RNA–Protein interactions for RNA: ENST00000430081.5

OPTN-208, Transcript of optineurin, humanhuman

TSL 5

Gene OPTN, Length 848 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-208ENST00000430081 PTPN23Q9H3S7 1636 aa16.01■□□□□ 0.15
OPTN-208ENST00000430081 C14orf37Q86TY3 774 aa16.01■□□□□ 0.15
OPTN-208ENST00000430081 KDM5AP29375 1690 aaKnown RBP16■□□□□ 0.15
OPTN-208ENST00000430081 MEX3CQ5U5Q3 659 aaKnown RBP16■□□□□ 0.15
OPTN-208ENST00000430081 FGD6Q6ZV73 1430 aa16■□□□□ 0.15
OPTN-208ENST00000430081 ADGRB3O60242 1522 aa15.99■□□□□ 0.15
OPTN-208ENST00000430081 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.98■□□□□ 0.15
OPTN-208ENST00000430081 CROCC2H7BZ55 1655 aa15.98■□□□□ 0.15
OPTN-208ENST00000430081 PLEKHG1Q9ULL1 1385 aa15.98■□□□□ 0.15
OPTN-208ENST00000430081 CHGAP10645 457 aaKnown RBP15.97■□□□□ 0.15
OPTN-208ENST00000430081 TBX22Q9Y458 520 aa15.97■□□□□ 0.15
OPTN-208ENST00000430081 NWD1Q149M9 1564 aa15.96■□□□□ 0.15
OPTN-208ENST00000430081 RIMS2Q9UQ26 1411 aa15.96■□□□□ 0.15
OPTN-208ENST00000430081 ZNF772Q68DY9 489 aaPredicted RBP15.96■□□□□ 0.15
OPTN-208ENST00000430081 SPATA31A6Q5VVP1 1343 aa15.95■□□□□ 0.14
OPTN-208ENST00000430081 ATF3P18847 181 aa15.95■□□□□ 0.14
OPTN-208ENST00000430081 FAM50AQ14320 339 aaKnown RBP15.95■□□□□ 0.14
OPTN-208ENST00000430081 CADPS2Q86UW7 1296 aa15.95■□□□□ 0.14
OPTN-208ENST00000430081 NCOA3Q9Y6Q9 1424 aa15.94■□□□□ 0.14
OPTN-208ENST00000430081 RPRD2Q5VT52 1461 aaKnown RBP15.94■□□□□ 0.14
OPTN-208ENST00000430081 ZFYVE9O95405 1425 aa15.94■□□□□ 0.14
OPTN-208ENST00000430081 C19orf44Q9H6X5 657 aa15.93■□□□□ 0.14
OPTN-208ENST00000430081 ANKRD50Q9ULJ7 1429 aa15.93■□□□□ 0.14
OPTN-208ENST00000430081 PHLPP1O60346 1717 aa15.92■□□□□ 0.14
OPTN-208ENST00000430081 TRIM52Q96A61 297 aa15.92■□□□□ 0.14
OPTN-208ENST00000430081 NUTM2DQ5VT03 806 aaPredicted RBP15.91■□□□□ 0.14
OPTN-208ENST00000430081 ADGRL2O95490 1459 aa15.91■□□□□ 0.14
OPTN-208ENST00000430081 UPF1Q92900 1129 aaKnown RBP eCLIP15.9■□□□□ 0.14
OPTN-208ENST00000430081 RXRBP28702 533 aa15.89■□□□□ 0.13
OPTN-208ENST00000430081 PIK3R4Q99570 1358 aa15.88■□□□□ 0.13
OPTN-208ENST00000430081 NUTM2BA6NNL0 878 aaPredicted RBP15.87■□□□□ 0.13
OPTN-208ENST00000430081 NUTM2EB1AL46 878 aaPredicted RBP15.87■□□□□ 0.13
OPTN-208ENST00000430081 NUTM2AQ8IVF1 878 aaPredicted RBP15.87■□□□□ 0.13
OPTN-208ENST00000430081 LRP6O75581 1613 aa15.86■□□□□ 0.13
OPTN-208ENST00000430081 AMOTL2Q9Y2J4 779 aa15.86■□□□□ 0.13
OPTN-208ENST00000430081 COL16A1Q07092 1604 aaPredicted RBP15.86■□□□□ 0.13
OPTN-208ENST00000430081 BRINP3Q76B58 766 aa15.85■□□□□ 0.13
OPTN-208ENST00000430081 SETD1AO15047 1707 aaKnown RBP15.85■□□□□ 0.13
OPTN-208ENST00000430081 ADAMTS13Q76LX8 1427 aa15.85■□□□□ 0.13
OPTN-208ENST00000430081 CHD2O14647 1828 aaKnown RBP15.84■□□□□ 0.13
OPTN-208ENST00000430081 TMEM131LA2VDJ0 1609 aa15.84■□□□□ 0.13
OPTN-208ENST00000430081 DIP2AQ14689 1571 aa15.82■□□□□ 0.12
OPTN-208ENST00000430081 AHDC1Q5TGY3 1603 aaPredicted RBP15.82■□□□□ 0.12
OPTN-208ENST00000430081 GCC2Q8IWJ2 1684 aa15.81■□□□□ 0.12
OPTN-208ENST00000430081 AFF2P51816 1311 aa15.8■□□□□ 0.12
OPTN-208ENST00000430081 LRRC59Q96AG4 307 aaKnown RBP15.8■□□□□ 0.12
OPTN-208ENST00000430081 TRPM2O94759 1503 aa15.79■□□□□ 0.12
OPTN-208ENST00000430081 NUP155O75694 1391 aa15.78■□□□□ 0.12
OPTN-208ENST00000430081 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.78■□□□□ 0.12
OPTN-208ENST00000430081 ZNF326Q5BKZ1 582 aaKnown RBP15.78■□□□□ 0.12
OPTN-208ENST00000430081 DCCP43146 1447 aa15.77■□□□□ 0.12
OPTN-208ENST00000430081 PTPRUQ92729 1446 aa15.77■□□□□ 0.12
OPTN-208ENST00000430081 SHPRHQ149N8 1683 aa15.77■□□□□ 0.12
OPTN-208ENST00000430081 CDK12Q9NYV4 1490 aaPredicted RBP15.77■□□□□ 0.11
OPTN-208ENST00000430081 C8orf37Q96NL8 207 aa15.76■□□□□ 0.11
OPTN-208ENST00000430081 QTRT2Q9H974 415 aaKnown RBP15.76■□□□□ 0.11
OPTN-208ENST00000430081 SETD5Q9C0A6 1442 aa15.76■□□□□ 0.11
OPTN-208ENST00000430081 ROCK1Q13464 1354 aa15.75■□□□□ 0.11
OPTN-208ENST00000430081 MYO5BQ9ULV0 1848 aa15.75■□□□□ 0.11
OPTN-208ENST00000430081 RBM6P78332 1123 aaKnown RBP15.75■□□□□ 0.11
OPTN-208ENST00000430081 UNC13BO14795 1591 aa15.75■□□□□ 0.11
OPTN-208ENST00000430081 ASXL1Q8IXJ9 1541 aa15.73■□□□□ 0.11
OPTN-208ENST00000430081 ITGAEP38570 1179 aa15.73■□□□□ 0.11
OPTN-208ENST00000430081 MST1RQ04912 1400 aa15.73■□□□□ 0.11
OPTN-208ENST00000430081 DDX17Q92841 729 aaKnown RBP15.72■□□□□ 0.11
OPTN-208ENST00000430081 NGLY1Q96IV0 654 aa15.72■□□□□ 0.11
OPTN-208ENST00000430081 E9PCH4 1651 aa15.72■□□□□ 0.11
OPTN-208ENST00000430081 ADAMTS2O95450 1211 aa15.7■□□□□ 0.1
OPTN-208ENST00000430081 METP08581 1390 aa15.7■□□□□ 0.1
OPTN-208ENST00000430081 IQGAP3Q86VI3 1631 aa15.69■□□□□ 0.1
OPTN-208ENST00000430081 PNPLA6Q8IY17 1366 aa15.69■□□□□ 0.1
OPTN-208ENST00000430081 FOXD1Q16676 465 aa15.68■□□□□ 0.1
OPTN-208ENST00000430081 RGS12O14924 1447 aa15.68■□□□□ 0.1
OPTN-208ENST00000430081 ADGRL3Q9HAR2 1447 aa15.68■□□□□ 0.1
OPTN-208ENST00000430081 SETBP1Q9Y6X0 1596 aa15.67■□□□□ 0.1
OPTN-208ENST00000430081 USP21Q9UK80 565 aa15.66■□□□□ 0.1
OPTN-208ENST00000430081 TRPC5Q9UL62 973 aaPredicted RBP15.65■□□□□ 0.1
OPTN-208ENST00000430081 XRN1Q8IZH2 1706 aaKnown RBP15.65■□□□□ 0.1
OPTN-208ENST00000430081 ATAD2Q6PL18 1390 aa15.64■□□□□ 0.09
OPTN-208ENST00000430081 C1orf167Q5SNV9 1468 aa15.64■□□□□ 0.09
OPTN-208ENST00000430081 NHSL1Q5SYE7 1610 aa15.63■□□□□ 0.09
OPTN-208ENST00000430081 NRXN3Q9Y4C0 1643 aa15.63■□□□□ 0.09
OPTN-208ENST00000430081 VGFO15240 615 aaPredicted RBP15.62■□□□□ 0.09
OPTN-208ENST00000430081 ORAI2Q96SN7 254 aa15.62■□□□□ 0.09
OPTN-208ENST00000430081 SOS2Q07890 1332 aaPredicted RBP15.62■□□□□ 0.09
OPTN-208ENST00000430081 FNBP4Q8N3X1 1017 aaPredicted RBP15.6■□□□□ 0.09
OPTN-208ENST00000430081 ZRANB1Q9UGI0 708 aa15.6■□□□□ 0.09
OPTN-208ENST00000430081 PTCH1Q13635 1447 aa15.59■□□□□ 0.09
OPTN-208ENST00000430081 ROBO2Q9HCK4 1378 aa15.57■□□□□ 0.08
OPTN-208ENST00000430081 NEXMIFQ5QGS0 1516 aa15.57■□□□□ 0.08
OPTN-208ENST00000430081 ESCO1Q5FWF5 840 aa15.56■□□□□ 0.08
OPTN-208ENST00000430081 CCDC125Q86Z20 511 aa15.56■□□□□ 0.08
OPTN-208ENST00000430081 SPHKAPQ2M3C7 1700 aa15.56■□□□□ 0.08
OPTN-208ENST00000430081 RPGRIP1LQ68CZ1 1315 aa15.55■□□□□ 0.08
OPTN-208ENST00000430081 NPHP3Q7Z494 1330 aa15.55■□□□□ 0.08
OPTN-208ENST00000430081 PPARGC1BQ86YN6 1023 aaKnown RBP15.55■□□□□ 0.08
OPTN-208ENST00000430081 ATRNO75882 1429 aa15.54■□□□□ 0.08
OPTN-208ENST00000430081 NALCNQ8IZF0 1738 aa15.54■□□□□ 0.08
OPTN-208ENST00000430081 HFM1A2PYH4 1435 aa15.53■□□□□ 0.08
OPTN-208ENST00000430081 CLTCL1P53675 1640 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms