RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 ITGAEP38570 1179 aa25.01■■□□□ 1.59
PTPRA-206ENST00000430705 MED1Q15648 1581 aaPredicted RBP24.98■■□□□ 1.59
PTPRA-206ENST00000430705 RIMS2Q9UQ26 1411 aa24.97■■□□□ 1.59
PTPRA-206ENST00000430705 SLC26A8Q96RN1 970 aa24.97■■□□□ 1.59
PTPRA-206ENST00000430705 NUP155O75694 1391 aa24.96■■□□□ 1.59
PTPRA-206ENST00000430705 PLEKHG1Q9ULL1 1385 aa24.94■■□□□ 1.58
PTPRA-206ENST00000430705 SPHKAPQ2M3C7 1700 aa24.94■■□□□ 1.58
PTPRA-206ENST00000430705 NKTRP30414 1462 aaKnown RBP24.94■■□□□ 1.58
PTPRA-206ENST00000430705 TMEM94Q12767 1356 aa24.93■■□□□ 1.58
PTPRA-206ENST00000430705 CHD2O14647 1828 aaKnown RBP24.92■■□□□ 1.58
PTPRA-206ENST00000430705 KCNA6P17658 529 aa24.91■■□□□ 1.58
PTPRA-206ENST00000430705 NAIPQ13075 1403 aa24.89■■□□□ 1.58
PTPRA-206ENST00000430705 SENP3Q9H4L4 574 aaPredicted RBP24.89■■□□□ 1.58
PTPRA-206ENST00000430705 ADAMTS13Q76LX8 1427 aa24.88■■□□□ 1.57
PTPRA-206ENST00000430705 RBM33Q96EV2 1170 aaKnown RBP24.86■■□□□ 1.57
PTPRA-206ENST00000430705 DIP2AQ14689 1571 aa24.85■■□□□ 1.57
PTPRA-206ENST00000430705 NRXN3Q9Y4C0 1643 aa24.85■■□□□ 1.57
PTPRA-206ENST00000430705 CLTCL1P53675 1640 aa24.84■■□□□ 1.57
PTPRA-206ENST00000430705 ROBO1Q9Y6N7 1651 aa24.83■■□□□ 1.57
PTPRA-206ENST00000430705 CHGAP10645 457 aaKnown RBP24.83■■□□□ 1.57
PTPRA-206ENST00000430705 NUTM2DQ5VT03 806 aaPredicted RBP24.82■■□□□ 1.56
PTPRA-206ENST00000430705 TRPM2O94759 1503 aa24.81■■□□□ 1.56
PTPRA-206ENST00000430705 PPP1R15AO75807 674 aaPredicted RBP24.81■■□□□ 1.56
PTPRA-206ENST00000430705 FAM135BQ49AJ0 1406 aa24.8■■□□□ 1.56
PTPRA-206ENST00000430705 SOCS7O14512 581 aa24.8■■□□□ 1.56
PTPRA-206ENST00000430705 PROSER2Q86WR7 435 aaPredicted RBP24.8■■□□□ 1.56
PTPRA-206ENST00000430705 BCANQ96GW7 911 aa24.79■■□□□ 1.56
PTPRA-206ENST00000430705 HFM1A2PYH4 1435 aa24.78■■□□□ 1.56
PTPRA-206ENST00000430705 SETBP1Q9Y6X0 1596 aa24.77■■□□□ 1.56
PTPRA-206ENST00000430705 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.77■■□□□ 1.56
PTPRA-206ENST00000430705 TBX22Q9Y458 520 aa24.77■■□□□ 1.56
PTPRA-206ENST00000430705 PTPRUQ92729 1446 aa24.76■■□□□ 1.55
PTPRA-206ENST00000430705 NEXMIFQ5QGS0 1516 aa24.76■■□□□ 1.55
PTPRA-206ENST00000430705 XRN1Q8IZH2 1706 aaKnown RBP24.75■■□□□ 1.55
PTPRA-206ENST00000430705 HDGFP51858 240 aaKnown RBP24.74■■□□□ 1.55
PTPRA-206ENST00000430705 MSH6P52701 1360 aa24.72■■□□□ 1.55
PTPRA-206ENST00000430705 PIK3R4Q99570 1358 aa24.72■■□□□ 1.55
PTPRA-206ENST00000430705 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.7■■□□□ 1.54
PTPRA-206ENST00000430705 KIF1BO60333 1816 aa24.69■■□□□ 1.54
PTPRA-206ENST00000430705 NCOA3Q9Y6Q9 1424 aa24.68■■□□□ 1.54
PTPRA-206ENST00000430705 PHLPP1O60346 1717 aa24.66■■□□□ 1.54
PTPRA-206ENST00000430705 SETD1AO15047 1707 aaKnown RBP24.65■■□□□ 1.54
PTPRA-206ENST00000430705 COL16A1Q07092 1604 aaPredicted RBP24.64■■□□□ 1.54
PTPRA-206ENST00000430705 METP08581 1390 aa24.63■■□□□ 1.53
PTPRA-206ENST00000430705 SLAIN2Q9P270 581 aa24.62■■□□□ 1.53
PTPRA-206ENST00000430705 AMOTL2Q9Y2J4 779 aa24.61■■□□□ 1.53
PTPRA-206ENST00000430705 ZNF326Q5BKZ1 582 aaKnown RBP24.6■■□□□ 1.53
PTPRA-206ENST00000430705 PPLO60437 1756 aa24.58■■□□□ 1.53
PTPRA-206ENST00000430705 TRIM52Q96A61 297 aa24.58■■□□□ 1.53
PTPRA-206ENST00000430705 PHF23Q9BUL5 403 aaPredicted RBP24.58■■□□□ 1.53
PTPRA-206ENST00000430705 RGS17Q9UGC6 210 aaPredicted RBP24.58■■□□□ 1.53
PTPRA-206ENST00000430705 AHDC1Q5TGY3 1603 aaPredicted RBP24.57■■□□□ 1.52
PTPRA-206ENST00000430705 NALCNQ8IZF0 1738 aa24.57■■□□□ 1.52
PTPRA-206ENST00000430705 DCCP43146 1447 aa24.54■■□□□ 1.52
PTPRA-206ENST00000430705 SLC4A1APQ9BWU0 796 aaKnown RBP24.54■■□□□ 1.52
PTPRA-206ENST00000430705 C19orf44Q9H6X5 657 aa24.53■■□□□ 1.52
PTPRA-206ENST00000430705 FOXD1Q16676 465 aa24.52■■□□□ 1.52
PTPRA-206ENST00000430705 C14orf37Q86TY3 774 aa24.52■■□□□ 1.52
PTPRA-206ENST00000430705 MST1RQ04912 1400 aa24.51■■□□□ 1.51
PTPRA-206ENST00000430705 IFT172Q9UG01 1749 aa24.5■■□□□ 1.51
PTPRA-206ENST00000430705 CADPS2Q86UW7 1296 aa24.5■■□□□ 1.51
PTPRA-206ENST00000430705 ADGRL3Q9HAR2 1447 aa24.49■■□□□ 1.51
PTPRA-206ENST00000430705 ASXL1Q8IXJ9 1541 aa24.49■■□□□ 1.51
PTPRA-206ENST00000430705 SHPRHQ149N8 1683 aa24.49■■□□□ 1.51
PTPRA-206ENST00000430705 LRP6O75581 1613 aa24.48■■□□□ 1.51
PTPRA-206ENST00000430705 NHSL1Q5SYE7 1610 aa24.48■■□□□ 1.51
PTPRA-206ENST00000430705 PRAG1Q86YV5 1406 aa24.48■■□□□ 1.51
PTPRA-206ENST00000430705 JCADQ9P266 1359 aa24.48■■□□□ 1.51
PTPRA-206ENST00000430705 PTCH1Q13635 1447 aa24.47■■□□□ 1.51
PTPRA-206ENST00000430705 ATF3P18847 181 aa24.47■■□□□ 1.51
PTPRA-206ENST00000430705 SPATA31E1Q6ZUB1 1445 aa24.46■■□□□ 1.51
PTPRA-206ENST00000430705 BRINP3Q76B58 766 aa24.45■■□□□ 1.5
PTPRA-206ENST00000430705 ROBO2Q9HCK4 1378 aa24.43■■□□□ 1.5
PTPRA-206ENST00000430705 RPGRIP1LQ68CZ1 1315 aa24.42■■□□□ 1.5
PTPRA-206ENST00000430705 VGFO15240 615 aaPredicted RBP24.41■■□□□ 1.5
PTPRA-206ENST00000430705 POTEAQ6S8J7 498 aa24.41■■□□□ 1.5
PTPRA-206ENST00000430705 CCDC144AA2RUR9 1427 aa24.41■■□□□ 1.5
PTPRA-206ENST00000430705 MPHOSPH9Q99550 1183 aa24.4■■□□□ 1.5
PTPRA-206ENST00000430705 LAMC1P11047 1609 aa24.37■■□□□ 1.49
PTPRA-206ENST00000430705 ADGRF5Q8IZF2 1346 aa24.36■■□□□ 1.49
PTPRA-206ENST00000430705 SETD5Q9C0A6 1442 aa24.36■■□□□ 1.49
PTPRA-206ENST00000430705 C1orf167Q5SNV9 1468 aa24.34■■□□□ 1.49
PTPRA-206ENST00000430705 SPATA31A6Q5VVP1 1343 aa24.34■■□□□ 1.49
PTPRA-206ENST00000430705 KNDC1Q76NI1 1749 aa24.32■■□□□ 1.48
PTPRA-206ENST00000430705 PIK3C2GO75747 1445 aa24.32■■□□□ 1.48
PTPRA-206ENST00000430705 CDC42BPGQ6DT37 1551 aa24.31■■□□□ 1.48
PTPRA-206ENST00000430705 DDX17Q92841 729 aaKnown RBP24.31■■□□□ 1.48
PTPRA-206ENST00000430705 RAB3GAP2Q9H2M9 1393 aa24.3■■□□□ 1.48
PTPRA-206ENST00000430705 TECPR2O15040 1411 aa24.3■■□□□ 1.48
PTPRA-206ENST00000430705 RGL3Q3MIN7 710 aa24.29■■□□□ 1.48
PTPRA-206ENST00000430705 ANKRD30BQ9BXX2 1392 aa24.29■■□□□ 1.48
PTPRA-206ENST00000430705 NRXN1Q9ULB1 1477 aa24.27■■□□□ 1.48
PTPRA-206ENST00000430705 PNPLA6Q8IY17 1366 aa24.25■■□□□ 1.47
PTPRA-206ENST00000430705 LRPPRCP42704 1394 aaKnown RBP24.24■■□□□ 1.47
PTPRA-206ENST00000430705 MYOM2P54296 1465 aa24.24■■□□□ 1.47
PTPRA-206ENST00000430705 PLEKHH1Q9ULM0 1364 aa24.22■■□□□ 1.47
PTPRA-206ENST00000430705 ORAI2Q96SN7 254 aa24.22■■□□□ 1.47
PTPRA-206ENST00000430705 YTHDC2Q9H6S0 1430 aaKnown RBP24.19■■□□□ 1.46
PTPRA-206ENST00000430705 ABCC11Q96J66 1382 aa24.19■■□□□ 1.46
PTPRA-206ENST00000430705 FMN2Q9NZ56 1722 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms