RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 SLC52A1Q9NWF4 448 aa15.53■□□□□ 0.08
HMGN1P38-201ENST00000431116 TMEM131LA2VDJ0 1609 aa15.53■□□□□ 0.08
HMGN1P38-201ENST00000431116 RRBP1Q9P2E9 1410 aaKnown RBP15.5■□□□□ 0.07
HMGN1P38-201ENST00000431116 NUP155O75694 1391 aa15.49■□□□□ 0.07
HMGN1P38-201ENST00000431116 ZFYVE9O95405 1425 aa15.49■□□□□ 0.07
HMGN1P38-201ENST00000431116 HSPA1LP34931 641 aa15.48■□□□□ 0.07
HMGN1P38-201ENST00000431116 NWD1Q149M9 1564 aa15.48■□□□□ 0.07
HMGN1P38-201ENST00000431116 SPHKAPQ2M3C7 1700 aa15.48■□□□□ 0.07
HMGN1P38-201ENST00000431116 POTEDQ86YR6 584 aa15.47■□□□□ 0.07
HMGN1P38-201ENST00000431116 SLC26A8Q96RN1 970 aa15.47■□□□□ 0.07
HMGN1P38-201ENST00000431116 RIMS2Q9UQ26 1411 aa15.47■□□□□ 0.07
HMGN1P38-201ENST00000431116 PPP1R15AO75807 674 aaPredicted RBP15.45■□□□□ 0.06
HMGN1P38-201ENST00000431116 BCANQ96GW7 911 aa15.45■□□□□ 0.06
HMGN1P38-201ENST00000431116 NKTRP30414 1462 aaKnown RBP15.45■□□□□ 0.06
HMGN1P38-201ENST00000431116 CHGAP10645 457 aaKnown RBP15.44■□□□□ 0.06
HMGN1P38-201ENST00000431116 PLEKHG1Q9ULL1 1385 aa15.44■□□□□ 0.06
HMGN1P38-201ENST00000431116 CHD2O14647 1828 aaKnown RBP15.43■□□□□ 0.06
HMGN1P38-201ENST00000431116 KCNA6P17658 529 aa15.43■□□□□ 0.06
HMGN1P38-201ENST00000431116 TMEM94Q12767 1356 aa15.43■□□□□ 0.06
HMGN1P38-201ENST00000431116 MED1Q15648 1581 aaPredicted RBP15.43■□□□□ 0.06
HMGN1P38-201ENST00000431116 ILDR2Q71H61 639 aa15.42■□□□□ 0.06
HMGN1P38-201ENST00000431116 HDGFP51858 240 aaKnown RBP15.41■□□□□ 0.06
HMGN1P38-201ENST00000431116 NAIPQ13075 1403 aa15.41■□□□□ 0.06
HMGN1P38-201ENST00000431116 DIP2AQ14689 1571 aa15.41■□□□□ 0.06
HMGN1P38-201ENST00000431116 NUTM2DQ5VT03 806 aaPredicted RBP15.39■□□□□ 0.05
HMGN1P38-201ENST00000431116 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.39■□□□□ 0.05
HMGN1P38-201ENST00000431116 PROSER2Q86WR7 435 aaPredicted RBP15.38■□□□□ 0.05
HMGN1P38-201ENST00000431116 CLTCL1P53675 1640 aa15.38■□□□□ 0.05
HMGN1P38-201ENST00000431116 TRPM2O94759 1503 aa15.38■□□□□ 0.05
HMGN1P38-201ENST00000431116 HFM1A2PYH4 1435 aa15.37■□□□□ 0.05
HMGN1P38-201ENST00000431116 ADAMTS13Q76LX8 1427 aa15.37■□□□□ 0.05
HMGN1P38-201ENST00000431116 RBM33Q96EV2 1170 aaKnown RBP15.37■□□□□ 0.05
HMGN1P38-201ENST00000431116 ROBO1Q9Y6N7 1651 aa15.37■□□□□ 0.05
HMGN1P38-201ENST00000431116 KIF1BO60333 1816 aa15.36■□□□□ 0.05
HMGN1P38-201ENST00000431116 NRXN3Q9Y4C0 1643 aa15.35■□□□□ 0.05
HMGN1P38-201ENST00000431116 MSH6P52701 1360 aa15.35■□□□□ 0.05
HMGN1P38-201ENST00000431116 TBX22Q9Y458 520 aa15.34■□□□□ 0.05
HMGN1P38-201ENST00000431116 FAM135BQ49AJ0 1406 aa15.33■□□□□ 0.04
HMGN1P38-201ENST00000431116 SETBP1Q9Y6X0 1596 aa15.32■□□□□ 0.04
HMGN1P38-201ENST00000431116 PIK3R4Q99570 1358 aa15.32■□□□□ 0.04
HMGN1P38-201ENST00000431116 NEXMIFQ5QGS0 1516 aa15.32■□□□□ 0.04
HMGN1P38-201ENST00000431116 SOCS7O14512 581 aa15.31■□□□□ 0.04
HMGN1P38-201ENST00000431116 ZNF326Q5BKZ1 582 aaKnown RBP15.31■□□□□ 0.04
HMGN1P38-201ENST00000431116 TRIM52Q96A61 297 aa15.31■□□□□ 0.04
HMGN1P38-201ENST00000431116 XRN1Q8IZH2 1706 aaKnown RBP15.31■□□□□ 0.04
HMGN1P38-201ENST00000431116 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.29■□□□□ 0.04
HMGN1P38-201ENST00000431116 PHLPP1O60346 1717 aa15.29■□□□□ 0.04
HMGN1P38-201ENST00000431116 C14orf37Q86TY3 774 aa15.28■□□□□ 0.04
HMGN1P38-201ENST00000431116 PTPRUQ92729 1446 aa15.27■□□□□ 0.04
HMGN1P38-201ENST00000431116 NCOA3Q9Y6Q9 1424 aa15.27■□□□□ 0.04
HMGN1P38-201ENST00000431116 SLC4A1APQ9BWU0 796 aaKnown RBP15.26■□□□□ 0.03
HMGN1P38-201ENST00000431116 SLAIN2Q9P270 581 aa15.25■□□□□ 0.03
HMGN1P38-201ENST00000431116 PPLO60437 1756 aa15.25■□□□□ 0.03
HMGN1P38-201ENST00000431116 AMOTL2Q9Y2J4 779 aa15.24■□□□□ 0.03
HMGN1P38-201ENST00000431116 SETD1AO15047 1707 aaKnown RBP15.23■□□□□ 0.03
HMGN1P38-201ENST00000431116 METP08581 1390 aa15.23■□□□□ 0.03
HMGN1P38-201ENST00000431116 COL16A1Q07092 1604 aaPredicted RBP15.22■□□□□ 0.03
HMGN1P38-201ENST00000431116 C19orf44Q9H6X5 657 aa15.21■□□□□ 0.03
HMGN1P38-201ENST00000431116 NALCNQ8IZF0 1738 aa15.2■□□□□ 0.02
HMGN1P38-201ENST00000431116 ATF3P18847 181 aa15.2■□□□□ 0.02
HMGN1P38-201ENST00000431116 MAPK8IP2Q13387 824 aaPredicted RBP15.2■□□□□ 0.02
HMGN1P38-201ENST00000431116 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
HMGN1P38-201ENST00000431116 CADPS2Q86UW7 1296 aa15.2■□□□□ 0.02
HMGN1P38-201ENST00000431116 DCCP43146 1447 aa15.19■□□□□ 0.02
HMGN1P38-201ENST00000431116 AHDC1Q5TGY3 1603 aaPredicted RBP15.19■□□□□ 0.02
HMGN1P38-201ENST00000431116 CCDC144AA2RUR9 1427 aa15.18■□□□□ 0.02
HMGN1P38-201ENST00000431116 IFT172Q9UG01 1749 aa15.17■□□□□ 0.02
HMGN1P38-201ENST00000431116 ADGRL3Q9HAR2 1447 aa15.17■□□□□ 0.02
HMGN1P38-201ENST00000431116 RPGRIP1LQ68CZ1 1315 aa15.17■□□□□ 0.02
HMGN1P38-201ENST00000431116 JCADQ9P266 1359 aa15.16■□□□□ 0.02
HMGN1P38-201ENST00000431116 VGFO15240 615 aaPredicted RBP15.16■□□□□ 0.02
HMGN1P38-201ENST00000431116 ASXL1Q8IXJ9 1541 aa15.16■□□□□ 0.02
HMGN1P38-201ENST00000431116 PTCH1Q13635 1447 aa15.16■□□□□ 0.02
HMGN1P38-201ENST00000431116 MST1RQ04912 1400 aa15.15■□□□□ 0.02
HMGN1P38-201ENST00000431116 SHPRHQ149N8 1683 aa15.15■□□□□ 0.02
HMGN1P38-201ENST00000431116 MPHOSPH9Q99550 1183 aa15.14■□□□□ 0.01
HMGN1P38-201ENST00000431116 NHSL1Q5SYE7 1610 aa15.14■□□□□ 0.01
HMGN1P38-201ENST00000431116 SPATA31E1Q6ZUB1 1445 aa15.13■□□□□ 0.01
HMGN1P38-201ENST00000431116 BRINP3Q76B58 766 aa15.13■□□□□ 0.01
HMGN1P38-201ENST00000431116 RGS17Q9UGC6 210 aaPredicted RBP15.13■□□□□ 0.01
HMGN1P38-201ENST00000431116 PRAG1Q86YV5 1406 aa15.12■□□□□ 0.01
HMGN1P38-201ENST00000431116 SETD5Q9C0A6 1442 aa15.12■□□□□ 0.01
HMGN1P38-201ENST00000431116 ROBO2Q9HCK4 1378 aa15.11■□□□□ 0.01
HMGN1P38-201ENST00000431116 LRP6O75581 1613 aa15.1■□□□□ 0.01
HMGN1P38-201ENST00000431116 RGL3Q3MIN7 710 aa15.08■□□□□ 0
HMGN1P38-201ENST00000431116 SPATA31A6Q5VVP1 1343 aa15.08■□□□□ 0
HMGN1P38-201ENST00000431116 ADGRF5Q8IZF2 1346 aa15.08■□□□□ 0
HMGN1P38-201ENST00000431116 ACIN1Q9UKV3 1341 aaKnown RBP15.08■□□□□ 0
HMGN1P38-201ENST00000431116 ANKRD30BQ9BXX2 1392 aa15.08■□□□□ 0
HMGN1P38-201ENST00000431116 RAB3GAP2Q9H2M9 1393 aa15.08■□□□□ 0
HMGN1P38-201ENST00000431116 KNDC1Q76NI1 1749 aa15.07■□□□□ 0
HMGN1P38-201ENST00000431116 CDC42BPGQ6DT37 1551 aa15.07■□□□□ 0
HMGN1P38-201ENST00000431116 PIK3C2GO75747 1445 aa15.06■□□□□ 0
HMGN1P38-201ENST00000431116 C1orf167Q5SNV9 1468 aa15.06■□□□□ 0
HMGN1P38-201ENST00000431116 MEX3CQ5U5Q3 659 aaKnown RBP15.05■□□□□ -0
HMGN1P38-201ENST00000431116 POTEAQ6S8J7 498 aa15.05■□□□□ -0
HMGN1P38-201ENST00000431116 LAMC1P11047 1609 aa15.05■□□□□ -0
HMGN1P38-201ENST00000431116 TECPR2O15040 1411 aa15.03■□□□□ -0
HMGN1P38-201ENST00000431116 MYOM2P54296 1465 aa15.02■□□□□ -0
HMGN1P38-201ENST00000431116 DDX17Q92841 729 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms