RNA–Protein interactions for RNA: ENST00000433094.1

LINC00494-203, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best)

Gene LINC00494, Length 3,071 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-203ENST00000433094 MFAP1P55081 439 aaKnown RBP12.68□□□□□ -0.38
LINC00494-203ENST00000433094 PANK1Q8TE04 598 aa12.68□□□□□ -0.38
LINC00494-203ENST00000433094 TNPO1Q92973 898 aaKnown RBP12.68□□□□□ -0.38
LINC00494-203ENST00000433094 NCLP19338 710 aaKnown RBP12.67□□□□□ -0.38
LINC00494-203ENST00000433094 PDE3AQ14432 1141 aa12.67□□□□□ -0.38
LINC00494-203ENST00000433094 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
LINC00494-203ENST00000433094 UHRF1BP1Q6BDS2 1440 aa12.67□□□□□ -0.38
LINC00494-203ENST00000433094 KIAA1107Q9UPP5 1409 aa12.67□□□□□ -0.38
LINC00494-203ENST00000433094 DYNC1I1O14576 645 aa12.66□□□□□ -0.38
LINC00494-203ENST00000433094 XPCQ01831 940 aaPredicted RBP12.66□□□□□ -0.38
LINC00494-203ENST00000433094 UTP14CQ5TAP6 766 aaKnown RBP12.66□□□□□ -0.38
LINC00494-203ENST00000433094 PDZRN3Q9UPQ7 1066 aa12.66□□□□□ -0.38
LINC00494-203ENST00000433094 MAGI3Q5TCQ9 1506 aa12.66□□□□□ -0.38
LINC00494-203ENST00000433094 TNNT2P45379 298 aaPredicted RBP12.66□□□□□ -0.38
LINC00494-203ENST00000433094 DMTNQ08495 405 aa12.66□□□□□ -0.38
LINC00494-203ENST00000433094 PMFBP1Q8TBY8 1022 aa12.66□□□□□ -0.38
LINC00494-203ENST00000433094 SPINK5Q9NQ38 1064 aaPredicted RBP12.65□□□□□ -0.38
LINC00494-203ENST00000433094 PZPP20742 1482 aa12.65□□□□□ -0.38
LINC00494-203ENST00000433094 DAPK1P53355 1430 aa12.65□□□□□ -0.38
LINC00494-203ENST00000433094 ARID3CA6NKF2 412 aa12.65□□□□□ -0.38
LINC00494-203ENST00000433094 LRRIQ1Q96JM4 1722 aa12.64□□□□□ -0.39
LINC00494-203ENST00000433094 TRMT2AQ8IZ69 625 aaKnown RBP12.64□□□□□ -0.39
LINC00494-203ENST00000433094 ZNF644Q9H582 1327 aaPredicted RBP12.64□□□□□ -0.39
LINC00494-203ENST00000433094 PTMSP20962 102 aa12.63□□□□□ -0.39
LINC00494-203ENST00000433094 ZNF500O60304 480 aaPredicted RBP12.63□□□□□ -0.39
LINC00494-203ENST00000433094 ZSCAN20P17040 1043 aaPredicted RBP12.63□□□□□ -0.39
LINC00494-203ENST00000433094 NOL7Q9UMY1 257 aaKnown RBP12.63□□□□□ -0.39
LINC00494-203ENST00000433094 ABCC5O15440 1437 aa12.63□□□□□ -0.39
LINC00494-203ENST00000433094 CCDC146Q8IYE0 955 aa12.63□□□□□ -0.39
LINC00494-203ENST00000433094 CCDC94Q9BW85 323 aaPredicted RBP12.63□□□□□ -0.39
LINC00494-203ENST00000433094 NKTRP30414 1462 aaKnown RBP12.62□□□□□ -0.39
LINC00494-203ENST00000433094 E9PCH4 1651 aa12.62□□□□□ -0.39
LINC00494-203ENST00000433094 HS1BP3Q53T59 392 aa12.62□□□□□ -0.39
LINC00494-203ENST00000433094 ZNF608Q9ULD9 1512 aaPredicted RBP12.62□□□□□ -0.39
LINC00494-203ENST00000433094 GTF2E1P29083 439 aaPredicted RBP12.62□□□□□ -0.39
LINC00494-203ENST00000433094 PCDHB15Q9Y5E8 787 aa12.62□□□□□ -0.39
LINC00494-203ENST00000433094 FANCD2Q9BXW9 1451 aa12.62□□□□□ -0.39
LINC00494-203ENST00000433094 CSPP1Q1MSJ5 1256 aa12.61□□□□□ -0.39
LINC00494-203ENST00000433094 E9PSI1 815 aa12.61□□□□□ -0.39
LINC00494-203ENST00000433094 APAF1O14727 1248 aa12.61□□□□□ -0.39
LINC00494-203ENST00000433094 DDIT3P35638 169 aa12.61□□□□□ -0.39
LINC00494-203ENST00000433094 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
LINC00494-203ENST00000433094 ERCC6Q03468 1493 aa12.61□□□□□ -0.39
LINC00494-203ENST00000433094 HSP90AB1P08238 724 aaKnown RBP12.6□□□□□ -0.39
LINC00494-203ENST00000433094 DDX49Q9Y6V7 483 aaKnown RBP12.6□□□□□ -0.39
LINC00494-203ENST00000433094 GOLGA6L22H0YM25 854 aa12.6□□□□□ -0.39
LINC00494-203ENST00000433094 RAB3GAP1Q15042 981 aa12.6□□□□□ -0.39
LINC00494-203ENST00000433094 PPP4R3BQ5MIZ7 849 aa12.6□□□□□ -0.39
LINC00494-203ENST00000433094 STAC3Q96MF2 364 aa12.6□□□□□ -0.39
LINC00494-203ENST00000433094 ZMYM3Q14202 1370 aa12.6□□□□□ -0.39
LINC00494-203ENST00000433094 PPP2R1AP30153 589 aa12.6□□□□□ -0.39
LINC00494-203ENST00000433094 SASS6Q6UVJ0 657 aa12.59□□□□□ -0.39
LINC00494-203ENST00000433094 RWDD1Q9H446 243 aaPredicted RBP12.59□□□□□ -0.39
LINC00494-203ENST00000433094 SMC5Q8IY18 1101 aa12.59□□□□□ -0.39
LINC00494-203ENST00000433094 NAP1L2Q9ULW6 460 aaPredicted RBP12.58□□□□□ -0.39
LINC00494-203ENST00000433094 PDS5BQ9NTI5 1447 aa12.58□□□□□ -0.4
LINC00494-203ENST00000433094 FOXD4L1Q9NU39 408 aa12.58□□□□□ -0.4
LINC00494-203ENST00000433094 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.58□□□□□ -0.4
LINC00494-203ENST00000433094 ZKSCAN5Q9Y2L8 839 aa12.57□□□□□ -0.4
LINC00494-203ENST00000433094 GAPVD1Q14C86 1478 aa12.57□□□□□ -0.4
LINC00494-203ENST00000433094 KIF20AO95235 890 aa12.57□□□□□ -0.4
LINC00494-203ENST00000433094 NBPF1Q3BBV0 1214 aa12.57□□□□□ -0.4
LINC00494-203ENST00000433094 CBX1P83916 185 aa12.56□□□□□ -0.4
LINC00494-203ENST00000433094 KLHL40Q2TBA0 621 aa12.56□□□□□ -0.4
LINC00494-203ENST00000433094 GTPBP4Q9BZE4 634 aaKnown RBP12.56□□□□□ -0.4
LINC00494-203ENST00000433094 KNSTRNQ9Y448 316 aa12.56□□□□□ -0.4
LINC00494-203ENST00000433094 RTEL1-TNFRSF6BF6WH68 1400 aa12.56□□□□□ -0.4
LINC00494-203ENST00000433094 CTTNBP2Q8WZ74 1663 aa12.56□□□□□ -0.4
LINC00494-203ENST00000433094 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
LINC00494-203ENST00000433094 SNX21Q969T3 373 aa12.56□□□□□ -0.4
LINC00494-203ENST00000433094 CHMP4BQ9H444 224 aaKnown RBP12.56□□□□□ -0.4
LINC00494-203ENST00000433094 DMRT2Q9Y5R5 561 aa12.56□□□□□ -0.4
LINC00494-203ENST00000433094 NCOA3Q9Y6Q9 1424 aa12.55□□□□□ -0.4
LINC00494-203ENST00000433094 ANKRD30AQ9BXX3 1397 aa12.55□□□□□ -0.4
LINC00494-203ENST00000433094 DISP3Q9P2K9 1392 aa12.55□□□□□ -0.4
LINC00494-203ENST00000433094 RAD54L2Q9Y4B4 1467 aa12.54□□□□□ -0.4
LINC00494-203ENST00000433094 PDLIM2Q96JY6 352 aa12.54□□□□□ -0.4
LINC00494-203ENST00000433094 IBTKQ9P2D0 1353 aaPredicted RBP12.54□□□□□ -0.4
LINC00494-203ENST00000433094 CAMSAP2Q08AD1 1489 aa12.54□□□□□ -0.4
LINC00494-203ENST00000433094 MCM5P33992 734 aa12.54□□□□□ -0.4
LINC00494-203ENST00000433094 TMF1P82094 1093 aa12.54□□□□□ -0.4
LINC00494-203ENST00000433094 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
LINC00494-203ENST00000433094 LAMC3Q9Y6N6 1575 aa12.54□□□□□ -0.4
LINC00494-203ENST00000433094 KIF21AQ7Z4S6 1674 aa12.54□□□□□ -0.4
LINC00494-203ENST00000433094 ARHGEF12Q9NZN5 1544 aa12.54□□□□□ -0.4
LINC00494-203ENST00000433094 RLBP1P12271 317 aa12.53□□□□□ -0.4
LINC00494-203ENST00000433094 SSFA2P28290 1259 aa12.53□□□□□ -0.4
LINC00494-203ENST00000433094 TESK2Q96S53 571 aa12.53□□□□□ -0.4
LINC00494-203ENST00000433094 SAMD9Q5K651 1589 aa12.53□□□□□ -0.4
LINC00494-203ENST00000433094 LETM1O95202 739 aaPredicted RBP12.53□□□□□ -0.4
LINC00494-203ENST00000433094 ZNF445P59923 1031 aa12.53□□□□□ -0.4
LINC00494-203ENST00000433094 RBSNQ9H1K0 784 aa12.53□□□□□ -0.4
LINC00494-203ENST00000433094 KIAA0586Q9BVV6 1533 aa12.53□□□□□ -0.4
LINC00494-203ENST00000433094 CAVIN1Q6NZI2 390 aaKnown RBP12.53□□□□□ -0.4
LINC00494-203ENST00000433094 TNNQ9UQP3 1299 aa12.53□□□□□ -0.4
LINC00494-203ENST00000433094 NUP155O75694 1391 aa12.52□□□□□ -0.4
LINC00494-203ENST00000433094 DNTTIP2Q5QJE6 756 aaKnown RBP12.52□□□□□ -0.4
LINC00494-203ENST00000433094 EPRSP07814 1512 aaKnown RBP12.52□□□□□ -0.41
LINC00494-203ENST00000433094 ZBTB7CA1YPR0 619 aa12.52□□□□□ -0.41
LINC00494-203ENST00000433094 RBM25P49756 843 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms