RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 KDM5AP29375 1690 aaKnown RBP22.21■■□□□ 1.15
CNOT9-205ENST00000433439 TMEM2Q9UHN6 1383 aa22.2■■□□□ 1.14
CNOT9-205ENST00000433439 RIMS2Q9UQ26 1411 aa22.2■■□□□ 1.14
CNOT9-205ENST00000433439 PPP1R15AO75807 674 aaPredicted RBP22.19■■□□□ 1.14
CNOT9-205ENST00000433439 TXNDC2Q86VQ3 553 aa22.19■■□□□ 1.14
CNOT9-205ENST00000433439 EID1Q9Y6B2 187 aa22.19■■□□□ 1.14
CNOT9-205ENST00000433439 KDM2AQ9Y2K7 1162 aa22.18■■□□□ 1.14
CNOT9-205ENST00000433439 TONSLQ96HA7 1378 aa22.17■■□□□ 1.14
CNOT9-205ENST00000433439 ANKLE2Q86XL3 938 aa22.17■■□□□ 1.14
CNOT9-205ENST00000433439 NCKAP5LQ9HCH0 1330 aa22.16■■□□□ 1.14
CNOT9-205ENST00000433439 HDGFP51858 240 aaKnown RBP22.16■■□□□ 1.14
CNOT9-205ENST00000433439 DCAF11Q8TEB1 546 aa22.16■■□□□ 1.14
CNOT9-205ENST00000433439 LTKP29376 864 aa22.15■■□□□ 1.14
CNOT9-205ENST00000433439 BCANQ96GW7 911 aa22.15■■□□□ 1.14
CNOT9-205ENST00000433439 SLIT1O75093 1534 aa22.15■■□□□ 1.14
CNOT9-205ENST00000433439 RPGRIP1LQ68CZ1 1315 aa22.14■■□□□ 1.14
CNOT9-205ENST00000433439 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.14■■□□□ 1.13
CNOT9-205ENST00000433439 L3MBTL2Q969R5 705 aa22.14■■□□□ 1.13
CNOT9-205ENST00000433439 ARHGAP23Q9P227 1491 aa22.14■■□□□ 1.13
CNOT9-205ENST00000433439 NEXMIFQ5QGS0 1516 aa22.13■■□□□ 1.13
CNOT9-205ENST00000433439 ZFYVE9O95405 1425 aa22.13■■□□□ 1.13
CNOT9-205ENST00000433439 NEURL4Q96JN8 1562 aa22.12■■□□□ 1.13
CNOT9-205ENST00000433439 SCAF11Q99590 1463 aaKnown RBP22.12■■□□□ 1.13
CNOT9-205ENST00000433439 PPLO60437 1756 aa22.11■■□□□ 1.13
CNOT9-205ENST00000433439 VGFO15240 615 aaPredicted RBP22.1■■□□□ 1.13
CNOT9-205ENST00000433439 POLR1AO95602 1720 aaPredicted RBP22.09■■□□□ 1.13
CNOT9-205ENST00000433439 ADGRF5Q8IZF2 1346 aa22.08■■□□□ 1.13
CNOT9-205ENST00000433439 IFT172Q9UG01 1749 aa22.08■■□□□ 1.12
CNOT9-205ENST00000433439 NPHP4O75161 1426 aaPredicted RBP22.05■■□□□ 1.12
CNOT9-205ENST00000433439 STRCQ7RTU9 1775 aa22.04■■□□□ 1.12
CNOT9-205ENST00000433439 PLEKHG1Q9ULL1 1385 aa22.03■■□□□ 1.12
CNOT9-205ENST00000433439 MYOM2P54296 1465 aa22.03■■□□□ 1.12
CNOT9-205ENST00000433439 SLC26A8Q96RN1 970 aa22.02■■□□□ 1.12
CNOT9-205ENST00000433439 STAC3Q96MF2 364 aa22■■□□□ 1.11
CNOT9-205ENST00000433439 IQGAP1P46940 1657 aa22■■□□□ 1.11
CNOT9-205ENST00000433439 TIMELESSQ9UNS1 1208 aa21.99■■□□□ 1.11
CNOT9-205ENST00000433439 MED14O60244 1454 aa21.98■■□□□ 1.11
CNOT9-205ENST00000433439 CFAP70Q5T0N1 1121 aa21.97■■□□□ 1.11
CNOT9-205ENST00000433439 DMRT2Q9Y5R5 561 aa21.97■■□□□ 1.11
CNOT9-205ENST00000433439 PIK3C2GO75747 1445 aa21.97■■□□□ 1.11
CNOT9-205ENST00000433439 PRAG1Q86YV5 1406 aa21.96■■□□□ 1.11
CNOT9-205ENST00000433439 NBPF8Q3BBV2 869 aa21.95■■□□□ 1.1
CNOT9-205ENST00000433439 ADAMTS13Q76LX8 1427 aa21.95■■□□□ 1.1
CNOT9-205ENST00000433439 NRXN1Q9ULB1 1477 aa21.95■■□□□ 1.1
CNOT9-205ENST00000433439 SETBP1Q9Y6X0 1596 aa21.95■■□□□ 1.1
CNOT9-205ENST00000433439 NRXN3Q9Y4C0 1643 aa21.95■■□□□ 1.1
CNOT9-205ENST00000433439 ALKQ9UM73 1620 aa21.93■■□□□ 1.1
CNOT9-205ENST00000433439 C14orf93Q9H972 538 aaKnown RBP21.92■■□□□ 1.1
CNOT9-205ENST00000433439 TMEM132EQ6IEE7 984 aa21.91■■□□□ 1.1
CNOT9-205ENST00000433439 TBX22Q9Y458 520 aa21.91■■□□□ 1.1
CNOT9-205ENST00000433439 METP08581 1390 aa21.88■■□□□ 1.09
CNOT9-205ENST00000433439 DIP2AQ14689 1571 aa21.88■■□□□ 1.09
CNOT9-205ENST00000433439 NBPF1Q3BBV0 1214 aa21.88■■□□□ 1.09
CNOT9-205ENST00000433439 STK26Q9P289 416 aa21.87■■□□□ 1.09
CNOT9-205ENST00000433439 LAMC1P11047 1609 aa21.87■■□□□ 1.09
CNOT9-205ENST00000433439 SETD1AO15047 1707 aaKnown RBP21.86■■□□□ 1.09
CNOT9-205ENST00000433439 TRPM1Q7Z4N2 1603 aa21.85■■□□□ 1.09
CNOT9-205ENST00000433439 ROCK2O75116 1388 aaKnown RBP21.85■■□□□ 1.09
CNOT9-205ENST00000433439 ZNF335Q9H4Z2 1342 aaPredicted RBP21.84■■□□□ 1.09
CNOT9-205ENST00000433439 AMOTL2Q9Y2J4 779 aa21.83■■□□□ 1.09
CNOT9-205ENST00000433439 ASXL1Q8IXJ9 1541 aa21.83■■□□□ 1.09
CNOT9-205ENST00000433439 KIAA1210Q9ULL0 1709 aa21.83■■□□□ 1.08
CNOT9-205ENST00000433439 ZEB1P37275 1124 aaPredicted RBP21.82■■□□□ 1.08
CNOT9-205ENST00000433439 PTPRUQ92729 1446 aa21.81■■□□□ 1.08
CNOT9-205ENST00000433439 RALGAPBQ86X10 1494 aa21.8■■□□□ 1.08
CNOT9-205ENST00000433439 PIK3R4Q99570 1358 aa21.8■■□□□ 1.08
CNOT9-205ENST00000433439 KCNA6P17658 529 aa21.8■■□□□ 1.08
CNOT9-205ENST00000433439 CARD11Q9BXL7 1154 aa21.8■■□□□ 1.08
CNOT9-205ENST00000433439 TRAK1Q9UPV9 953 aa21.8■■□□□ 1.08
CNOT9-205ENST00000433439 YTHDC2Q9H6S0 1430 aaKnown RBP21.8■■□□□ 1.08
CNOT9-205ENST00000433439 ADGRB1O14514 1584 aa21.78■■□□□ 1.08
CNOT9-205ENST00000433439 CHD2O14647 1828 aaKnown RBP21.78■■□□□ 1.08
CNOT9-205ENST00000433439 LRPPRCP42704 1394 aaKnown RBP21.77■■□□□ 1.08
CNOT9-205ENST00000433439 STRCP1A6NGW2 1772 aa21.75■■□□□ 1.07
CNOT9-205ENST00000433439 PROSER2Q86WR7 435 aaPredicted RBP21.75■■□□□ 1.07
CNOT9-205ENST00000433439 RBM33Q96EV2 1170 aaKnown RBP21.75■■□□□ 1.07
CNOT9-205ENST00000433439 XRN1Q8IZH2 1706 aaKnown RBP21.73■■□□□ 1.07
CNOT9-205ENST00000433439 SAFB2Q14151 953 aaKnown RBP eCLIP21.73■■□□□ 1.07
CNOT9-205ENST00000433439 NWD1Q149M9 1564 aa21.73■■□□□ 1.07
CNOT9-205ENST00000433439 IQSEC2Q5JU85 1478 aa21.72■■□□□ 1.07
CNOT9-205ENST00000433439 POGKQ9P215 609 aa21.72■■□□□ 1.07
CNOT9-205ENST00000433439 ABCC11Q96J66 1382 aa21.72■■□□□ 1.07
CNOT9-205ENST00000433439 ROBO2Q9HCK4 1378 aa21.72■■□□□ 1.07
CNOT9-205ENST00000433439 WAPLQ7Z5K2 1190 aa21.71■■□□□ 1.07
CNOT9-205ENST00000433439 GPRASP1Q5JY77 1395 aa21.71■■□□□ 1.07
CNOT9-205ENST00000433439 LTBP4Q8N2S1 1624 aa21.7■■□□□ 1.06
CNOT9-205ENST00000433439 C14orf37Q86TY3 774 aa21.7■■□□□ 1.06
CNOT9-205ENST00000433439 PRAM1Q96QH2 718 aa21.7■■□□□ 1.06
CNOT9-205ENST00000433439 NKTRP30414 1462 aaKnown RBP21.69■■□□□ 1.06
CNOT9-205ENST00000433439 KNDC1Q76NI1 1749 aa21.69■■□□□ 1.06
CNOT9-205ENST00000433439 PLEKHH1Q9ULM0 1364 aa21.68■■□□□ 1.06
CNOT9-205ENST00000433439 CPS1P31327 1500 aa21.67■■□□□ 1.06
CNOT9-205ENST00000433439 TECPR2O15040 1411 aa21.67■■□□□ 1.06
CNOT9-205ENST00000433439 PTCH1Q13635 1447 aa21.66■■□□□ 1.06
CNOT9-205ENST00000433439 TMEM94Q12767 1356 aa21.66■■□□□ 1.06
CNOT9-205ENST00000433439 ARHGEF28Q8N1W1 1705 aaKnown RBP21.66■■□□□ 1.06
CNOT9-205ENST00000433439 DLC1Q96QB1 1528 aa21.65■■□□□ 1.06
CNOT9-205ENST00000433439 EIF3AQ14152 1382 aaKnown RBP21.65■■□□□ 1.06
CNOT9-205ENST00000433439 USP47Q96K76 1375 aa21.65■■□□□ 1.06
CNOT9-205ENST00000433439 LRRC7Q96NW7 1537 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms