RNA–Protein interactions for RNA: ENST00000432606.1

RGPD5-206, Transcript of RANBP2-like and GRIP domain containing 5, human

TSL 4

Gene RGPD5, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RGPD5-206	ENST00000432606	TMEM2	Q9UHN6	1383 aa		31.74	■■■□□ 2.67
RGPD5-206	ENST00000432606	STRCP1	A6NGW2	1772 aa		31.73	■■■□□ 2.67
RGPD5-206	ENST00000432606	SPHKAP	Q2M3C7	1700 aa		31.7	■■■□□ 2.67
RGPD5-206	ENST00000432606	MYO5B	Q9ULV0	1848 aa		31.69	■■■□□ 2.66
RGPD5-206	ENST00000432606	LTK	P29376	864 aa		31.68	■■■□□ 2.66
RGPD5-206	ENST00000432606	ACIN1	Q9UKV3	1341 aa	Known RBP	31.67	■■■□□ 2.66
RGPD5-206	ENST00000432606	CHGA	P10645	457 aa	Known RBP	31.66	■■■□□ 2.66
RGPD5-206	ENST00000432606	HDGF	P51858	240 aa	Known RBP	31.66	■■■□□ 2.66
RGPD5-206	ENST00000432606	TMEM131L	A2VDJ0	1609 aa		31.65	■■■□□ 2.66
RGPD5-206	ENST00000432606	SENP3	Q9H4L4	574 aa	Predicted RBP	31.65	■■■□□ 2.66
RGPD5-206	ENST00000432606	RGS17	Q9UGC6	210 aa	Predicted RBP	31.65	■■■□□ 2.66
RGPD5-206	ENST00000432606	SLC4A1AP	Q9BWU0	796 aa	Known RBP	31.63	■■■□□ 2.65
RGPD5-206	ENST00000432606	SETD5	Q9C0A6	1442 aa		31.59	■■■□□ 2.65
RGPD5-206	ENST00000432606	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	31.56	■■■□□ 2.64
RGPD5-206	ENST00000432606	RIMS2	Q9UQ26	1411 aa		31.56	■■■□□ 2.64
RGPD5-206	ENST00000432606	TRPM2	O94759	1503 aa		31.55	■■■□□ 2.64
RGPD5-206	ENST00000432606	PPP1R15A	O75807	674 aa	Predicted RBP	31.55	■■■□□ 2.64
RGPD5-206	ENST00000432606	ZFYVE9	O95405	1425 aa		31.54	■■■□□ 2.64
RGPD5-206	ENST00000432606	BCAN	Q96GW7	911 aa		31.53	■■■□□ 2.64
RGPD5-206	ENST00000432606	KIF1B	O60333	1816 aa		31.52	■■■□□ 2.64
RGPD5-206	ENST00000432606	FAM135B	Q49AJ0	1406 aa		31.52	■■■□□ 2.64
RGPD5-206	ENST00000432606	CLTCL1	P53675	1640 aa		31.49	■■■□□ 2.63
RGPD5-206	ENST00000432606	MPHOSPH9	Q99550	1183 aa		31.48	■■■□□ 2.63
RGPD5-206	ENST00000432606	XIRP1	Q702N8	1843 aa	Known RBP	31.47	■■■□□ 2.63
RGPD5-206	ENST00000432606	PLEKHG1	Q9ULL1	1385 aa		31.47	■■■□□ 2.63
RGPD5-206	ENST00000432606	ZNF326	Q5BKZ1	582 aa	Known RBP	31.46	■■■□□ 2.63
RGPD5-206	ENST00000432606	RAB3GAP2	Q9H2M9	1393 aa		31.44	■■■□□ 2.62
RGPD5-206	ENST00000432606	SLC26A8	Q96RN1	970 aa		31.44	■■■□□ 2.62
RGPD5-206	ENST00000432606	POTEA	Q6S8J7	498 aa		31.42	■■■□□ 2.62
RGPD5-206	ENST00000432606	NUTM2D	Q5VT03	806 aa	Predicted RBP	31.4	■■■□□ 2.62
RGPD5-206	ENST00000432606	FOXD1	Q16676	465 aa		31.39	■■■□□ 2.62
RGPD5-206	ENST00000432606	TMEM94	Q12767	1356 aa		31.36	■■■□□ 2.61
RGPD5-206	ENST00000432606	KCNA6	P17658	529 aa		31.36	■■■□□ 2.61
RGPD5-206	ENST00000432606	HRC	P23327	699 aa		31.35	■■■□□ 2.61
RGPD5-206	ENST00000432606	TBX22	Q9Y458	520 aa		31.35	■■■□□ 2.61
RGPD5-206	ENST00000432606	CCDC144A	A2RUR9	1427 aa		31.34	■■■□□ 2.61
RGPD5-206	ENST00000432606	DIP2A	Q14689	1571 aa		31.34	■■■□□ 2.61
RGPD5-206	ENST00000432606	CHD2	O14647	1828 aa	Known RBP	31.31	■■■□□ 2.6
RGPD5-206	ENST00000432606	NEXMIF	Q5QGS0	1516 aa		31.29	■■■□□ 2.6
RGPD5-206	ENST00000432606	PROSER2	Q86WR7	435 aa	Predicted RBP	31.29	■■■□□ 2.6
RGPD5-206	ENST00000432606	RPGRIP1L	Q68CZ1	1315 aa		31.28	■■■□□ 2.6
RGPD5-206	ENST00000432606	NWD1	Q149M9	1564 aa		31.28	■■■□□ 2.6
RGPD5-206	ENST00000432606	ADAMTS13	Q76LX8	1427 aa		31.28	■■■□□ 2.6
RGPD5-206	ENST00000432606	ROBO1	Q9Y6N7	1651 aa		31.27	■■■□□ 2.6
RGPD5-206	ENST00000432606	NKTR	P30414	1462 aa	Known RBP	31.27	■■■□□ 2.6
RGPD5-206	ENST00000432606	TRIM26	Q12899	539 aa	Predicted RBP	31.26	■■■□□ 2.59
RGPD5-206	ENST00000432606	PIK3R4	Q99570	1358 aa		31.26	■■■□□ 2.59
RGPD5-206	ENST00000432606	VGF	O15240	615 aa	Predicted RBP	31.25	■■■□□ 2.59
RGPD5-206	ENST00000432606	SETBP1	Q9Y6X0	1596 aa		31.25	■■■□□ 2.59
RGPD5-206	ENST00000432606	PPL	O60437	1756 aa		31.21	■■■□□ 2.59
RGPD5-206	ENST00000432606	NRXN3	Q9Y4C0	1643 aa		31.2	■■■□□ 2.59
RGPD5-206	ENST00000432606	RBM33	Q96EV2	1170 aa	Known RBP	31.18	■■■□□ 2.58
RGPD5-206	ENST00000432606	SLAIN2	Q9P270	581 aa		31.18	■■■□□ 2.58
RGPD5-206	ENST00000432606	MSH6	P52701	1360 aa		31.17	■■■□□ 2.58
RGPD5-206	ENST00000432606	JCAD	Q9P266	1359 aa		31.17	■■■□□ 2.58
RGPD5-206	ENST00000432606	RGL3	Q3MIN7	710 aa		31.15	■■■□□ 2.58
RGPD5-206	ENST00000432606	SPATA31E1	Q6ZUB1	1445 aa		31.15	■■■□□ 2.58
RGPD5-206	ENST00000432606	AMOTL2	Q9Y2J4	779 aa		31.12	■■■□□ 2.57
RGPD5-206	ENST00000432606	ANKRD30B	Q9BXX2	1392 aa		31.1	■■■□□ 2.57
RGPD5-206	ENST00000432606	PHLPP1	O60346	1717 aa		31.09	■■■□□ 2.57
RGPD5-206	ENST00000432606	IFT172	Q9UG01	1749 aa		31.09	■■■□□ 2.57
RGPD5-206	ENST00000432606	NCOA3	Q9Y6Q9	1424 aa		31.08	■■■□□ 2.57
RGPD5-206	ENST00000432606	PTPRU	Q92729	1446 aa		31.07	■■■□□ 2.56
RGPD5-206	ENST00000432606	MET	P08581	1390 aa		31.06	■■■□□ 2.56
RGPD5-206	ENST00000432606	SETD1A	O15047	1707 aa	Known RBP	31.05	■■■□□ 2.56
RGPD5-206	ENST00000432606	XRN1	Q8IZH2	1706 aa	Known RBP	31.05	■■■□□ 2.56
RGPD5-206	ENST00000432606	C14orf37	Q86TY3	774 aa		31.05	■■■□□ 2.56
RGPD5-206	ENST00000432606	SPATA31A6	Q5VVP1	1343 aa		31.03	■■■□□ 2.56
RGPD5-206	ENST00000432606	COL16A1	Q07092	1604 aa	Predicted RBP	31	■■■□□ 2.55
RGPD5-206	ENST00000432606	ZNF772	Q68DY9	489 aa	Predicted RBP	31	■■■□□ 2.55
RGPD5-206	ENST00000432606	ADGRF5	Q8IZF2	1346 aa		30.99	■■■□□ 2.55
RGPD5-206	ENST00000432606	UPF1	Q92900	1129 aa	Known RBP eCLIP	30.99	■■■□□ 2.55
RGPD5-206	ENST00000432606	C19orf44	Q9H6X5	657 aa		30.97	■■■□□ 2.55
RGPD5-206	ENST00000432606	LRP6	O75581	1613 aa		30.95	■■■□□ 2.54
RGPD5-206	ENST00000432606	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	30.93	■■■□□ 2.54
RGPD5-206	ENST00000432606	PIK3C2G	O75747	1445 aa		30.92	■■■□□ 2.54
RGPD5-206	ENST00000432606	ATF3	P18847	181 aa		30.92	■■■□□ 2.54
RGPD5-206	ENST00000432606	MEX3C	Q5U5Q3	659 aa	Known RBP	30.92	■■■□□ 2.54
RGPD5-206	ENST00000432606	CADPS2	Q86UW7	1296 aa		30.92	■■■□□ 2.54
RGPD5-206	ENST00000432606	MYOM2	P54296	1465 aa		30.92	■■■□□ 2.54
RGPD5-206	ENST00000432606	PTCH1	Q13635	1447 aa		30.9	■■■□□ 2.54
RGPD5-206	ENST00000432606	AHDC1	Q5TGY3	1603 aa	Predicted RBP	30.87	■■■□□ 2.53
RGPD5-206	ENST00000432606	STAC3	Q96MF2	364 aa		30.87	■■■□□ 2.53
RGPD5-206	ENST00000432606	DCC	P43146	1447 aa		30.86	■■■□□ 2.53
RGPD5-206	ENST00000432606	PRAG1	Q86YV5	1406 aa		30.86	■■■□□ 2.53
RGPD5-206	ENST00000432606	NRXN1	Q9ULB1	1477 aa		30.86	■■■□□ 2.53
RGPD5-206	ENST00000432606	LAMC1	P11047	1609 aa		30.86	■■■□□ 2.53
RGPD5-206	ENST00000432606	RXRB	P28702	533 aa		30.85	■■■□□ 2.53
RGPD5-206	ENST00000432606	SHPRH	Q149N8	1683 aa		30.84	■■■□□ 2.53
RGPD5-206	ENST00000432606	DCAF11	Q8TEB1	546 aa		30.83	■■■□□ 2.53
RGPD5-206	ENST00000432606	PCGF6	Q9BYE7	350 aa		30.83	■■■□□ 2.53
RGPD5-206	ENST00000432606	C14orf93	Q9H972	538 aa	Known RBP	30.83	■■■□□ 2.53
RGPD5-206	ENST00000432606	ADGRL3	Q9HAR2	1447 aa		30.82	■■■□□ 2.52
RGPD5-206	ENST00000432606	ROBO2	Q9HCK4	1378 aa		30.81	■■■□□ 2.52
RGPD5-206	ENST00000432606	CDK12	Q9NYV4	1490 aa	Predicted RBP	30.81	■■■□□ 2.52
RGPD5-206	ENST00000432606	NALCN	Q8IZF0	1738 aa		30.8	■■■□□ 2.52
RGPD5-206	ENST00000432606	LRPPRC	P42704	1394 aa	Known RBP	30.79	■■■□□ 2.52
RGPD5-206	ENST00000432606	KDM2A	Q9Y2K7	1162 aa		30.79	■■■□□ 2.52
RGPD5-206	ENST00000432606	TMEM132E	Q6IEE7	984 aa		30.78	■■■□□ 2.52
RGPD5-206	ENST00000432606	STK26	Q9P289	416 aa		30.78	■■■□□ 2.52

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms