RNA–Protein interactions for RNA: ENST00000430374.5

SMARCAL1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-207ENST00000430374 RIMS2Q9UQ26 1411 aa13.94□□□□□ -0.18
SMARCAL1-207ENST00000430374 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.93□□□□□ -0.18
SMARCAL1-207ENST00000430374 DHX57Q6P158 1386 aaKnown RBP13.93□□□□□ -0.18
SMARCAL1-207ENST00000430374 RPGRIP1LQ68CZ1 1315 aa13.91□□□□□ -0.18
SMARCAL1-207ENST00000430374 PLEKHG1Q9ULL1 1385 aa13.91□□□□□ -0.18
SMARCAL1-207ENST00000430374 ZNF326Q5BKZ1 582 aaKnown RBP13.9□□□□□ -0.18
SMARCAL1-207ENST00000430374 POLR1AO95602 1720 aaPredicted RBP13.89□□□□□ -0.19
SMARCAL1-207ENST00000430374 NEXMIFQ5QGS0 1516 aa13.89□□□□□ -0.19
SMARCAL1-207ENST00000430374 PPP1R15AO75807 674 aaPredicted RBP13.88□□□□□ -0.19
SMARCAL1-207ENST00000430374 IQGAP1P46940 1657 aa13.87□□□□□ -0.19
SMARCAL1-207ENST00000430374 VGFO15240 615 aaPredicted RBP13.86□□□□□ -0.19
SMARCAL1-207ENST00000430374 RGL3Q3MIN7 710 aa13.86□□□□□ -0.19
SMARCAL1-207ENST00000430374 NUTM2DQ5VT03 806 aaPredicted RBP13.86□□□□□ -0.19
SMARCAL1-207ENST00000430374 ADAMTS13Q76LX8 1427 aa13.85□□□□□ -0.19
SMARCAL1-207ENST00000430374 KIF1BO60333 1816 aa13.85□□□□□ -0.19
SMARCAL1-207ENST00000430374 MYO5BQ9ULV0 1848 aa13.85□□□□□ -0.19
SMARCAL1-207ENST00000430374 TBX22Q9Y458 520 aa13.84□□□□□ -0.19
SMARCAL1-207ENST00000430374 SETBP1Q9Y6X0 1596 aa13.83□□□□□ -0.19
SMARCAL1-207ENST00000430374 SLC26A8Q96RN1 970 aa13.83□□□□□ -0.2
SMARCAL1-207ENST00000430374 ZNF335Q9H4Z2 1342 aaPredicted RBP13.83□□□□□ -0.2
SMARCAL1-207ENST00000430374 STAC3Q96MF2 364 aa13.82□□□□□ -0.2
SMARCAL1-207ENST00000430374 MYOM2P54296 1465 aa13.81□□□□□ -0.2
SMARCAL1-207ENST00000430374 DIP2AQ14689 1571 aa13.81□□□□□ -0.2
SMARCAL1-207ENST00000430374 BCANQ96GW7 911 aa13.81□□□□□ -0.2
SMARCAL1-207ENST00000430374 LTBP4Q8N2S1 1624 aa13.81□□□□□ -0.2
SMARCAL1-207ENST00000430374 ADGRF5Q8IZF2 1346 aa13.81□□□□□ -0.2
SMARCAL1-207ENST00000430374 PIK3R4Q99570 1358 aa13.81□□□□□ -0.2
SMARCAL1-207ENST00000430374 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
SMARCAL1-207ENST00000430374 PIK3C2GO75747 1445 aa13.8□□□□□ -0.2
SMARCAL1-207ENST00000430374 SIN3AQ96ST3 1273 aa13.79□□□□□ -0.2
SMARCAL1-207ENST00000430374 NRXN3Q9Y4C0 1643 aa13.79□□□□□ -0.2
SMARCAL1-207ENST00000430374 PPLO60437 1756 aa13.78□□□□□ -0.2
SMARCAL1-207ENST00000430374 KCNA6P17658 529 aa13.78□□□□□ -0.2
SMARCAL1-207ENST00000430374 CLSPNQ9HAW4 1339 aa13.78□□□□□ -0.2
SMARCAL1-207ENST00000430374 CPS1P31327 1500 aa13.78□□□□□ -0.2
SMARCAL1-207ENST00000430374 METP08581 1390 aa13.77□□□□□ -0.21
SMARCAL1-207ENST00000430374 DCAF11Q8TEB1 546 aa13.77□□□□□ -0.21
SMARCAL1-207ENST00000430374 SENP3Q9H4L4 574 aaPredicted RBP13.77□□□□□ -0.21
SMARCAL1-207ENST00000430374 IFT172Q9UG01 1749 aa13.76□□□□□ -0.21
SMARCAL1-207ENST00000430374 NWD1Q149M9 1564 aa13.75□□□□□ -0.21
SMARCAL1-207ENST00000430374 NEUROD1Q13562 356 aa13.75□□□□□ -0.21
SMARCAL1-207ENST00000430374 CERKQ8TCT0 537 aa13.75□□□□□ -0.21
SMARCAL1-207ENST00000430374 ALKQ9UM73 1620 aa13.75□□□□□ -0.21
SMARCAL1-207ENST00000430374 NKTRP30414 1462 aaKnown RBP13.74□□□□□ -0.21
SMARCAL1-207ENST00000430374 PTPRUQ92729 1446 aa13.74□□□□□ -0.21
SMARCAL1-207ENST00000430374 L3MBTL2Q969R5 705 aa13.74□□□□□ -0.21
SMARCAL1-207ENST00000430374 C14orf93Q9H972 538 aaKnown RBP13.74□□□□□ -0.21
SMARCAL1-207ENST00000430374 IQSEC2Q5JU85 1478 aa13.74□□□□□ -0.21
SMARCAL1-207ENST00000430374 PRAG1Q86YV5 1406 aa13.73□□□□□ -0.21
SMARCAL1-207ENST00000430374 LRRC7Q96NW7 1537 aa13.73□□□□□ -0.21
SMARCAL1-207ENST00000430374 KDM2AQ9Y2K7 1162 aa13.72□□□□□ -0.21
SMARCAL1-207ENST00000430374 AMOTL2Q9Y2J4 779 aa13.71□□□□□ -0.21
SMARCAL1-207ENST00000430374 SETD1AO15047 1707 aaKnown RBP13.7□□□□□ -0.22
SMARCAL1-207ENST00000430374 CFAP70Q5T0N1 1121 aa13.7□□□□□ -0.22
SMARCAL1-207ENST00000430374 STRCP1A6NGW2 1772 aa13.7□□□□□ -0.22
SMARCAL1-207ENST00000430374 CCER1Q8TC90 406 aaPredicted RBP13.69□□□□□ -0.22
SMARCAL1-207ENST00000430374 TECPR2O15040 1411 aa13.69□□□□□ -0.22
SMARCAL1-207ENST00000430374 PTCH1Q13635 1447 aa13.69□□□□□ -0.22
SMARCAL1-207ENST00000430374 NCOA3Q9Y6Q9 1424 aa13.69□□□□□ -0.22
SMARCAL1-207ENST00000430374 LRPPRCP42704 1394 aaKnown RBP13.69□□□□□ -0.22
SMARCAL1-207ENST00000430374 TMEM94Q12767 1356 aa13.69□□□□□ -0.22
SMARCAL1-207ENST00000430374 TONSLQ96HA7 1378 aa13.69□□□□□ -0.22
SMARCAL1-207ENST00000430374 ASXL1Q8IXJ9 1541 aa13.69□□□□□ -0.22
SMARCAL1-207ENST00000430374 XRN1Q8IZH2 1706 aaKnown RBP13.68□□□□□ -0.22
SMARCAL1-207ENST00000430374 ABCC11Q96J66 1382 aa13.68□□□□□ -0.22
SMARCAL1-207ENST00000430374 LAMC1P11047 1609 aa13.68□□□□□ -0.22
SMARCAL1-207ENST00000430374 ADGRB1O14514 1584 aa13.67□□□□□ -0.22
SMARCAL1-207ENST00000430374 PROSER2Q86WR7 435 aaPredicted RBP13.67□□□□□ -0.22
SMARCAL1-207ENST00000430374 TIMELESSQ9UNS1 1208 aa13.67□□□□□ -0.22
SMARCAL1-207ENST00000430374 CHD2O14647 1828 aaKnown RBP13.67□□□□□ -0.22
SMARCAL1-207ENST00000430374 YTHDC2Q9H6S0 1430 aaKnown RBP13.66□□□□□ -0.22
SMARCAL1-207ENST00000430374 TMEM132EQ6IEE7 984 aa13.66□□□□□ -0.22
SMARCAL1-207ENST00000430374 ROBO2Q9HCK4 1378 aa13.66□□□□□ -0.22
SMARCAL1-207ENST00000430374 SIRT1Q96EB6 747 aa13.65□□□□□ -0.22
SMARCAL1-207ENST00000430374 RBM33Q96EV2 1170 aaKnown RBP13.63□□□□□ -0.23
SMARCAL1-207ENST00000430374 FAM135BQ49AJ0 1406 aa13.63□□□□□ -0.23
SMARCAL1-207ENST00000430374 NBPF8Q3BBV2 869 aa13.62□□□□□ -0.23
SMARCAL1-207ENST00000430374 STK26Q9P289 416 aa13.62□□□□□ -0.23
SMARCAL1-207ENST00000430374 MSH6P52701 1360 aa13.61□□□□□ -0.23
SMARCAL1-207ENST00000430374 DLC1Q96QB1 1528 aa13.61□□□□□ -0.23
SMARCAL1-207ENST00000430374 NBPF1Q3BBV0 1214 aa13.61□□□□□ -0.23
SMARCAL1-207ENST00000430374 FBXO41Q8TF61 875 aa13.61□□□□□ -0.23
SMARCAL1-207ENST00000430374 C19orf44Q9H6X5 657 aa13.61□□□□□ -0.23
SMARCAL1-207ENST00000430374 DCCP43146 1447 aa13.6□□□□□ -0.23
SMARCAL1-207ENST00000430374 ADGRL3Q9HAR2 1447 aa13.6□□□□□ -0.23
SMARCAL1-207ENST00000430374 KIAA1210Q9ULL0 1709 aa13.6□□□□□ -0.23
SMARCAL1-207ENST00000430374 GPRASP1Q5JY77 1395 aa13.59□□□□□ -0.23
SMARCAL1-207ENST00000430374 TOM1O60784 492 aa13.59□□□□□ -0.23
SMARCAL1-207ENST00000430374 KNDC1Q76NI1 1749 aa13.59□□□□□ -0.23
SMARCAL1-207ENST00000430374 UBAP1LF5GYI3 381 aa13.58□□□□□ -0.24
SMARCAL1-207ENST00000430374 WAPLQ7Z5K2 1190 aa13.58□□□□□ -0.24
SMARCAL1-207ENST00000430374 C14orf37Q86TY3 774 aa13.58□□□□□ -0.24
SMARCAL1-207ENST00000430374 TRAK1Q9UPV9 953 aa13.58□□□□□ -0.24
SMARCAL1-207ENST00000430374 ROCK2O75116 1388 aaKnown RBP13.58□□□□□ -0.24
SMARCAL1-207ENST00000430374 PLEKHH1Q9ULM0 1364 aa13.58□□□□□ -0.24
SMARCAL1-207ENST00000430374 RALGAPBQ86X10 1494 aa13.57□□□□□ -0.24
SMARCAL1-207ENST00000430374 CADPS2Q86UW7 1296 aa13.57□□□□□ -0.24
SMARCAL1-207ENST00000430374 PRAM1Q96QH2 718 aa13.57□□□□□ -0.24
SMARCAL1-207ENST00000430374 XIRP1Q702N8 1843 aaKnown RBP13.57□□□□□ -0.24
SMARCAL1-207ENST00000430374 TRPM1Q7Z4N2 1603 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms