RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 GCC2Q8IWJ2 1684 aa21.4■■□□□ 1.02
SEC13-211ENST00000431352 PPP1R15AO75807 674 aaPredicted RBP21.38■■□□□ 1.01
SEC13-211ENST00000431352 KCNA6P17658 529 aa21.38■■□□□ 1.01
SEC13-211ENST00000431352 MYO5BQ9ULV0 1848 aa21.38■■□□□ 1.01
SEC13-211ENST00000431352 CHGAP10645 457 aaKnown RBP21.37■■□□□ 1.01
SEC13-211ENST00000431352 PROSER2Q86WR7 435 aaPredicted RBP21.37■■□□□ 1.01
SEC13-211ENST00000431352 RIMS2Q9UQ26 1411 aa21.36■■□□□ 1.01
SEC13-211ENST00000431352 ROCK1Q13464 1354 aa21.36■■□□□ 1.01
SEC13-211ENST00000431352 E9PCH4 1651 aa21.35■■□□□ 1.01
SEC13-211ENST00000431352 ZFYVE9O95405 1425 aa21.35■■□□□ 1.01
SEC13-211ENST00000431352 NWD1Q149M9 1564 aa21.35■■□□□ 1.01
SEC13-211ENST00000431352 NKTRP30414 1462 aaKnown RBP21.34■■□□□ 1.01
SEC13-211ENST00000431352 TMEM131LA2VDJ0 1609 aa21.34■■□□□ 1.01
SEC13-211ENST00000431352 IQGAP3Q86VI3 1631 aa21.33■■□□□ 1
SEC13-211ENST00000431352 PLEKHG1Q9ULL1 1385 aa21.32■■□□□ 1
SEC13-211ENST00000431352 NUTM2DQ5VT03 806 aaPredicted RBP21.31■■□□□ 1
SEC13-211ENST00000431352 NUP155O75694 1391 aa21.31■■□□□ 1
SEC13-211ENST00000431352 FAM135BQ49AJ0 1406 aa21.29■■□□□ 1
SEC13-211ENST00000431352 ROBO1Q9Y6N7 1651 aa21.28■■□□□ 1
SEC13-211ENST00000431352 MSH6P52701 1360 aa21.28■■□□□ 1
SEC13-211ENST00000431352 HDGFP51858 240 aaKnown RBP21.28■■□□□ 1
SEC13-211ENST00000431352 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.25■□□□□ 0.99
SEC13-211ENST00000431352 CHD2O14647 1828 aaKnown RBP21.23■□□□□ 0.99
SEC13-211ENST00000431352 C14orf37Q86TY3 774 aa21.22■□□□□ 0.99
SEC13-211ENST00000431352 ADAMTS13Q76LX8 1427 aa21.21■□□□□ 0.99
SEC13-211ENST00000431352 TBX22Q9Y458 520 aa21.2■□□□□ 0.98
SEC13-211ENST00000431352 DIP2AQ14689 1571 aa21.19■□□□□ 0.98
SEC13-211ENST00000431352 SLAIN2Q9P270 581 aa21.18■□□□□ 0.98
SEC13-211ENST00000431352 SPHKAPQ2M3C7 1700 aa21.18■□□□□ 0.98
SEC13-211ENST00000431352 RGS17Q9UGC6 210 aaPredicted RBP21.17■□□□□ 0.98
SEC13-211ENST00000431352 PHLPP1O60346 1717 aa21.15■□□□□ 0.98
SEC13-211ENST00000431352 TRPM2O94759 1503 aa21.15■□□□□ 0.98
SEC13-211ENST00000431352 ZNF326Q5BKZ1 582 aaKnown RBP21.14■□□□□ 0.97
SEC13-211ENST00000431352 PTPRUQ92729 1446 aa21.12■□□□□ 0.97
SEC13-211ENST00000431352 RRBP1Q9P2E9 1410 aaKnown RBP21.12■□□□□ 0.97
SEC13-211ENST00000431352 PIK3R4Q99570 1358 aa21.11■□□□□ 0.97
SEC13-211ENST00000431352 AMOTL2Q9Y2J4 779 aa21.11■□□□□ 0.97
SEC13-211ENST00000431352 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.11■□□□□ 0.97
SEC13-211ENST00000431352 ATF3P18847 181 aa21.1■□□□□ 0.97
SEC13-211ENST00000431352 NRXN3Q9Y4C0 1643 aa21.1■□□□□ 0.97
SEC13-211ENST00000431352 NCOA3Q9Y6Q9 1424 aa21.1■□□□□ 0.97
SEC13-211ENST00000431352 CLTCL1P53675 1640 aa21.09■□□□□ 0.97
SEC13-211ENST00000431352 JCADQ9P266 1359 aa21.09■□□□□ 0.97
SEC13-211ENST00000431352 COL16A1Q07092 1604 aaPredicted RBP21.08■□□□□ 0.97
SEC13-211ENST00000431352 NAIPQ13075 1403 aa21.08■□□□□ 0.97
SEC13-211ENST00000431352 CADPS2Q86UW7 1296 aa21.08■□□□□ 0.97
SEC13-211ENST00000431352 SETBP1Q9Y6X0 1596 aa21.07■□□□□ 0.96
SEC13-211ENST00000431352 C19orf44Q9H6X5 657 aa21.07■□□□□ 0.96
SEC13-211ENST00000431352 POTEAQ6S8J7 498 aa21.06■□□□□ 0.96
SEC13-211ENST00000431352 XRN1Q8IZH2 1706 aaKnown RBP21.06■□□□□ 0.96
SEC13-211ENST00000431352 TRIM52Q96A61 297 aa21.04■□□□□ 0.96
SEC13-211ENST00000431352 NEXMIFQ5QGS0 1516 aa21.04■□□□□ 0.96
SEC13-211ENST00000431352 METP08581 1390 aa21.03■□□□□ 0.96
SEC13-211ENST00000431352 AHDC1Q5TGY3 1603 aaPredicted RBP21.02■□□□□ 0.96
SEC13-211ENST00000431352 LRP6O75581 1613 aa21■□□□□ 0.95
SEC13-211ENST00000431352 KIF1BO60333 1816 aa20.99■□□□□ 0.95
SEC13-211ENST00000431352 HFM1A2PYH4 1435 aa20.99■□□□□ 0.95
SEC13-211ENST00000431352 MEX3CQ5U5Q3 659 aaKnown RBP20.99■□□□□ 0.95
SEC13-211ENST00000431352 BRINP3Q76B58 766 aa20.99■□□□□ 0.95
SEC13-211ENST00000431352 DCCP43146 1447 aa20.98■□□□□ 0.95
SEC13-211ENST00000431352 ASXL1Q8IXJ9 1541 aa20.97■□□□□ 0.95
SEC13-211ENST00000431352 SLC4A1APQ9BWU0 796 aaKnown RBP20.96■□□□□ 0.95
SEC13-211ENST00000431352 SPATA31A6Q5VVP1 1343 aa20.96■□□□□ 0.95
SEC13-211ENST00000431352 MST1RQ04912 1400 aa20.95■□□□□ 0.95
SEC13-211ENST00000431352 SETD1AO15047 1707 aaKnown RBP20.95■□□□□ 0.94
SEC13-211ENST00000431352 SHPRHQ149N8 1683 aa20.95■□□□□ 0.94
SEC13-211ENST00000431352 ADGRL3Q9HAR2 1447 aa20.95■□□□□ 0.94
SEC13-211ENST00000431352 NALCNQ8IZF0 1738 aa20.94■□□□□ 0.94
SEC13-211ENST00000431352 NUTM2BA6NNL0 878 aaPredicted RBP20.92■□□□□ 0.94
SEC13-211ENST00000431352 NUTM2EB1AL46 878 aaPredicted RBP20.92■□□□□ 0.94
SEC13-211ENST00000431352 NUTM2AQ8IVF1 878 aaPredicted RBP20.92■□□□□ 0.94
SEC13-211ENST00000431352 FOXD1Q16676 465 aa20.91■□□□□ 0.94
SEC13-211ENST00000431352 VGFO15240 615 aaPredicted RBP20.89■□□□□ 0.93
SEC13-211ENST00000431352 DDX17Q92841 729 aaKnown RBP20.89■□□□□ 0.93
SEC13-211ENST00000431352 NHSL1Q5SYE7 1610 aa20.89■□□□□ 0.93
SEC13-211ENST00000431352 PTCH1Q13635 1447 aa20.87■□□□□ 0.93
SEC13-211ENST00000431352 ROBO2Q9HCK4 1378 aa20.87■□□□□ 0.93
SEC13-211ENST00000431352 ZNF772Q68DY9 489 aaPredicted RBP20.86■□□□□ 0.93
SEC13-211ENST00000431352 PPLO60437 1756 aa20.85■□□□□ 0.93
SEC13-211ENST00000431352 SETD5Q9C0A6 1442 aa20.85■□□□□ 0.93
SEC13-211ENST00000431352 RPGRIP1LQ68CZ1 1315 aa20.84■□□□□ 0.93
SEC13-211ENST00000431352 C1orf167Q5SNV9 1468 aa20.83■□□□□ 0.93
SEC13-211ENST00000431352 CCDC144AA2RUR9 1427 aa20.82■□□□□ 0.92
SEC13-211ENST00000431352 LRRC59Q96AG4 307 aaKnown RBP20.81■□□□□ 0.92
SEC13-211ENST00000431352 RGL3Q3MIN7 710 aa20.8■□□□□ 0.92
SEC13-211ENST00000431352 PNPLA6Q8IY17 1366 aa20.8■□□□□ 0.92
SEC13-211ENST00000431352 AFF2P51816 1311 aa20.79■□□□□ 0.92
SEC13-211ENST00000431352 C8orf37Q96NL8 207 aa20.78■□□□□ 0.92
SEC13-211ENST00000431352 ORAI2Q96SN7 254 aa20.78■□□□□ 0.92
SEC13-211ENST00000431352 ADGRF5Q8IZF2 1346 aa20.78■□□□□ 0.92
SEC13-211ENST00000431352 PRAG1Q86YV5 1406 aa20.77■□□□□ 0.91
SEC13-211ENST00000431352 RXRBP28702 533 aa20.76■□□□□ 0.91
SEC13-211ENST00000431352 MPHOSPH9Q99550 1183 aa20.76■□□□□ 0.91
SEC13-211ENST00000431352 STK26Q9P289 416 aa20.75■□□□□ 0.91
SEC13-211ENST00000431352 ADAMTS2O95450 1211 aa20.74■□□□□ 0.91
SEC13-211ENST00000431352 SPATA31E1Q6ZUB1 1445 aa20.74■□□□□ 0.91
SEC13-211ENST00000431352 CDC42BPGQ6DT37 1551 aa20.72■□□□□ 0.91
SEC13-211ENST00000431352 LAMC1P11047 1609 aa20.71■□□□□ 0.91
SEC13-211ENST00000431352 IFT172Q9UG01 1749 aa20.71■□□□□ 0.91
SEC13-211ENST00000431352 SOS2Q07890 1332 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 369.3 ms