RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 RBM33Q96EV2 1170 aaKnown RBP23.23■■□□□ 1.31
CSNK1E-208ENST00000431611 CHGAP10645 457 aaKnown RBP23.22■■□□□ 1.31
CSNK1E-208ENST00000431611 ITGAEP38570 1179 aa23.22■■□□□ 1.31
CSNK1E-208ENST00000431611 ZFYVE9O95405 1425 aa23.22■■□□□ 1.31
CSNK1E-208ENST00000431611 FAM135BQ49AJ0 1406 aa23.22■■□□□ 1.31
CSNK1E-208ENST00000431611 UNC13BO14795 1591 aa23.22■■□□□ 1.31
CSNK1E-208ENST00000431611 XIRP1Q702N8 1843 aaKnown RBP23.22■■□□□ 1.31
CSNK1E-208ENST00000431611 PLEKHG1Q9ULL1 1385 aa23.21■■□□□ 1.31
CSNK1E-208ENST00000431611 RIMS2Q9UQ26 1411 aa23.21■■□□□ 1.31
CSNK1E-208ENST00000431611 NKTRP30414 1462 aaKnown RBP23.19■■□□□ 1.3
CSNK1E-208ENST00000431611 PPARGC1BQ86YN6 1023 aaKnown RBP23.18■■□□□ 1.3
CSNK1E-208ENST00000431611 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.18■■□□□ 1.3
CSNK1E-208ENST00000431611 NUP155O75694 1391 aa23.17■■□□□ 1.3
CSNK1E-208ENST00000431611 GCC2Q8IWJ2 1684 aa23.17■■□□□ 1.3
CSNK1E-208ENST00000431611 TMEM131LA2VDJ0 1609 aa23.17■■□□□ 1.3
CSNK1E-208ENST00000431611 NWD1Q149M9 1564 aa23.16■■□□□ 1.3
CSNK1E-208ENST00000431611 TBX22Q9Y458 520 aa23.16■■□□□ 1.3
CSNK1E-208ENST00000431611 MSH6P52701 1360 aa23.14■■□□□ 1.3
CSNK1E-208ENST00000431611 E9PCH4 1651 aa23.13■■□□□ 1.29
CSNK1E-208ENST00000431611 IQGAP3Q86VI3 1631 aa23.12■■□□□ 1.29
CSNK1E-208ENST00000431611 NUTM2DQ5VT03 806 aaPredicted RBP23.12■■□□□ 1.29
CSNK1E-208ENST00000431611 SLAIN2Q9P270 581 aa23.1■■□□□ 1.29
CSNK1E-208ENST00000431611 MYO5BQ9ULV0 1848 aa23.1■■□□□ 1.29
CSNK1E-208ENST00000431611 ROBO1Q9Y6N7 1651 aa23.07■■□□□ 1.28
CSNK1E-208ENST00000431611 ADAMTS13Q76LX8 1427 aa23.07■■□□□ 1.28
CSNK1E-208ENST00000431611 RGS17Q9UGC6 210 aaPredicted RBP23.06■■□□□ 1.28
CSNK1E-208ENST00000431611 C14orf37Q86TY3 774 aa23.05■■□□□ 1.28
CSNK1E-208ENST00000431611 NCOA3Q9Y6Q9 1424 aa23.05■■□□□ 1.28
CSNK1E-208ENST00000431611 PIK3R4Q99570 1358 aa23.04■■□□□ 1.28
CSNK1E-208ENST00000431611 CHD2O14647 1828 aaKnown RBP23.04■■□□□ 1.28
CSNK1E-208ENST00000431611 DIP2AQ14689 1571 aa23.01■■□□□ 1.27
CSNK1E-208ENST00000431611 CADPS2Q86UW7 1296 aa22.99■■□□□ 1.27
CSNK1E-208ENST00000431611 C19orf44Q9H6X5 657 aa22.99■■□□□ 1.27
CSNK1E-208ENST00000431611 AMOTL2Q9Y2J4 779 aa22.99■■□□□ 1.27
CSNK1E-208ENST00000431611 ZNF326Q5BKZ1 582 aaKnown RBP22.98■■□□□ 1.27
CSNK1E-208ENST00000431611 ATF3P18847 181 aa22.97■■□□□ 1.27
CSNK1E-208ENST00000431611 TRPM2O94759 1503 aa22.97■■□□□ 1.27
CSNK1E-208ENST00000431611 JCADQ9P266 1359 aa22.96■■□□□ 1.27
CSNK1E-208ENST00000431611 RRBP1Q9P2E9 1410 aaKnown RBP22.96■■□□□ 1.27
CSNK1E-208ENST00000431611 PTPRUQ92729 1446 aa22.95■■□□□ 1.26
CSNK1E-208ENST00000431611 POTEAQ6S8J7 498 aa22.93■■□□□ 1.26
CSNK1E-208ENST00000431611 NAIPQ13075 1403 aa22.92■■□□□ 1.26
CSNK1E-208ENST00000431611 PHLPP1O60346 1717 aa22.92■■□□□ 1.26
CSNK1E-208ENST00000431611 SPHKAPQ2M3C7 1700 aa22.91■■□□□ 1.26
CSNK1E-208ENST00000431611 SETBP1Q9Y6X0 1596 aa22.89■■□□□ 1.26
CSNK1E-208ENST00000431611 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.89■■□□□ 1.26
CSNK1E-208ENST00000431611 METP08581 1390 aa22.88■■□□□ 1.25
CSNK1E-208ENST00000431611 TRIM52Q96A61 297 aa22.87■■□□□ 1.25
CSNK1E-208ENST00000431611 COL16A1Q07092 1604 aaPredicted RBP22.86■■□□□ 1.25
CSNK1E-208ENST00000431611 NRXN3Q9Y4C0 1643 aa22.86■■□□□ 1.25
CSNK1E-208ENST00000431611 SPATA31A6Q5VVP1 1343 aa22.85■■□□□ 1.25
CSNK1E-208ENST00000431611 BRINP3Q76B58 766 aa22.85■■□□□ 1.25
CSNK1E-208ENST00000431611 CLTCL1P53675 1640 aa22.85■■□□□ 1.25
CSNK1E-208ENST00000431611 DCCP43146 1447 aa22.84■■□□□ 1.25
CSNK1E-208ENST00000431611 NEXMIFQ5QGS0 1516 aa22.82■■□□□ 1.24
CSNK1E-208ENST00000431611 AHDC1Q5TGY3 1603 aaPredicted RBP22.82■■□□□ 1.24
CSNK1E-208ENST00000431611 XRN1Q8IZH2 1706 aaKnown RBP22.82■■□□□ 1.24
CSNK1E-208ENST00000431611 HFM1A2PYH4 1435 aa22.82■■□□□ 1.24
CSNK1E-208ENST00000431611 MEX3CQ5U5Q3 659 aaKnown RBP22.81■■□□□ 1.24
CSNK1E-208ENST00000431611 SLC4A1APQ9BWU0 796 aaKnown RBP22.8■■□□□ 1.24
CSNK1E-208ENST00000431611 VGFO15240 615 aaPredicted RBP22.79■■□□□ 1.24
CSNK1E-208ENST00000431611 LRP6O75581 1613 aa22.79■■□□□ 1.24
CSNK1E-208ENST00000431611 MST1RQ04912 1400 aa22.78■■□□□ 1.24
CSNK1E-208ENST00000431611 ADGRL3Q9HAR2 1447 aa22.76■■□□□ 1.23
CSNK1E-208ENST00000431611 ASXL1Q8IXJ9 1541 aa22.76■■□□□ 1.23
CSNK1E-208ENST00000431611 ZNF772Q68DY9 489 aaPredicted RBP22.75■■□□□ 1.23
CSNK1E-208ENST00000431611 RPGRIP1LQ68CZ1 1315 aa22.75■■□□□ 1.23
CSNK1E-208ENST00000431611 KIF1BO60333 1816 aa22.73■■□□□ 1.23
CSNK1E-208ENST00000431611 NUTM2BA6NNL0 878 aaPredicted RBP22.73■■□□□ 1.23
CSNK1E-208ENST00000431611 NUTM2EB1AL46 878 aaPredicted RBP22.73■■□□□ 1.23
CSNK1E-208ENST00000431611 NUTM2AQ8IVF1 878 aaPredicted RBP22.73■■□□□ 1.23
CSNK1E-208ENST00000431611 SHPRHQ149N8 1683 aa22.72■■□□□ 1.23
CSNK1E-208ENST00000431611 LRRC59Q96AG4 307 aaKnown RBP22.72■■□□□ 1.23
CSNK1E-208ENST00000431611 SETD5Q9C0A6 1442 aa22.72■■□□□ 1.23
CSNK1E-208ENST00000431611 PTCH1Q13635 1447 aa22.69■■□□□ 1.22
CSNK1E-208ENST00000431611 ROBO2Q9HCK4 1378 aa22.68■■□□□ 1.22
CSNK1E-208ENST00000431611 FOXD1Q16676 465 aa22.68■■□□□ 1.22
CSNK1E-208ENST00000431611 DDX17Q92841 729 aaKnown RBP22.68■■□□□ 1.22
CSNK1E-208ENST00000431611 C1orf167Q5SNV9 1468 aa22.66■■□□□ 1.22
CSNK1E-208ENST00000431611 NALCNQ8IZF0 1738 aa22.65■■□□□ 1.22
CSNK1E-208ENST00000431611 NHSL1Q5SYE7 1610 aa22.64■■□□□ 1.22
CSNK1E-208ENST00000431611 PRAG1Q86YV5 1406 aa22.64■■□□□ 1.21
CSNK1E-208ENST00000431611 RXRBP28702 533 aa22.63■■□□□ 1.21
CSNK1E-208ENST00000431611 PNPLA6Q8IY17 1366 aa22.63■■□□□ 1.21
CSNK1E-208ENST00000431611 ORAI2Q96SN7 254 aa22.62■■□□□ 1.21
CSNK1E-208ENST00000431611 MPHOSPH9Q99550 1183 aa22.62■■□□□ 1.21
CSNK1E-208ENST00000431611 CCDC144AA2RUR9 1427 aa22.62■■□□□ 1.21
CSNK1E-208ENST00000431611 SETD1AO15047 1707 aaKnown RBP22.62■■□□□ 1.21
CSNK1E-208ENST00000431611 AFF2P51816 1311 aa22.61■■□□□ 1.21
CSNK1E-208ENST00000431611 RGL3Q3MIN7 710 aa22.61■■□□□ 1.21
CSNK1E-208ENST00000431611 ADGRF5Q8IZF2 1346 aa22.59■■□□□ 1.21
CSNK1E-208ENST00000431611 C8orf37Q96NL8 207 aa22.59■■□□□ 1.21
CSNK1E-208ENST00000431611 PPLO60437 1756 aa22.58■■□□□ 1.2
CSNK1E-208ENST00000431611 SOS2Q07890 1332 aaPredicted RBP22.57■■□□□ 1.2
CSNK1E-208ENST00000431611 SPATA31E1Q6ZUB1 1445 aa22.56■■□□□ 1.2
CSNK1E-208ENST00000431611 ANKRD30BQ9BXX2 1392 aa22.55■■□□□ 1.2
CSNK1E-208ENST00000431611 STK26Q9P289 416 aa22.55■■□□□ 1.2
CSNK1E-208ENST00000431611 ADAMTS2O95450 1211 aa22.54■■□□□ 1.2
CSNK1E-208ENST00000431611 UPF1Q92900 1129 aaKnown RBP eCLIP22.54■■□□□ 1.2
CSNK1E-208ENST00000431611 NGLY1Q96IV0 654 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms