RNA–Protein interactions for RNA: ENST00000433041.1

BRD3-204, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-204ENST00000433041 SOCS7O14512 581 aa24.24■■□□□ 1.47
BRD3-204ENST00000433041 SLC26A8Q96RN1 970 aa24.22■■□□□ 1.47
BRD3-204ENST00000433041 NKTRP30414 1462 aaKnown RBP24.21■■□□□ 1.47
BRD3-204ENST00000433041 RIMS2Q9UQ26 1411 aa24.21■■□□□ 1.47
BRD3-204ENST00000433041 TMEM94Q12767 1356 aa24.21■■□□□ 1.47
BRD3-204ENST00000433041 CHD2O14647 1828 aaKnown RBP24.2■■□□□ 1.46
BRD3-204ENST00000433041 SENP3Q9H4L4 574 aaPredicted RBP24.19■■□□□ 1.46
BRD3-204ENST00000433041 PLEKHG1Q9ULL1 1385 aa24.18■■□□□ 1.46
BRD3-204ENST00000433041 ITGAEP38570 1179 aa24.18■■□□□ 1.46
BRD3-204ENST00000433041 KCNA6P17658 529 aa24.17■■□□□ 1.46
BRD3-204ENST00000433041 SPHKAPQ2M3C7 1700 aa24.17■■□□□ 1.46
BRD3-204ENST00000433041 ROBO1Q9Y6N7 1651 aa24.15■■□□□ 1.46
BRD3-204ENST00000433041 NUP155O75694 1391 aa24.15■■□□□ 1.46
BRD3-204ENST00000433041 RBM33Q96EV2 1170 aaKnown RBP24.14■■□□□ 1.45
BRD3-204ENST00000433041 RRBP1Q9P2E9 1410 aaKnown RBP24.12■■□□□ 1.45
BRD3-204ENST00000433041 ADAMTS13Q76LX8 1427 aa24.11■■□□□ 1.45
BRD3-204ENST00000433041 DIP2AQ14689 1571 aa24.11■■□□□ 1.45
BRD3-204ENST00000433041 FAM135BQ49AJ0 1406 aa24.1■■□□□ 1.45
BRD3-204ENST00000433041 PROSER2Q86WR7 435 aaPredicted RBP24.09■■□□□ 1.45
BRD3-204ENST00000433041 PPP1R15AO75807 674 aaPredicted RBP24.08■■□□□ 1.45
BRD3-204ENST00000433041 BCANQ96GW7 911 aa24.08■■□□□ 1.45
BRD3-204ENST00000433041 NRXN3Q9Y4C0 1643 aa24.08■■□□□ 1.45
BRD3-204ENST00000433041 CHGAP10645 457 aaKnown RBP24.07■■□□□ 1.44
BRD3-204ENST00000433041 NUTM2DQ5VT03 806 aaPredicted RBP24.06■■□□□ 1.44
BRD3-204ENST00000433041 CLTCL1P53675 1640 aa24.06■■□□□ 1.44
BRD3-204ENST00000433041 NAIPQ13075 1403 aa24.03■■□□□ 1.44
BRD3-204ENST00000433041 TRPM2O94759 1503 aa24.02■■□□□ 1.44
BRD3-204ENST00000433041 MSH6P52701 1360 aa24.02■■□□□ 1.44
BRD3-204ENST00000433041 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.01■■□□□ 1.43
BRD3-204ENST00000433041 TBX22Q9Y458 520 aa24.01■■□□□ 1.43
BRD3-204ENST00000433041 XRN1Q8IZH2 1706 aaKnown RBP24.01■■□□□ 1.43
BRD3-204ENST00000433041 SETBP1Q9Y6X0 1596 aa24■■□□□ 1.43
BRD3-204ENST00000433041 PHLPP1O60346 1717 aa23.99■■□□□ 1.43
BRD3-204ENST00000433041 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.99■■□□□ 1.43
BRD3-204ENST00000433041 HDGFP51858 240 aaKnown RBP23.99■■□□□ 1.43
BRD3-204ENST00000433041 PTPRUQ92729 1446 aa23.99■■□□□ 1.43
BRD3-204ENST00000433041 PHF23Q9BUL5 403 aaPredicted RBP23.98■■□□□ 1.43
BRD3-204ENST00000433041 NEXMIFQ5QGS0 1516 aa23.97■■□□□ 1.43
BRD3-204ENST00000433041 PIK3R4Q99570 1358 aa23.97■■□□□ 1.43
BRD3-204ENST00000433041 COL16A1Q07092 1604 aaPredicted RBP23.95■■□□□ 1.43
BRD3-204ENST00000433041 KIF1BO60333 1816 aa23.95■■□□□ 1.42
BRD3-204ENST00000433041 NCOA3Q9Y6Q9 1424 aa23.94■■□□□ 1.42
BRD3-204ENST00000433041 HFM1A2PYH4 1435 aa23.93■■□□□ 1.42
BRD3-204ENST00000433041 RGS17Q9UGC6 210 aaPredicted RBP23.91■■□□□ 1.42
BRD3-204ENST00000433041 SLAIN2Q9P270 581 aa23.9■■□□□ 1.42
BRD3-204ENST00000433041 SETD1AO15047 1707 aaKnown RBP23.9■■□□□ 1.42
BRD3-204ENST00000433041 AHDC1Q5TGY3 1603 aaPredicted RBP23.88■■□□□ 1.41
BRD3-204ENST00000433041 AMOTL2Q9Y2J4 779 aa23.86■■□□□ 1.41
BRD3-204ENST00000433041 METP08581 1390 aa23.86■■□□□ 1.41
BRD3-204ENST00000433041 NALCNQ8IZF0 1738 aa23.85■■□□□ 1.41
BRD3-204ENST00000433041 ZNF326Q5BKZ1 582 aaKnown RBP23.85■■□□□ 1.41
BRD3-204ENST00000433041 C14orf37Q86TY3 774 aa23.83■■□□□ 1.41
BRD3-204ENST00000433041 PPLO60437 1756 aa23.83■■□□□ 1.4
BRD3-204ENST00000433041 DCCP43146 1447 aa23.82■■□□□ 1.4
BRD3-204ENST00000433041 SHPRHQ149N8 1683 aa23.81■■□□□ 1.4
BRD3-204ENST00000433041 C19orf44Q9H6X5 657 aa23.81■■□□□ 1.4
BRD3-204ENST00000433041 JCADQ9P266 1359 aa23.8■■□□□ 1.4
BRD3-204ENST00000433041 LRP6O75581 1613 aa23.8■■□□□ 1.4
BRD3-204ENST00000433041 NHSL1Q5SYE7 1610 aa23.78■■□□□ 1.4
BRD3-204ENST00000433041 CADPS2Q86UW7 1296 aa23.78■■□□□ 1.4
BRD3-204ENST00000433041 ASXL1Q8IXJ9 1541 aa23.78■■□□□ 1.4
BRD3-204ENST00000433041 MST1RQ04912 1400 aa23.77■■□□□ 1.4
BRD3-204ENST00000433041 TRIM52Q96A61 297 aa23.77■■□□□ 1.4
BRD3-204ENST00000433041 ADGRL3Q9HAR2 1447 aa23.76■■□□□ 1.39
BRD3-204ENST00000433041 ATF3P18847 181 aa23.76■■□□□ 1.39
BRD3-204ENST00000433041 POTEAQ6S8J7 498 aa23.75■■□□□ 1.39
BRD3-204ENST00000433041 BRINP3Q76B58 766 aa23.73■■□□□ 1.39
BRD3-204ENST00000433041 SLC4A1APQ9BWU0 796 aaKnown RBP23.73■■□□□ 1.39
BRD3-204ENST00000433041 IFT172Q9UG01 1749 aa23.73■■□□□ 1.39
BRD3-204ENST00000433041 PTCH1Q13635 1447 aa23.71■■□□□ 1.39
BRD3-204ENST00000433041 PRAG1Q86YV5 1406 aa23.7■■□□□ 1.38
BRD3-204ENST00000433041 FOXD1Q16676 465 aa23.69■■□□□ 1.38
BRD3-204ENST00000433041 ROBO2Q9HCK4 1378 aa23.67■■□□□ 1.38
BRD3-204ENST00000433041 SPATA31A6Q5VVP1 1343 aa23.65■■□□□ 1.38
BRD3-204ENST00000433041 LAMC1P11047 1609 aa23.65■■□□□ 1.38
BRD3-204ENST00000433041 SPATA31E1Q6ZUB1 1445 aa23.64■■□□□ 1.37
BRD3-204ENST00000433041 SETD5Q9C0A6 1442 aa23.64■■□□□ 1.37
BRD3-204ENST00000433041 RPGRIP1LQ68CZ1 1315 aa23.63■■□□□ 1.37
BRD3-204ENST00000433041 VGFO15240 615 aaPredicted RBP23.63■■□□□ 1.37
BRD3-204ENST00000433041 C1orf167Q5SNV9 1468 aa23.62■■□□□ 1.37
BRD3-204ENST00000433041 CCDC144AA2RUR9 1427 aa23.61■■□□□ 1.37
BRD3-204ENST00000433041 DDX17Q92841 729 aaKnown RBP23.59■■□□□ 1.37
BRD3-204ENST00000433041 CDC42BPGQ6DT37 1551 aa23.58■■□□□ 1.37
BRD3-204ENST00000433041 KNDC1Q76NI1 1749 aa23.58■■□□□ 1.37
BRD3-204ENST00000433041 ADGRF5Q8IZF2 1346 aa23.57■■□□□ 1.36
BRD3-204ENST00000433041 MPHOSPH9Q99550 1183 aa23.56■■□□□ 1.36
BRD3-204ENST00000433041 PNPLA6Q8IY17 1366 aa23.55■■□□□ 1.36
BRD3-204ENST00000433041 MEX3CQ5U5Q3 659 aaKnown RBP23.55■■□□□ 1.36
BRD3-204ENST00000433041 PIK3C2GO75747 1445 aa23.53■■□□□ 1.36
BRD3-204ENST00000433041 TECPR2O15040 1411 aa23.52■■□□□ 1.36
BRD3-204ENST00000433041 NUTM2BA6NNL0 878 aaPredicted RBP23.51■■□□□ 1.35
BRD3-204ENST00000433041 NUTM2EB1AL46 878 aaPredicted RBP23.51■■□□□ 1.35
BRD3-204ENST00000433041 NUTM2AQ8IVF1 878 aaPredicted RBP23.51■■□□□ 1.35
BRD3-204ENST00000433041 RGL3Q3MIN7 710 aa23.5■■□□□ 1.35
BRD3-204ENST00000433041 ORAI2Q96SN7 254 aa23.5■■□□□ 1.35
BRD3-204ENST00000433041 ANKRD30BQ9BXX2 1392 aa23.5■■□□□ 1.35
BRD3-204ENST00000433041 LRRC59Q96AG4 307 aaKnown RBP23.48■■□□□ 1.35
BRD3-204ENST00000433041 COL22A1Q8NFW1 1626 aaPredicted RBP23.48■■□□□ 1.35
BRD3-204ENST00000433041 ZNF772Q68DY9 489 aaPredicted RBP23.47■■□□□ 1.35
BRD3-204ENST00000433041 LRPPRCP42704 1394 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms