RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 SYAP1Q96A49 352 aaPredicted RBP7.33□□□□□ -1.24
UBR3-204ENST00000430321 ANKRD50Q9ULJ7 1429 aa7.33□□□□□ -1.24
UBR3-204ENST00000430321 DENND4BO75064 1496 aaPredicted RBP7.33□□□□□ -1.24
UBR3-204ENST00000430321 CCDC141Q6ZP82 1450 aa7.33□□□□□ -1.24
UBR3-204ENST00000430321 WDR97A6NE52 1622 aa7.33□□□□□ -1.24
UBR3-204ENST00000430321 KIF14Q15058 1648 aa7.33□□□□□ -1.24
UBR3-204ENST00000430321 TOM1O60784 492 aa7.33□□□□□ -1.24
UBR3-204ENST00000430321 TPM2P07951 284 aa7.33□□□□□ -1.24
UBR3-204ENST00000430321 API5Q9BZZ5 524 aaKnown RBP7.33□□□□□ -1.24
UBR3-204ENST00000430321 RAB3GAP2Q9H2M9 1393 aa7.33□□□□□ -1.24
UBR3-204ENST00000430321 WWC2Q6AWC2 1192 aa7.33□□□□□ -1.24
UBR3-204ENST00000430321 POLA1P09884 1462 aaPredicted RBP7.33□□□□□ -1.24
UBR3-204ENST00000430321 DIAPH1O60610 1272 aaKnown RBP7.33□□□□□ -1.24
UBR3-204ENST00000430321 GNL3LQ9NVN8 582 aaKnown RBP7.33□□□□□ -1.24
UBR3-204ENST00000430321 PTMAP06454 111 aaKnown RBP7.32□□□□□ -1.24
UBR3-204ENST00000430321 SLC3A2P08195 630 aaKnown RBP7.32□□□□□ -1.24
UBR3-204ENST00000430321 CEP89Q96ST8 783 aa7.32□□□□□ -1.24
UBR3-204ENST00000430321 TRAK1Q9UPV9 953 aa7.32□□□□□ -1.24
UBR3-204ENST00000430321 HSPA5P11021 654 aaKnown RBP7.32□□□□□ -1.24
UBR3-204ENST00000430321 FGD6Q6ZV73 1430 aa7.32□□□□□ -1.24
UBR3-204ENST00000430321 CNTLNQ9NXG0 1405 aa7.31□□□□□ -1.24
UBR3-204ENST00000430321 ATAD2Q6PL18 1390 aa7.31□□□□□ -1.24
UBR3-204ENST00000430321 PPP4R2Q9NY27 417 aa7.31□□□□□ -1.24
UBR3-204ENST00000430321 TULP1O00294 542 aaPredicted RBP7.3□□□□□ -1.24
UBR3-204ENST00000430321 GNAI1P63096 354 aa7.3□□□□□ -1.24
UBR3-204ENST00000430321 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.3□□□□□ -1.243e-7■■■■□ 23.6
UBR3-204ENST00000430321 LTV1Q96GA3 475 aaPredicted RBP7.3□□□□□ -1.24
UBR3-204ENST00000430321 FANCAO15360 1455 aa7.3□□□□□ -1.24
UBR3-204ENST00000430321 MYBBP1AQ9BQG0 1328 aaKnown RBP7.3□□□□□ -1.24
UBR3-204ENST00000430321 CCAR1Q8IX12 1150 aaKnown RBP7.3□□□□□ -1.24
UBR3-204ENST00000430321 DNAI2Q9GZS0 605 aa7.3□□□□□ -1.24
UBR3-204ENST00000430321 KIF16BQ96L93 1317 aa7.3□□□□□ -1.24
UBR3-204ENST00000430321 GRIN2AQ12879 1464 aa7.3□□□□□ -1.24
UBR3-204ENST00000430321 TCERG1O14776 1098 aaKnown RBP7.3□□□□□ -1.24
UBR3-204ENST00000430321 NLRP2Q9NX02 1062 aa7.3□□□□□ -1.24
UBR3-204ENST00000430321 ZNF652Q9Y2D9 606 aa7.3□□□□□ -1.24
UBR3-204ENST00000430321 ERICH2A1L162 156 aa7.29□□□□□ -1.24
UBR3-204ENST00000430321 SUPT6HQ7KZ85 1726 aaKnown RBP7.29□□□□□ -1.24
UBR3-204ENST00000430321 ITPRIPQ8IWB1 547 aa7.29□□□□□ -1.24
UBR3-204ENST00000430321 RASSF8Q8NHQ8 419 aa7.29□□□□□ -1.24
UBR3-204ENST00000430321 GLIPR1L2Q4G1C9 344 aa7.29□□□□□ -1.24
UBR3-204ENST00000430321 ESCO1Q5FWF5 840 aa7.29□□□□□ -1.24
UBR3-204ENST00000430321 MINK1Q8N4C8 1332 aaPredicted RBP7.29□□□□□ -1.24
UBR3-204ENST00000430321 C9orf84Q5VXU9 1444 aa7.29□□□□□ -1.24
UBR3-204ENST00000430321 KLHL34Q8N239 644 aa7.29□□□□□ -1.24
UBR3-204ENST00000430321 SYTL4Q96C24 671 aaPredicted RBP7.29□□□□□ -1.24
UBR3-204ENST00000430321 GTF3C3Q9Y5Q9 886 aa7.28□□□□□ -1.24
UBR3-204ENST00000430321 E9PSI1 815 aa7.28□□□□□ -1.24
UBR3-204ENST00000430321 CCDC43Q96MW1 224 aaKnown RBP7.28□□□□□ -1.24
UBR3-204ENST00000430321 C9orf78Q9NZ63 289 aaPredicted RBP7.28□□□□□ -1.24
UBR3-204ENST00000430321 A0A087WZG4 1122 aa7.28□□□□□ -1.24
UBR3-204ENST00000430321 HOOK1Q9UJC3 728 aaKnown RBP7.28□□□□□ -1.24
UBR3-204ENST00000430321 RNF20Q5VTR2 975 aa7.28□□□□□ -1.24
UBR3-204ENST00000430321 FAM135AQ9P2D6 1515 aa7.27□□□□□ -1.24
UBR3-204ENST00000430321 ERC2O15083 957 aa7.27□□□□□ -1.24
UBR3-204ENST00000430321 TRDNQ13061 729 aa7.27□□□□□ -1.24
UBR3-204ENST00000430321 VPS53Q5VIR6 699 aa7.27□□□□□ -1.24
UBR3-204ENST00000430321 ATP6V1DQ9Y5K8 247 aa7.27□□□□□ -1.24
UBR3-204ENST00000430321 ADGRL1O94910 1474 aa7.27□□□□□ -1.25
UBR3-204ENST00000430321 G3BP1Q13283 466 aaKnown RBP eCLIP7.27□□□□□ -1.25
UBR3-204ENST00000430321 TRIM29Q14134 588 aa7.27□□□□□ -1.25
UBR3-204ENST00000430321 PEG3Q9GZU2 1588 aa7.27□□□□□ -1.25
UBR3-204ENST00000430321 MSH6P52701 1360 aa7.27□□□□□ -1.25
UBR3-204ENST00000430321 ERC1Q8IUD2 1116 aa7.27□□□□□ -1.25
UBR3-204ENST00000430321 PPP1R1BQ9UD71 204 aaPredicted RBP7.27□□□□□ -1.25
UBR3-204ENST00000430321 GBP4Q96PP9 640 aa7.26□□□□□ -1.25
UBR3-204ENST00000430321 RTEL1-TNFRSF6BF6WH68 1400 aa7.26□□□□□ -1.25
UBR3-204ENST00000430321 LRRC9Q6ZRR7 1453 aa7.26□□□□□ -1.25
UBR3-204ENST00000430321 NLRP6P59044 892 aa7.26□□□□□ -1.25
UBR3-204ENST00000430321 TOMM22Q9NS69 142 aa7.26□□□□□ -1.25
UBR3-204ENST00000430321 TBC1D2BQ9UPU7 963 aa7.26□□□□□ -1.25
UBR3-204ENST00000430321 HIP1O00291 1037 aa7.26□□□□□ -1.25
UBR3-204ENST00000430321 SIN3AQ96ST3 1273 aa7.26□□□□□ -1.25
UBR3-204ENST00000430321 BRMS1Q9HCU9 246 aa7.26□□□□□ -1.25
UBR3-204ENST00000430321 TMOD2Q9NZR1 351 aa7.26□□□□□ -1.25
UBR3-204ENST00000430321 R3HCC1Q9Y3T6 440 aaKnown RBP7.26□□□□□ -1.25
UBR3-204ENST00000430321 CADPS2Q86UW7 1296 aa7.26□□□□□ -1.25
UBR3-204ENST00000430321 XBP1P17861 261 aa7.26□□□□□ -1.25
UBR3-204ENST00000430321 ABTB2Q8N961 1025 aa7.26□□□□□ -1.25
UBR3-204ENST00000430321 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.25□□□□□ -1.25
UBR3-204ENST00000430321 NINLQ9Y2I6 1382 aa7.25□□□□□ -1.25
UBR3-204ENST00000430321 PHF14O94880 888 aa7.25□□□□□ -1.25
UBR3-204ENST00000430321 CNKSR2Q8WXI2 1034 aa7.25□□□□□ -1.25
UBR3-204ENST00000430321 NBPF8Q3BBV2 869 aa7.25□□□□□ -1.25
UBR3-204ENST00000430321 NBPF14Q5TI25 921 aa7.25□□□□□ -1.25
UBR3-204ENST00000430321 TEX13AQ9BXU3 409 aaPredicted RBP7.25□□□□□ -1.25
UBR3-204ENST00000430321 NESP48681 1621 aa7.25□□□□□ -1.25
UBR3-204ENST00000430321 ST18O60284 1047 aa7.25□□□□□ -1.25
UBR3-204ENST00000430321 ZSCAN25Q6NSZ9 544 aa7.25□□□□□ -1.25
UBR3-204ENST00000430321 TOM1L2Q6ZVM7 507 aa7.25□□□□□ -1.25
UBR3-204ENST00000430321 FBXW7Q969H0 707 aa7.25□□□□□ -1.25
UBR3-204ENST00000430321 HSP90AB3PQ58FF7 597 aa7.24□□□□□ -1.25
UBR3-204ENST00000430321 NGLY1Q96IV0 654 aa7.24□□□□□ -1.25
UBR3-204ENST00000430321 PRDM11Q9NQV5 511 aa7.24□□□□□ -1.25
UBR3-204ENST00000430321 CCDC30Q5VVM6 783 aa7.24□□□□□ -1.25
UBR3-204ENST00000430321 IFIT2P09913 472 aaKnown RBP7.24□□□□□ -1.25
UBR3-204ENST00000430321 TRIM21P19474 475 aaKnown RBP7.24□□□□□ -1.25
UBR3-204ENST00000430321 SART3Q15020 963 aaKnown RBP7.24□□□□□ -1.25
UBR3-204ENST00000430321 SLF2Q8IX21 1173 aa7.24□□□□□ -1.25
UBR3-204ENST00000430321 TRIM6-TRIM34B2RNG4 842 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms