30.38■■■□□ 2.45
APOE-203ENST00000434152 SENP3Q9H4L4 574 aaPredicted RBP30.38■■■□□ 2.45
APOE-203ENST00000434152 ZFYVE9O95405 1425 aa30.35■■■□□ 2.45
APOE-203ENST00000434152 SETD5Q9C0A6 1442 aa30.35■■■□□ 2.45
APOE-203ENST00000434152 RIMS2Q9UQ26 1411 aa30.34■■■□□ 2.45
APOE-203ENST00000434152 PPP1R15AO75807 674 aaPredicted RBP30.33■■■□□ 2.45
APOE-203ENST00000434152 TMEM131LA2VDJ0 1609 aa30.32■■■□□ 2.44
APOE-203ENST00000434152 PROSER2Q86WR7 435 aaPredicted RBP30.31■■■□□ 2.44
APOE-203ENST00000434152 PLEKHG1Q9ULL1 1385 aa30.3■■■□□ 2.44
APOE-203ENST00000434152 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.3■■■□□ 2.44
APOE-203ENST00000434152 TMEM94Q12767 1356 aa30.29■■■□□ 2.44
APOE-203ENST00000434152 NUTM2DQ5VT03 806 aaPredicted RBP30.29■■■□□ 2.44
APOE-203ENST00000434152 RBM33Q96EV2 1170 aaKnown RBP30.29■■■□□ 2.44
APOE-203ENST00000434152 TRIM52Q96A61 297 aa30.27■■■□□ 2.44
APOE-203ENST00000434152 SPHKAPQ2M3C7 1700 aa30.25■■■□□ 2.43
APOE-203ENST00000434152 MYO5BQ9ULV0 1848 aa30.25■■■□□ 2.43
APOE-203ENST00000434152 TBX22Q9Y458 520 aa30.25■■■□□ 2.43
APOE-203ENST00000434152 HRCP23327 699 aa30.23■■■□□ 2.43
APOE-203ENST00000434152 XIRP1Q702N8 1843 aaKnown RBP30.22■■■□□ 2.43
APOE-203ENST00000434152 RAB3GAP2Q9H2M9 1393 aa30.2■■■□□ 2.43
APOE-203ENST00000434152 SLC4A1APQ9BWU0 796 aaKnown RBP30.2■■■□□ 2.43
APOE-203ENST00000434152 ADAMTS13Q76LX8 1427 aa30.16■■■□□ 2.42
APOE-203ENST00000434152 NKTRP30414 1462 aaKnown RBP30.16■■■□□ 2.42
APOE-203ENST00000434152 TRPM2O94759 1503 aa30.16■■■□□ 2.42
APOE-203ENST00000434152 NWD1Q149M9 1564 aa30.15■■■□□ 2.42
APOE-203ENST00000434152 FAM135BQ49AJ0 1406 aa30.13■■■□□ 2.41
APOE-203ENST00000434152 SOCS7O14512 581 aa30.12■■■□□ 2.41
APOE-203ENST00000434152 MPHOSPH9Q99550 1183 aa30.12■■■□□ 2.41
APOE-203ENST00000434152 ZNF326Q5BKZ1 582 aaKnown RBP30.11■■■□□ 2.41
APOE-203ENST00000434152 MSH6P52701 1360 aa30.09■■■□□ 2.41
APOE-203ENST00000434152 MED1Q15648 1581 aaPredicted RBP30.08■■■□□ 2.41
APOE-203ENST00000434152 CHD2O14647 1828 aaKnown RBP30.08■■■□□ 2.41
APOE-203ENST00000434152 PIK3R4Q99570 1358 aa30.07■■■□□ 2.4
APOE-203ENST00000434152 SLAIN2Q9P270 581 aa30.06■■■□□ 2.4
APOE-203ENST00000434152 CLTCL1P53675 1640 aa30.05■■■□□ 2.4
APOE-203ENST00000434152 AMOTL2Q9Y2J4 779 aa30.05■■■□□ 2.4
APOE-203ENST00000434152 KIF1BO60333 1816 aa30.03■■■□□ 2.4
APOE-203ENST00000434152 NCOA3Q9Y6Q9 1424 aa30.02■■■□□ 2.4
APOE-203ENST00000434152 DIP2AQ14689 1571 aa30.02■■■□□ 2.4
APOE-203ENST00000434152 C14orf37Q86TY3 774 aa30.01■■■□□ 2.39
APOE-203ENST00000434152 PTPRUQ92729 1446 aa30■■■□□ 2.39
APOE-203ENST00000434152 TRIM26Q12899 539 aaPredicted RBP30■■■□□ 2.39
APOE-203ENST00000434152 PHF23Q9BUL5 403 aaPredicted RBP29.98■■■□□ 2.39
APOE-203ENST00000434152 C19orf44Q9H6X5 657 aa29.97■■■□□ 2.39
APOE-203ENST00000434152 ROBO1Q9Y6N7 1651 aa29.94■■■□□ 2.38
APOE-203ENST00000434152 METP08581 1390 aa29.93■■■□□ 2.38
APOE-203ENST00000434152 FOXD1Q16676 465 aa29.93■■■□□ 2.38
APOE-203ENST00000434152 CCDC144AA2RUR9 1427 aa29.93■■■□□ 2.38
APOE-203ENST00000434152 SETBP1Q9Y6X0 1596 aa29.93■■■□□ 2.38
APOE-203ENST00000434152 CADPS2Q86UW7 1296 aa29.92■■■□□ 2.38
APOE-203ENST00000434152 NRXN3Q9Y4C0 1643 aa29.92■■■□□ 2.38
APOE-203ENST00000434152 ATF3P18847 181 aa29.91■■■□□ 2.38
APOE-203ENST00000434152 NEXMIFQ5QGS0 1516 aa29.91■■■□□ 2.38
APOE-203ENST00000434152 VGFO15240 615 aaPredicted RBP29.89■■■□□ 2.38
APOE-203ENST00000434152 RPGRIP1LQ68CZ1 1315 aa29.86■■■□□ 2.37
APOE-203ENST00000434152 RGS17Q9UGC6 210 aaPredicted RBP29.84■■■□□ 2.37
APOE-203ENST00000434152 ANKRD30BQ9BXX2 1392 aa29.83■■■□□ 2.37
APOE-203ENST00000434152 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.82■■■□□ 2.36
APOE-203ENST00000434152 SPATA31E1Q6ZUB1 1445 aa29.81■■■□□ 2.36
APOE-203ENST00000434152 XRN1Q8IZH2 1706 aaKnown RBP29.79■■■□□ 2.36
APOE-203ENST00000434152 PPLO60437 1756 aa29.78■■■□□ 2.36
APOE-203ENST00000434152 BRINP3Q76B58 766 aa29.76■■■□□ 2.35
APOE-203ENST00000434152 JCADQ9P266 1359 aa29.76■■■□□ 2.35
APOE-203ENST00000434152 RGL3Q3MIN7 710 aa29.75■■■□□ 2.35
APOE-203ENST00000434152 PHLPP1O60346 1717 aa29.74■■■□□ 2.35
APOE-203ENST00000434152 DCCP43146 1447 aa29.74■■■□□ 2.35
APOE-203ENST00000434152 IFT172Q9UG01 1749 aa29.74■■■□□ 2.35
APOE-203ENST00000434152 ADGRF5Q8IZF2 1346 aa29.7■■■□□ 2.34
APOE-203ENST00000434152 MST1RQ04912 1400 aa29.69■■■□□ 2.34
APOE-203ENST00000434152 ADGRL3Q9HAR2 1447 aa29.69■■■□□ 2.34
APOE-203ENST00000434152 COL16A1Q07092 1604 aaPredicted RBP29.68■■■□□ 2.34
APOE-203ENST00000434152 ROBO2Q9HCK4 1378 aa29.68■■■□□ 2.34
APOE-203ENST00000434152 POTEAQ6S8J7 498 aa29.66■■■□□ 2.34
APOE-203ENST00000434152 AHDC1Q5TGY3 1603 aaPredicted RBP29.65■■■□□ 2.34
APOE-203ENST00000434152 PTCH1Q13635 1447 aa29.63■■■□□ 2.33
APOE-203ENST00000434152 SPATA31A6Q5VVP1 1343 aa29.63■■■□□ 2.33
APOE-203ENST00000434152 SETD1AO15047 1707 aaKnown RBP29.62■■■□□ 2.33
APOE-203ENST00000434152 ASXL1Q8IXJ9 1541 aa29.61■■■□□ 2.33
APOE-203ENST00000434152 DDX17Q92841 729 aaKnown RBP29.59■■■□□ 2.33
APOE-203ENST00000434152 STAC3Q96MF2 364 aa29.59■■■□□ 2.33
APOE-203ENST00000434152 PRAG1Q86YV5 1406 aa29.59■■■□□ 2.33
APOE-203ENST00000434152 MYOM2P54296 1465 aa29.59■■■□□ 2.33
APOE-203ENST00000434152 DHX57Q6P158 1386 aaKnown RBP29.58■■■□□ 2.33
APOE-203ENST00000434152 STK26Q9P289 416 aa29.56■■■□□ 2.32
APOE-203ENST00000434152 NALCNQ8IZF0 1738 aa29.56■■■□□ 2.32
APOE-203ENST00000434152 C1orf167Q5SNV9 1468 aa29.55■■■□□ 2.32
APOE-203ENST00000434152 NRXN1Q9ULB1 1477 aa29.55■■■□□ 2.32
APOE-203ENST00000434152 TMEM132EQ6IEE7 984 aa29.55■■■□□ 2.32
APOE-203ENST00000434152 LRRC59Q96AG4 307 aaKnown RBP29.55■■■□□ 2.32
APOE-203ENST00000434152 LRP6O75581 1613 aa29.54■■■□□ 2.32
APOE-203ENST00000434152 MEX3CQ5U5Q3 659 aaKnown RBP29.54■■■□□ 2.32
APOE-203ENST00000434152 ORAI2Q96SN7 254 aa29.54■■■□□ 2.32
APOE-203ENST00000434152 PIK3C2GO75747 1445 aa29.54■■■□□ 2.32
APOE-203ENST00000434152 NUTM2BA6NNL0 878 aaPredicted RBP29.52■■■□□ 2.32
APOE-203ENST00000434152 NUTM2EB1AL46 878 aaPredicted RBP29.52■■■□□ 2.32
APOE-203ENST00000434152 NUTM2AQ8IVF1 878 aaPredicted RBP29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms