RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 MYOM1P52179 1685 aa18.97■□□□□ 0.63
RBM39-212ENST00000429968 PANK3Q9H999 370 aa18.97■□□□□ 0.63
RBM39-212ENST00000429968 SIGLEC1Q9BZZ2 1709 aa18.97■□□□□ 0.63
RBM39-212ENST00000429968 ADGRF5Q8IZF2 1346 aa18.96■□□□□ 0.63
RBM39-212ENST00000429968 RALBP1Q15311 655 aa18.96■□□□□ 0.63
RBM39-212ENST00000429968 SCAF11Q99590 1463 aaKnown RBP18.96■□□□□ 0.63
RBM39-212ENST00000429968 BRD4O60885 1362 aaPredicted RBP18.96■□□□□ 0.62
RBM39-212ENST00000429968 RICTORQ6R327 1708 aa18.95■□□□□ 0.62
RBM39-212ENST00000429968 NPATQ14207 1427 aa18.95■□□□□ 0.62
RBM39-212ENST00000429968 TMF1P82094 1093 aa18.95■□□□□ 0.62
RBM39-212ENST00000429968 CC2D1BQ5T0F9 858 aaKnown RBP18.95■□□□□ 0.62
RBM39-212ENST00000429968 KTN1Q86UP2 1357 aaKnown RBP18.94■□□□□ 0.62
RBM39-212ENST00000429968 DIP2CQ9Y2E4 1556 aa18.93■□□□□ 0.62
RBM39-212ENST00000429968 ADGRB3O60242 1522 aa18.93■□□□□ 0.62
RBM39-212ENST00000429968 MYOM2P54296 1465 aa18.93■□□□□ 0.62
RBM39-212ENST00000429968 CFAP70Q5T0N1 1121 aa18.93■□□□□ 0.62
RBM39-212ENST00000429968 GGT6Q6P531 493 aa18.93■□□□□ 0.62
RBM39-212ENST00000429968 ABCC3O15438 1527 aa18.92■□□□□ 0.62
RBM39-212ENST00000429968 PPLO60437 1756 aa18.91■□□□□ 0.62
RBM39-212ENST00000429968 CAMSAP1Q5T5Y3 1602 aa18.91■□□□□ 0.62
RBM39-212ENST00000429968 SMG6Q86US8 1419 aaKnown RBP18.91■□□□□ 0.62
RBM39-212ENST00000429968 NEO1Q92859 1461 aa18.9■□□□□ 0.62
RBM39-212ENST00000429968 NRXN1Q9ULB1 1477 aa18.89■□□□□ 0.61
RBM39-212ENST00000429968 NLRP13Q86W25 1043 aa18.89■□□□□ 0.61
RBM39-212ENST00000429968 NOS1P29475 1434 aa18.88■□□□□ 0.61
RBM39-212ENST00000429968 SYNMO15061 1565 aa18.88■□□□□ 0.61
RBM39-212ENST00000429968 CYB5RLQ6IPT4 315 aa18.87■□□□□ 0.61
RBM39-212ENST00000429968 YEATS2Q9ULM3 1422 aa18.86■□□□□ 0.61
RBM39-212ENST00000429968 KDM5AP29375 1690 aaKnown RBP18.86■□□□□ 0.61
RBM39-212ENST00000429968 RIMBP3CA6NJZ7 1639 aa18.86■□□□□ 0.61
RBM39-212ENST00000429968 RIMBP3BA6NNM3 1639 aa18.86■□□□□ 0.61
RBM39-212ENST00000429968 RIMBP3Q9UFD9 1639 aa18.86■□□□□ 0.61
RBM39-212ENST00000429968 NUDCQ9Y266 331 aa18.86■□□□□ 0.61
RBM39-212ENST00000429968 STAC3Q96MF2 364 aa18.85■□□□□ 0.61
RBM39-212ENST00000429968 CHGAP10645 457 aaKnown RBP18.85■□□□□ 0.61
RBM39-212ENST00000429968 AMER1Q5JTC6 1135 aaPredicted RBP18.85■□□□□ 0.61
RBM39-212ENST00000429968 ERVK-7P63135 1459 aa18.84■□□□□ 0.61
RBM39-212ENST00000429968 MYO3AQ8NEV4 1616 aa18.83■□□□□ 0.61
RBM39-212ENST00000429968 WASHC2CQ9Y4E1 1318 aa18.83■□□□□ 0.6
RBM39-212ENST00000429968 PIK3C2BO00750 1634 aa18.83■□□□□ 0.6
RBM39-212ENST00000429968 TSPOAP1O95153 1857 aa18.82■□□□□ 0.6
RBM39-212ENST00000429968 ZC3H13Q5T200 1668 aaKnown RBP18.82■□□□□ 0.6
RBM39-212ENST00000429968 SALL2Q9Y467 1007 aaPredicted RBP18.82■□□□□ 0.6
RBM39-212ENST00000429968 MYO5BQ9ULV0 1848 aa18.81■□□□□ 0.6
RBM39-212ENST00000429968 PIK3C2GO75747 1445 aa18.8■□□□□ 0.6
RBM39-212ENST00000429968 EIF3AQ14152 1382 aaKnown RBP18.79■□□□□ 0.6
RBM39-212ENST00000429968 ADGRB1O14514 1584 aa18.79■□□□□ 0.6
RBM39-212ENST00000429968 GLI2P10070 1586 aa18.79■□□□□ 0.6
RBM39-212ENST00000429968 SETBP1Q9Y6X0 1596 aa18.79■□□□□ 0.6
RBM39-212ENST00000429968 DIP2BQ9P265 1576 aa18.78■□□□□ 0.6
RBM39-212ENST00000429968 ASXL1Q8IXJ9 1541 aa18.78■□□□□ 0.6
RBM39-212ENST00000429968 RNF123Q5XPI4 1314 aa18.78■□□□□ 0.6
RBM39-212ENST00000429968 QRICH2Q9H0J4 1663 aa18.78■□□□□ 0.6
RBM39-212ENST00000429968 NUTM2DQ5VT03 806 aaPredicted RBP18.77■□□□□ 0.6
RBM39-212ENST00000429968 B4GALNT3Q6L9W6 998 aa18.77■□□□□ 0.6
RBM39-212ENST00000429968 BLMP54132 1417 aaPredicted RBP18.77■□□□□ 0.6
RBM39-212ENST00000429968 PPP4R2Q9NY27 417 aa18.76■□□□□ 0.59
RBM39-212ENST00000429968 NEXMIFQ5QGS0 1516 aa18.76■□□□□ 0.59
RBM39-212ENST00000429968 PPP2R1AP30153 589 aa18.75■□□□□ 0.59
RBM39-212ENST00000429968 TMEM132EQ6IEE7 984 aa18.75■□□□□ 0.59
RBM39-212ENST00000429968 KNSTRNQ9Y448 316 aa18.75■□□□□ 0.59
RBM39-212ENST00000429968 ERICH6BQ5W0A0 696 aa18.74■□□□□ 0.59
RBM39-212ENST00000429968 BCL11AQ9H165 835 aa18.74■□□□□ 0.59
RBM39-212ENST00000429968 PREX1Q8TCU6 1659 aa18.73■□□□□ 0.59
RBM39-212ENST00000429968 CDCA7LQ96GN5 454 aa18.73■□□□□ 0.59
RBM39-212ENST00000429968 C14orf93Q9H972 538 aaKnown RBP18.73■□□□□ 0.59
RBM39-212ENST00000429968 TRAK1Q9UPV9 953 aa18.73■□□□□ 0.59
RBM39-212ENST00000429968 CDCA8Q53HL2 280 aa18.72■□□□□ 0.59
RBM39-212ENST00000429968 CARD14Q9BXL6 1004 aa18.72■□□□□ 0.59
RBM39-212ENST00000429968 ARHGEF28Q8N1W1 1705 aaKnown RBP18.71■□□□□ 0.59
RBM39-212ENST00000429968 FAM69CQ0P6D2 419 aa18.71■□□□□ 0.59
RBM39-212ENST00000429968 SENP3Q9H4L4 574 aaPredicted RBP18.71■□□□□ 0.59
RBM39-212ENST00000429968 ADAMTS8Q9UP79 889 aa18.7■□□□□ 0.58
RBM39-212ENST00000429968 ZMYM4Q5VZL5 1548 aa18.7■□□□□ 0.58
RBM39-212ENST00000429968 ARHGAP31Q2M1Z3 1444 aa18.69■□□□□ 0.58
RBM39-212ENST00000429968 IDI1Q13907 227 aa18.69■□□□□ 0.58
RBM39-212ENST00000429968 RBM19Q9Y4C8 960 aaKnown RBP18.69■□□□□ 0.58
RBM39-212ENST00000429968 CENPJQ9HC77 1338 aaPredicted RBP18.69■□□□□ 0.58
RBM39-212ENST00000429968 SBNO2Q9Y2G9 1366 aa18.68■□□□□ 0.58
RBM39-212ENST00000429968 TMEM131LA2VDJ0 1609 aa18.67■□□□□ 0.58
RBM39-212ENST00000429968 NPC1L1Q9UHC9 1359 aa18.65■□□□□ 0.58
RBM39-212ENST00000429968 INSRP06213 1382 aa18.65■□□□□ 0.58
RBM39-212ENST00000429968 RPGRIP1LQ68CZ1 1315 aa18.65■□□□□ 0.58
RBM39-212ENST00000429968 FBXO31Q5XUX0 539 aaPredicted RBP18.64■□□□□ 0.57
RBM39-212ENST00000429968 TULP4Q9NRJ4 1543 aa18.63■□□□□ 0.57
RBM39-212ENST00000429968 PLEKHH1Q9ULM0 1364 aa18.63■□□□□ 0.57
RBM39-212ENST00000429968 SLC12A5Q9H2X9 1139 aa18.62■□□□□ 0.57
RBM39-212ENST00000429968 KIF13AQ9H1H9 1805 aa18.62■□□□□ 0.57
RBM39-212ENST00000429968 CLTCQ00610 1675 aaKnown RBP18.61■□□□□ 0.57
RBM39-212ENST00000429968 RRP1P56182 461 aaKnown RBP18.61■□□□□ 0.57
RBM39-212ENST00000429968 RCAN3Q9UKA8 241 aa18.61■□□□□ 0.57
RBM39-212ENST00000429968 NSD3Q9BZ95 1437 aa18.59■□□□□ 0.57
RBM39-212ENST00000429968 PDE3BQ13370 1112 aa18.59■□□□□ 0.57
RBM39-212ENST00000429968 SHPRHQ149N8 1683 aa18.57■□□□□ 0.56
RBM39-212ENST00000429968 VGFO15240 615 aaPredicted RBP18.57■□□□□ 0.56
RBM39-212ENST00000429968 WDR43Q15061 677 aaKnown RBP eCLIP18.57■□□□□ 0.563e-7■■□□□ 11.8
RBM39-212ENST00000429968 CCDC146Q8IYE0 955 aa18.57■□□□□ 0.56
RBM39-212ENST00000429968 SAFB2Q14151 953 aaKnown RBP eCLIP18.56■□□□□ 0.56
RBM39-212ENST00000429968 REREQ9P2R6 1566 aa18.55■□□□□ 0.56
RBM39-212ENST00000429968 EXOC6Q8TAG9 804 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms