RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 NOS1P29475 1434 aa23.05■■□□□ 1.28
PTCD1-204ENST00000430982 PHLPP1O60346 1717 aa23.05■■□□□ 1.28
PTCD1-204ENST00000430982 KANK1Q14678 1352 aa23.04■■□□□ 1.28
PTCD1-204ENST00000430982 IDI1Q13907 227 aa23.04■■□□□ 1.28
PTCD1-204ENST00000430982 COL16A1Q07092 1604 aaPredicted RBP23.03■■□□□ 1.28
PTCD1-204ENST00000430982 JCADQ9P266 1359 aa23.02■■□□□ 1.28
PTCD1-204ENST00000430982 PROSER2Q86WR7 435 aaPredicted RBP23.02■■□□□ 1.28
PTCD1-204ENST00000430982 SLC26A8Q96RN1 970 aa23.02■■□□□ 1.28
PTCD1-204ENST00000430982 MSH6P52701 1360 aa23■■□□□ 1.27
PTCD1-204ENST00000430982 RBM33Q96EV2 1170 aaKnown RBP22.99■■□□□ 1.27
PTCD1-204ENST00000430982 STAG3Q9UJ98 1225 aa22.99■■□□□ 1.27
PTCD1-204ENST00000430982 CHD2O14647 1828 aaKnown RBP22.98■■□□□ 1.27
PTCD1-204ENST00000430982 SLAIN2Q9P270 581 aa22.97■■□□□ 1.27
PTCD1-204ENST00000430982 ZFYVE9O95405 1425 aa22.97■■□□□ 1.27
PTCD1-204ENST00000430982 LRP6O75581 1613 aa22.97■■□□□ 1.27
PTCD1-204ENST00000430982 NCOA3Q9Y6Q9 1424 aa22.94■■□□□ 1.26
PTCD1-204ENST00000430982 PLEKHG1Q9ULL1 1385 aa22.92■■□□□ 1.26
PTCD1-204ENST00000430982 SLC52A1Q9NWF4 448 aa22.92■■□□□ 1.26
PTCD1-204ENST00000430982 AHDC1Q5TGY3 1603 aaPredicted RBP22.92■■□□□ 1.26
PTCD1-204ENST00000430982 SHPRHQ149N8 1683 aa22.91■■□□□ 1.26
PTCD1-204ENST00000430982 SPATA31A6Q5VVP1 1343 aa22.91■■□□□ 1.26
PTCD1-204ENST00000430982 RPRD2Q5VT52 1461 aaKnown RBP22.91■■□□□ 1.26
PTCD1-204ENST00000430982 UPF1Q92900 1129 aaKnown RBP eCLIP22.9■■□□□ 1.26
PTCD1-204ENST00000430982 NAIPQ13075 1403 aa22.88■■□□□ 1.25
PTCD1-204ENST00000430982 UNC13BO14795 1591 aa22.88■■□□□ 1.25
PTCD1-204ENST00000430982 MYO5BQ9ULV0 1848 aa22.87■■□□□ 1.25
PTCD1-204ENST00000430982 TMEM131LA2VDJ0 1609 aa22.86■■□□□ 1.25
PTCD1-204ENST00000430982 GCC2Q8IWJ2 1684 aa22.86■■□□□ 1.25
PTCD1-204ENST00000430982 NUP155O75694 1391 aa22.86■■□□□ 1.25
PTCD1-204ENST00000430982 DIP2AQ14689 1571 aa22.85■■□□□ 1.25
PTCD1-204ENST00000430982 ZNF772Q68DY9 489 aaPredicted RBP22.85■■□□□ 1.25
PTCD1-204ENST00000430982 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.85■■□□□ 1.25
PTCD1-204ENST00000430982 HFM1A2PYH4 1435 aa22.84■■□□□ 1.25
PTCD1-204ENST00000430982 RIMS2Q9UQ26 1411 aa22.84■■□□□ 1.25
PTCD1-204ENST00000430982 CDK12Q9NYV4 1490 aaPredicted RBP22.84■■□□□ 1.25
PTCD1-204ENST00000430982 ADAMTS13Q76LX8 1427 aa22.82■■□□□ 1.24
PTCD1-204ENST00000430982 TBX22Q9Y458 520 aa22.82■■□□□ 1.24
PTCD1-204ENST00000430982 PIK3R4Q99570 1358 aa22.79■■□□□ 1.24
PTCD1-204ENST00000430982 BCANQ96GW7 911 aa22.78■■□□□ 1.24
PTCD1-204ENST00000430982 IQGAP3Q86VI3 1631 aa22.78■■□□□ 1.24
PTCD1-204ENST00000430982 CADPS2Q86UW7 1296 aa22.77■■□□□ 1.24
PTCD1-204ENST00000430982 TRIM52Q96A61 297 aa22.77■■□□□ 1.24
PTCD1-204ENST00000430982 C19orf44Q9H6X5 657 aa22.76■■□□□ 1.23
PTCD1-204ENST00000430982 HDGFP51858 240 aaKnown RBP22.75■■□□□ 1.23
PTCD1-204ENST00000430982 MEX3CQ5U5Q3 659 aaKnown RBP22.75■■□□□ 1.23
PTCD1-204ENST00000430982 DCCP43146 1447 aa22.74■■□□□ 1.23
PTCD1-204ENST00000430982 PPP1R15AO75807 674 aaPredicted RBP22.73■■□□□ 1.23
PTCD1-204ENST00000430982 RXRBP28702 533 aa22.73■■□□□ 1.23
PTCD1-204ENST00000430982 BRINP3Q76B58 766 aa22.72■■□□□ 1.23
PTCD1-204ENST00000430982 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.72■■□□□ 1.23
PTCD1-204ENST00000430982 SETD5Q9C0A6 1442 aa22.72■■□□□ 1.23
PTCD1-204ENST00000430982 TRPM2O94759 1503 aa22.71■■□□□ 1.23
PTCD1-204ENST00000430982 NHSL1Q5SYE7 1610 aa22.71■■□□□ 1.23
PTCD1-204ENST00000430982 PTPRUQ92729 1446 aa22.7■■□□□ 1.22
PTCD1-204ENST00000430982 ASXL1Q8IXJ9 1541 aa22.7■■□□□ 1.22
PTCD1-204ENST00000430982 E9PCH4 1651 aa22.69■■□□□ 1.22
PTCD1-204ENST00000430982 ATF3P18847 181 aa22.69■■□□□ 1.22
PTCD1-204ENST00000430982 XRN1Q8IZH2 1706 aaKnown RBP22.68■■□□□ 1.22
PTCD1-204ENST00000430982 C14orf37Q86TY3 774 aa22.67■■□□□ 1.22
PTCD1-204ENST00000430982 SRCAPQ6ZRS2 3230 aa22.67■■□□□ 1.22
PTCD1-204ENST00000430982 RGS12O14924 1447 aa22.65■■□□□ 1.22
PTCD1-204ENST00000430982 NRXN3Q9Y4C0 1643 aa22.65■■□□□ 1.22
PTCD1-204ENST00000430982 AFF2P51816 1311 aa22.65■■□□□ 1.22
PTCD1-204ENST00000430982 SLC4A1APQ9BWU0 796 aaKnown RBP22.65■■□□□ 1.22
PTCD1-204ENST00000430982 MST1RQ04912 1400 aa22.65■■□□□ 1.22
PTCD1-204ENST00000430982 CHGAP10645 457 aaKnown RBP22.63■■□□□ 1.21
PTCD1-204ENST00000430982 AMOTL2Q9Y2J4 779 aa22.62■■□□□ 1.21
PTCD1-204ENST00000430982 SETBP1Q9Y6X0 1596 aa22.62■■□□□ 1.21
PTCD1-204ENST00000430982 NUTM2BA6NNL0 878 aaPredicted RBP22.59■■□□□ 1.21
PTCD1-204ENST00000430982 NUTM2EB1AL46 878 aaPredicted RBP22.59■■□□□ 1.21
PTCD1-204ENST00000430982 NUTM2DQ5VT03 806 aaPredicted RBP22.59■■□□□ 1.21
PTCD1-204ENST00000430982 NUTM2AQ8IVF1 878 aaPredicted RBP22.59■■□□□ 1.21
PTCD1-204ENST00000430982 PNPLA6Q8IY17 1366 aa22.59■■□□□ 1.21
PTCD1-204ENST00000430982 RAB3GAP2Q9H2M9 1393 aa22.59■■□□□ 1.21
PTCD1-204ENST00000430982 LAMC1P11047 1609 aa22.57■■□□□ 1.2
PTCD1-204ENST00000430982 RBM6P78332 1123 aaKnown RBP22.56■■□□□ 1.2
PTCD1-204ENST00000430982 LRRC59Q96AG4 307 aaKnown RBP22.56■■□□□ 1.2
PTCD1-204ENST00000430982 ACIN1Q9UKV3 1341 aaKnown RBP22.56■■□□□ 1.2
PTCD1-204ENST00000430982 MPHOSPH9Q99550 1183 aa22.55■■□□□ 1.2
PTCD1-204ENST00000430982 FOXD1Q16676 465 aa22.54■■□□□ 1.2
PTCD1-204ENST00000430982 ADGRL3Q9HAR2 1447 aa22.54■■□□□ 1.2
PTCD1-204ENST00000430982 SPHKAPQ2M3C7 1700 aa22.54■■□□□ 1.2
PTCD1-204ENST00000430982 NALCNQ8IZF0 1738 aa22.53■■□□□ 1.2
PTCD1-204ENST00000430982 QTRT2Q9H974 415 aaKnown RBP22.52■■□□□ 1.2
PTCD1-204ENST00000430982 C8orf37Q96NL8 207 aa22.51■■□□□ 1.19
PTCD1-204ENST00000430982 METP08581 1390 aa22.5■■□□□ 1.19
PTCD1-204ENST00000430982 CLTCL1P53675 1640 aa22.47■■□□□ 1.19
PTCD1-204ENST00000430982 ZNF326Q5BKZ1 582 aaKnown RBP22.47■■□□□ 1.19
PTCD1-204ENST00000430982 DDX17Q92841 729 aaKnown RBP22.47■■□□□ 1.19
PTCD1-204ENST00000430982 ATAD2Q6PL18 1390 aa22.47■■□□□ 1.19
PTCD1-204ENST00000430982 C1orf167Q5SNV9 1468 aa22.46■■□□□ 1.19
PTCD1-204ENST00000430982 EP400Q96L91 3159 aa22.44■■□□□ 1.18
PTCD1-204ENST00000430982 HRCP23327 699 aa22.44■■□□□ 1.18
PTCD1-204ENST00000430982 NEXMIFQ5QGS0 1516 aa22.43■■□□□ 1.18
PTCD1-204ENST00000430982 NGLY1Q96IV0 654 aa22.43■■□□□ 1.18
PTCD1-204ENST00000430982 COL22A1Q8NFW1 1626 aaPredicted RBP22.42■■□□□ 1.18
PTCD1-204ENST00000430982 SOS2Q07890 1332 aaPredicted RBP22.42■■□□□ 1.18
PTCD1-204ENST00000430982 PTCH1Q13635 1447 aa22.41■■□□□ 1.18
PTCD1-204ENST00000430982 PRAG1Q86YV5 1406 aa22.41■■□□□ 1.18
PTCD1-204ENST00000430982 ATRNO75882 1429 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms