RNA–Protein interactions for RNA: ENST00000430644.5

PCGF3-205, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 2,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-205ENST00000430644 CCDC146Q8IYE0 955 aa22.43■■□□□ 1.18
PCGF3-205ENST00000430644 CDC42BPAQ5VT25 1732 aa22.43■■□□□ 1.18
PCGF3-205ENST00000430644 A2MP01023 1474 aa22.42■■□□□ 1.18
PCGF3-205ENST00000430644 ADCY10Q96PN6 1610 aa22.42■■□□□ 1.18
PCGF3-205ENST00000430644 VIRMAQ69YN4 1812 aaKnown RBP22.42■■□□□ 1.18
PCGF3-205ENST00000430644 MAGI2Q86UL8 1455 aa22.41■■□□□ 1.18
PCGF3-205ENST00000430644 NLRP1Q9C000 1473 aa22.41■■□□□ 1.18
PCGF3-205ENST00000430644 KNSTRNQ9Y448 316 aa22.41■■□□□ 1.18
PCGF3-205ENST00000430644 XRCC6P12956 609 aaKnown RBP eCLIP22.4■■□□□ 1.181e-6■■■□□ 17.2
PCGF3-205ENST00000430644 FAM135AQ9P2D6 1515 aa22.4■■□□□ 1.18
PCGF3-205ENST00000430644 HNRNPMP52272 730 aaKnown RBP eCLIP22.4■■□□□ 1.187e-7■■■■■ 38.1
PCGF3-205ENST00000430644 NKTRP30414 1462 aaKnown RBP22.39■■□□□ 1.17
PCGF3-205ENST00000430644 AMER1Q5JTC6 1135 aaPredicted RBP22.38■■□□□ 1.17
PCGF3-205ENST00000430644 MAPK8IP3Q9UPT6 1336 aa22.38■■□□□ 1.17
PCGF3-205ENST00000430644 ABCA8O94911 1581 aa22.37■■□□□ 1.17
PCGF3-205ENST00000430644 APAF1O14727 1248 aa22.37■■□□□ 1.17
PCGF3-205ENST00000430644 PLA2R1Q13018 1463 aa22.37■■□□□ 1.17
PCGF3-205ENST00000430644 WDR7Q9Y4E6 1490 aa22.36■■□□□ 1.17
PCGF3-205ENST00000430644 LAMC1P11047 1609 aa22.36■■□□□ 1.17
PCGF3-205ENST00000430644 PANK2Q9BZ23 570 aa22.36■■□□□ 1.17
PCGF3-205ENST00000430644 NAP1L5Q96NT1 182 aaPredicted RBP22.35■■□□□ 1.17
PCGF3-205ENST00000430644 CLUAP1Q96AJ1 413 aa22.35■■□□□ 1.17
PCGF3-205ENST00000430644 PKNOX2Q96KN3 472 aa22.35■■□□□ 1.17
PCGF3-205ENST00000430644 TBC1D2Q9BYX2 928 aa22.35■■□□□ 1.17
PCGF3-205ENST00000430644 DMRT2Q9Y5R5 561 aa22.35■■□□□ 1.17
PCGF3-205ENST00000430644 GOLGA6L3A6NEY3 463 aa22.34■■□□□ 1.17
PCGF3-205ENST00000430644 COG6Q9Y2V7 657 aa22.34■■□□□ 1.17
PCGF3-205ENST00000430644 CGNL1Q0VF96 1302 aa22.34■■□□□ 1.17
PCGF3-205ENST00000430644 ATP10BO94823 1461 aa22.34■■□□□ 1.17
PCGF3-205ENST00000430644 FSD2A1L4K1 749 aa22.34■■□□□ 1.17
PCGF3-205ENST00000430644 PANK1Q8TE04 598 aa22.34■■□□□ 1.17
PCGF3-205ENST00000430644 GZF1Q9H116 711 aaPredicted RBP22.33■■□□□ 1.17
PCGF3-205ENST00000430644 PNNQ9H307 717 aaKnown RBP22.33■■□□□ 1.16
PCGF3-205ENST00000430644 ABCC10Q5T3U5 1492 aa22.33■■□□□ 1.16
PCGF3-205ENST00000430644 PDE3AQ14432 1141 aa22.31■■□□□ 1.16
PCGF3-205ENST00000430644 TBC1D32Q96NH3 1257 aa22.31■■□□□ 1.16
PCGF3-205ENST00000430644 PLEKHD1A6NEE1 506 aa22.31■■□□□ 1.16
PCGF3-205ENST00000430644 E9PSI1 815 aa22.31■■□□□ 1.16
PCGF3-205ENST00000430644 CLCN1P35523 988 aa22.31■■□□□ 1.16
PCGF3-205ENST00000430644 SPRYD3Q8NCJ5 442 aa22.31■■□□□ 1.16
PCGF3-205ENST00000430644 GLIPR1L2Q4G1C9 344 aa22.29■■□□□ 1.16
PCGF3-205ENST00000430644 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.29■■□□□ 1.162e-7■■■□□ 14.8
PCGF3-205ENST00000430644 MCM4P33991 863 aa22.28■■□□□ 1.16
PCGF3-205ENST00000430644 UPF2Q9HAU5 1272 aaKnown RBP22.28■■□□□ 1.16
PCGF3-205ENST00000430644 CANXP27824 592 aaKnown RBP22.27■■□□□ 1.16
PCGF3-205ENST00000430644 PIK3C2GO75747 1445 aa22.27■■□□□ 1.16
PCGF3-205ENST00000430644 CCDC141Q6ZP82 1450 aa22.25■■□□□ 1.15
PCGF3-205ENST00000430644 CENPJQ9HC77 1338 aaPredicted RBP22.25■■□□□ 1.15
PCGF3-205ENST00000430644 VSIG10Q8N0Z9 540 aa22.25■■□□□ 1.15
PCGF3-205ENST00000430644 EIF2AK4Q9P2K8 1649 aaKnown RBP22.25■■□□□ 1.15
PCGF3-205ENST00000430644 MYO5CQ9NQX4 1742 aa22.24■■□□□ 1.15
PCGF3-205ENST00000430644 HSP90AA2PQ14568 343 aaPredicted RBP22.24■■□□□ 1.15
PCGF3-205ENST00000430644 PCDHB15Q9Y5E8 787 aa22.23■■□□□ 1.15
PCGF3-205ENST00000430644 HSP90AA1P07900 732 aaKnown RBP22.23■■□□□ 1.15
PCGF3-205ENST00000430644 ASXL1Q8IXJ9 1541 aa22.23■■□□□ 1.15
PCGF3-205ENST00000430644 ABCC2Q92887 1545 aa22.23■■□□□ 1.15
PCGF3-205ENST00000430644 ZMYND15Q9H091 742 aa22.22■■□□□ 1.15
PCGF3-205ENST00000430644 TRAK2O60296 914 aa22.21■■□□□ 1.15
PCGF3-205ENST00000430644 PDZRN3Q9UPQ7 1066 aa22.21■■□□□ 1.15
PCGF3-205ENST00000430644 ARHGEF5Q12774 1597 aa22.21■■□□□ 1.15
PCGF3-205ENST00000430644 NINLQ9Y2I6 1382 aa22.2■■□□□ 1.14
PCGF3-205ENST00000430644 PMFBP1Q8TBY8 1022 aa22.19■■□□□ 1.14
PCGF3-205ENST00000430644 TNNQ9UQP3 1299 aa22.19■■□□□ 1.14
PCGF3-205ENST00000430644 RRP9O43818 475 aaKnown RBP22.19■■□□□ 1.14
PCGF3-205ENST00000430644 RLBP1P12271 317 aa22.17■■□□□ 1.14
PCGF3-205ENST00000430644 MRE11P49959 708 aa22.17■■□□□ 1.14
PCGF3-205ENST00000430644 RNF17Q9BXT8 1623 aaKnown RBP22.17■■□□□ 1.14
PCGF3-205ENST00000430644 WWC1Q8IX03 1113 aa22.17■■□□□ 1.14
PCGF3-205ENST00000430644 CHMP5Q9NZZ3 219 aa22.16■■□□□ 1.14
PCGF3-205ENST00000430644 SYNMO15061 1565 aa22.16■■□□□ 1.14
PCGF3-205ENST00000430644 CDCA8Q53HL2 280 aa22.15■■□□□ 1.14
PCGF3-205ENST00000430644 NPC1L1Q9UHC9 1359 aa22.14■■□□□ 1.13
PCGF3-205ENST00000430644 ERBB4Q15303 1308 aa22.14■■□□□ 1.13
PCGF3-205ENST00000430644 RARSP54136 660 aaKnown RBP22.13■■□□□ 1.13
PCGF3-205ENST00000430644 GRPEL1Q9HAV7 217 aa22.13■■□□□ 1.13
PCGF3-205ENST00000430644 ZMYM3Q14202 1370 aa22.13■■□□□ 1.13
PCGF3-205ENST00000430644 MYH16Q9H6N6 1097 aa22.13■■□□□ 1.13
PCGF3-205ENST00000430644 UNC13BO14795 1591 aa22.12■■□□□ 1.13
PCGF3-205ENST00000430644 ESPNB1AK53 854 aa22.12■■□□□ 1.13
PCGF3-205ENST00000430644 PLXNC1O60486 1568 aa22.12■■□□□ 1.13
PCGF3-205ENST00000430644 SAMD9LQ8IVG5 1584 aa22.12■■□□□ 1.13
PCGF3-205ENST00000430644 BCL2L13Q9BXK5 485 aa22.11■■□□□ 1.13
PCGF3-205ENST00000430644 NGEFQ8N5V2 710 aa22.11■■□□□ 1.13
PCGF3-205ENST00000430644 C22orf23Q9BZE7 217 aa22.11■■□□□ 1.13
PCGF3-205ENST00000430644 NEUROD2Q15784 382 aa22.1■■□□□ 1.13
PCGF3-205ENST00000430644 RTEL1-TNFRSF6BF6WH68 1400 aa22.1■■□□□ 1.13
PCGF3-205ENST00000430644 MFAP1P55081 439 aaKnown RBP22.1■■□□□ 1.13
PCGF3-205ENST00000430644 ZCCHC11Q5TAX3 1644 aaKnown RBP22.09■■□□□ 1.13
PCGF3-205ENST00000430644 CYB5RLQ6IPT4 315 aa22.09■■□□□ 1.13
PCGF3-205ENST00000430644 RWDD1Q9H446 243 aaPredicted RBP22.09■■□□□ 1.13
PCGF3-205ENST00000430644 IQGAP1P46940 1657 aa22.08■■□□□ 1.13
PCGF3-205ENST00000430644 AAMPQ13685 434 aa22.08■■□□□ 1.13
PCGF3-205ENST00000430644 RSPH4AQ5TD94 716 aa22.08■■□□□ 1.13
PCGF3-205ENST00000430644 RRP7AQ9Y3A4 280 aaKnown RBP22.08■■□□□ 1.13
PCGF3-205ENST00000430644 ATP10AO60312 1499 aa22.08■■□□□ 1.12
PCGF3-205ENST00000430644 MYOM1P52179 1685 aa22.07■■□□□ 1.12
PCGF3-205ENST00000430644 ZNF692Q9BU19 519 aaPredicted RBP22.07■■□□□ 1.12
PCGF3-205ENST00000430644 IQGAP3Q86VI3 1631 aa22.06■■□□□ 1.12
PCGF3-205ENST00000430644 UHRF1BP1LA0JNW5 1464 aa22.06■■□□□ 1.12
PCGF3-205ENST00000430644 SCAF11Q99590 1463 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms