RNA–Protein interactions for RNA: ENST00000430825.3

LMBR1-206, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 1,208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-206ENST00000430825 PTPN23Q9H3S7 1636 aa26.43■■□□□ 1.82
LMBR1-206ENST00000430825 SETD1AO15047 1707 aaKnown RBP26.4■■□□□ 1.82
LMBR1-206ENST00000430825 HDGFP51858 240 aaKnown RBP26.4■■□□□ 1.82
LMBR1-206ENST00000430825 SPATA31A6Q5VVP1 1343 aa26.39■■□□□ 1.81
LMBR1-206ENST00000430825 PLEKHG1Q9ULL1 1385 aa26.38■■□□□ 1.81
LMBR1-206ENST00000430825 NCOA3Q9Y6Q9 1424 aa26.38■■□□□ 1.81
LMBR1-206ENST00000430825 ZNF772Q68DY9 489 aaPredicted RBP26.37■■□□□ 1.81
LMBR1-206ENST00000430825 FGD6Q6ZV73 1430 aa26.37■■□□□ 1.81
LMBR1-206ENST00000430825 PPP1R15AO75807 674 aaPredicted RBP26.35■■□□□ 1.81
LMBR1-206ENST00000430825 ZFYVE9O95405 1425 aa26.35■■□□□ 1.81
LMBR1-206ENST00000430825 CHIC2Q9UKJ5 165 aa26.35■■□□□ 1.81
LMBR1-206ENST00000430825 COL16A1Q07092 1604 aaPredicted RBP26.35■■□□□ 1.81
LMBR1-206ENST00000430825 RPRD2Q5VT52 1461 aaKnown RBP26.35■■□□□ 1.81
LMBR1-206ENST00000430825 MEX3CQ5U5Q3 659 aaKnown RBP26.34■■□□□ 1.81
LMBR1-206ENST00000430825 CHD2O14647 1828 aaKnown RBP26.34■■□□□ 1.81
LMBR1-206ENST00000430825 APLP2Q06481 763 aa26.32■■□□□ 1.8
LMBR1-206ENST00000430825 TBX22Q9Y458 520 aa26.32■■□□□ 1.8
LMBR1-206ENST00000430825 UPF1Q92900 1129 aaKnown RBP eCLIP26.31■■□□□ 1.8
LMBR1-206ENST00000430825 RIMS2Q9UQ26 1411 aa26.31■■□□□ 1.8
LMBR1-206ENST00000430825 C14orf37Q86TY3 774 aa26.3■■□□□ 1.8
LMBR1-206ENST00000430825 CADPS2Q86UW7 1296 aa26.3■■□□□ 1.8
LMBR1-206ENST00000430825 LRP6O75581 1613 aa26.29■■□□□ 1.8
LMBR1-206ENST00000430825 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.28■■□□□ 1.8
LMBR1-206ENST00000430825 LOC105371045A0A1W2PR82 267 aa26.27■■□□□ 1.8
LMBR1-206ENST00000430825 C19orf44Q9H6X5 657 aa26.27■■□□□ 1.8
LMBR1-206ENST00000430825 ATF3P18847 181 aa26.26■■□□□ 1.79
LMBR1-206ENST00000430825 TRIM52Q96A61 297 aa26.26■■□□□ 1.79
LMBR1-206ENST00000430825 AHDC1Q5TGY3 1603 aaPredicted RBP26.25■■□□□ 1.79
LMBR1-206ENST00000430825 ADGRL2O95490 1459 aa26.24■■□□□ 1.79
LMBR1-206ENST00000430825 PIK3R4Q99570 1358 aa26.23■■□□□ 1.79
LMBR1-206ENST00000430825 RXRBP28702 533 aa26.23■■□□□ 1.79
LMBR1-206ENST00000430825 SHPRHQ149N8 1683 aa26.22■■□□□ 1.79
LMBR1-206ENST00000430825 TMEM131LA2VDJ0 1609 aa26.22■■□□□ 1.79
LMBR1-206ENST00000430825 ANKRD50Q9ULJ7 1429 aa26.22■■□□□ 1.79
LMBR1-206ENST00000430825 GCC2Q8IWJ2 1684 aa26.22■■□□□ 1.79
LMBR1-206ENST00000430825 MYO5BQ9ULV0 1848 aa26.21■■□□□ 1.79
LMBR1-206ENST00000430825 DIP2AQ14689 1571 aa26.2■■□□□ 1.78
LMBR1-206ENST00000430825 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.19■■□□□ 1.78
LMBR1-206ENST00000430825 ADAMTS13Q76LX8 1427 aa26.19■■□□□ 1.78
LMBR1-206ENST00000430825 CDK12Q9NYV4 1490 aaPredicted RBP26.18■■□□□ 1.78
LMBR1-206ENST00000430825 CHGAP10645 457 aaKnown RBP26.18■■□□□ 1.78
LMBR1-206ENST00000430825 BRINP3Q76B58 766 aa26.15■■□□□ 1.78
LMBR1-206ENST00000430825 NUTM2BA6NNL0 878 aaPredicted RBP26.13■■□□□ 1.77
LMBR1-206ENST00000430825 NUTM2EB1AL46 878 aaPredicted RBP26.13■■□□□ 1.77
LMBR1-206ENST00000430825 NUTM2AQ8IVF1 878 aaPredicted RBP26.13■■□□□ 1.77
LMBR1-206ENST00000430825 NUTM2DQ5VT03 806 aaPredicted RBP26.12■■□□□ 1.77
LMBR1-206ENST00000430825 AMOTL2Q9Y2J4 779 aa26.12■■□□□ 1.77
LMBR1-206ENST00000430825 DCCP43146 1447 aa26.12■■□□□ 1.77
LMBR1-206ENST00000430825 TRPM2O94759 1503 aa26.11■■□□□ 1.77
LMBR1-206ENST00000430825 FAM50AQ14320 339 aaKnown RBP26.1■■□□□ 1.77
LMBR1-206ENST00000430825 AFF2P51816 1311 aa26.1■■□□□ 1.77
LMBR1-206ENST00000430825 SETD5Q9C0A6 1442 aa26.08■■□□□ 1.77
LMBR1-206ENST00000430825 PTPRUQ92729 1446 aa26.05■■□□□ 1.76
LMBR1-206ENST00000430825 ASXL1Q8IXJ9 1541 aa26.05■■□□□ 1.76
LMBR1-206ENST00000430825 UNC13BO14795 1591 aa26.05■■□□□ 1.76
LMBR1-206ENST00000430825 LRRC59Q96AG4 307 aaKnown RBP26.05■■□□□ 1.76
LMBR1-206ENST00000430825 E9PCH4 1651 aa26.03■■□□□ 1.76
LMBR1-206ENST00000430825 RBM6P78332 1123 aaKnown RBP26.02■■□□□ 1.76
LMBR1-206ENST00000430825 MST1RQ04912 1400 aa26■■□□□ 1.75
LMBR1-206ENST00000430825 QTRT2Q9H974 415 aaKnown RBP26■■□□□ 1.75
LMBR1-206ENST00000430825 C8orf37Q96NL8 207 aa25.99■■□□□ 1.75
LMBR1-206ENST00000430825 NHSL1Q5SYE7 1610 aa25.98■■□□□ 1.75
LMBR1-206ENST00000430825 RGS12O14924 1447 aa25.97■■□□□ 1.75
LMBR1-206ENST00000430825 XRN1Q8IZH2 1706 aaKnown RBP25.97■■□□□ 1.75
LMBR1-206ENST00000430825 IQGAP3Q86VI3 1631 aa25.96■■□□□ 1.75
LMBR1-206ENST00000430825 SETBP1Q9Y6X0 1596 aa25.95■■□□□ 1.74
LMBR1-206ENST00000430825 PNPLA6Q8IY17 1366 aa25.95■■□□□ 1.74
LMBR1-206ENST00000430825 ROCK1Q13464 1354 aa25.94■■□□□ 1.74
LMBR1-206ENST00000430825 NGLY1Q96IV0 654 aa25.93■■□□□ 1.74
LMBR1-206ENST00000430825 NUP155O75694 1391 aa25.92■■□□□ 1.74
LMBR1-206ENST00000430825 ADGRL3Q9HAR2 1447 aa25.91■■□□□ 1.74
LMBR1-206ENST00000430825 NRXN3Q9Y4C0 1643 aa25.91■■□□□ 1.74
LMBR1-206ENST00000430825 METP08581 1390 aa25.89■■□□□ 1.74
LMBR1-206ENST00000430825 ATAD2Q6PL18 1390 aa25.88■■□□□ 1.73
LMBR1-206ENST00000430825 FOXD1Q16676 465 aa25.88■■□□□ 1.73
LMBR1-206ENST00000430825 ZNF326Q5BKZ1 582 aaKnown RBP25.88■■□□□ 1.73
LMBR1-206ENST00000430825 DDX17Q92841 729 aaKnown RBP25.88■■□□□ 1.73
LMBR1-206ENST00000430825 ADAMTS2O95450 1211 aa25.85■■□□□ 1.73
LMBR1-206ENST00000430825 SRCAPQ6ZRS2 3230 aa25.84■■□□□ 1.73
LMBR1-206ENST00000430825 C1orf167Q5SNV9 1468 aa25.81■■□□□ 1.72
LMBR1-206ENST00000430825 USP21Q9UK80 565 aa25.81■■□□□ 1.72
LMBR1-206ENST00000430825 TRPC5Q9UL62 973 aaPredicted RBP25.81■■□□□ 1.72
LMBR1-206ENST00000430825 SOS2Q07890 1332 aaPredicted RBP25.79■■□□□ 1.72
LMBR1-206ENST00000430825 NALCNQ8IZF0 1738 aa25.79■■□□□ 1.72
LMBR1-206ENST00000430825 LAMC1P11047 1609 aa25.78■■□□□ 1.72
LMBR1-206ENST00000430825 ZRANB1Q9UGI0 708 aa25.78■■□□□ 1.72
LMBR1-206ENST00000430825 PTCH1Q13635 1447 aa25.78■■□□□ 1.72
LMBR1-206ENST00000430825 SPHKAPQ2M3C7 1700 aa25.77■■□□□ 1.72
LMBR1-206ENST00000430825 FNBP4Q8N3X1 1017 aaPredicted RBP25.77■■□□□ 1.72
LMBR1-206ENST00000430825 CCDC125Q86Z20 511 aa25.73■■□□□ 1.71
LMBR1-206ENST00000430825 NEXMIFQ5QGS0 1516 aa25.73■■□□□ 1.71
LMBR1-206ENST00000430825 ATRNO75882 1429 aa25.72■■□□□ 1.71
LMBR1-206ENST00000430825 ORAI2Q96SN7 254 aa25.72■■□□□ 1.71
LMBR1-206ENST00000430825 ITGAEP38570 1179 aa25.68■■□□□ 1.7
LMBR1-206ENST00000430825 ROBO2Q9HCK4 1378 aa25.68■■□□□ 1.7
LMBR1-206ENST00000430825 VGFO15240 615 aaPredicted RBP25.67■■□□□ 1.7
LMBR1-206ENST00000430825 PRAG1Q86YV5 1406 aa25.66■■□□□ 1.7
LMBR1-206ENST00000430825 CLTCL1P53675 1640 aa25.66■■□□□ 1.7
LMBR1-206ENST00000430825 COL22A1Q8NFW1 1626 aaPredicted RBP25.66■■□□□ 1.7
LMBR1-206ENST00000430825 NPHP3Q7Z494 1330 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 194.5 ms