RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 CLTCL1P53675 1640 aa21.82■■□□□ 1.08
GARNL3-204ENST00000429629 SCAF11Q99590 1463 aaKnown RBP21.82■■□□□ 1.08
GARNL3-204ENST00000429629 RIMS2Q9UQ26 1411 aa21.81■■□□□ 1.08
GARNL3-204ENST00000429629 VGFO15240 615 aaPredicted RBP21.81■■□□□ 1.08
GARNL3-204ENST00000429629 ZNF326Q5BKZ1 582 aaKnown RBP21.81■■□□□ 1.08
GARNL3-204ENST00000429629 CLSPNQ9HAW4 1339 aa21.79■■□□□ 1.08
GARNL3-204ENST00000429629 NPHP4O75161 1426 aaPredicted RBP21.78■■□□□ 1.08
GARNL3-204ENST00000429629 PLEKHG1Q9ULL1 1385 aa21.77■■□□□ 1.08
GARNL3-204ENST00000429629 STRCQ7RTU9 1775 aa21.75■■□□□ 1.07
GARNL3-204ENST00000429629 PPP1R15AO75807 674 aaPredicted RBP21.75■■□□□ 1.07
GARNL3-204ENST00000429629 RGL3Q3MIN7 710 aa21.75■■□□□ 1.07
GARNL3-204ENST00000429629 TBX22Q9Y458 520 aa21.74■■□□□ 1.07
GARNL3-204ENST00000429629 KIF1BO60333 1816 aa21.69■■□□□ 1.06
GARNL3-204ENST00000429629 NEXMIFQ5QGS0 1516 aa21.69■■□□□ 1.06
GARNL3-204ENST00000429629 SIN3AQ96ST3 1273 aa21.67■■□□□ 1.06
GARNL3-204ENST00000429629 NUTM2DQ5VT03 806 aaPredicted RBP21.66■■□□□ 1.06
GARNL3-204ENST00000429629 PIK3R4Q99570 1358 aa21.65■■□□□ 1.06
GARNL3-204ENST00000429629 BCANQ96GW7 911 aa21.65■■□□□ 1.06
GARNL3-204ENST00000429629 SLC26A8Q96RN1 970 aa21.64■■□□□ 1.05
GARNL3-204ENST00000429629 ADAMTS13Q76LX8 1427 aa21.63■■□□□ 1.05
GARNL3-204ENST00000429629 POLR1AO95602 1720 aaPredicted RBP21.63■■□□□ 1.05
GARNL3-204ENST00000429629 ADGRF5Q8IZF2 1346 aa21.63■■□□□ 1.05
GARNL3-204ENST00000429629 DCAF11Q8TEB1 546 aa21.63■■□□□ 1.05
GARNL3-204ENST00000429629 TIMELESSQ9UNS1 1208 aa21.63■■□□□ 1.05
GARNL3-204ENST00000429629 MYOM2P54296 1465 aa21.62■■□□□ 1.05
GARNL3-204ENST00000429629 IQGAP1P46940 1657 aa21.62■■□□□ 1.05
GARNL3-204ENST00000429629 SETBP1Q9Y6X0 1596 aa21.61■■□□□ 1.05
GARNL3-204ENST00000429629 NRXN1Q9ULB1 1477 aa21.61■■□□□ 1.05
GARNL3-204ENST00000429629 KCNA6P17658 529 aa21.61■■□□□ 1.05
GARNL3-204ENST00000429629 NEUROD1Q13562 356 aa21.61■■□□□ 1.05
GARNL3-204ENST00000429629 MYO5BQ9ULV0 1848 aa21.6■■□□□ 1.05
GARNL3-204ENST00000429629 C14orf93Q9H972 538 aaKnown RBP21.6■■□□□ 1.05
GARNL3-204ENST00000429629 CCER1Q8TC90 406 aaPredicted RBP21.59■■□□□ 1.05
GARNL3-204ENST00000429629 L3MBTL2Q969R5 705 aa21.59■■□□□ 1.05
GARNL3-204ENST00000429629 DIP2AQ14689 1571 aa21.58■■□□□ 1.05
GARNL3-204ENST00000429629 ZNF335Q9H4Z2 1342 aaPredicted RBP21.57■■□□□ 1.04
GARNL3-204ENST00000429629 PIK3C2GO75747 1445 aa21.57■■□□□ 1.04
GARNL3-204ENST00000429629 KDM2AQ9Y2K7 1162 aa21.56■■□□□ 1.04
GARNL3-204ENST00000429629 PPLO60437 1756 aa21.54■■□□□ 1.04
GARNL3-204ENST00000429629 METP08581 1390 aa21.52■■□□□ 1.04
GARNL3-204ENST00000429629 TONSLQ96HA7 1378 aa21.51■■□□□ 1.03
GARNL3-204ENST00000429629 CPS1P31327 1500 aa21.51■■□□□ 1.03
GARNL3-204ENST00000429629 AMOTL2Q9Y2J4 779 aa21.51■■□□□ 1.03
GARNL3-204ENST00000429629 LTBP4Q8N2S1 1624 aa21.51■■□□□ 1.03
GARNL3-204ENST00000429629 IFT172Q9UG01 1749 aa21.5■■□□□ 1.03
GARNL3-204ENST00000429629 ALKQ9UM73 1620 aa21.5■■□□□ 1.03
GARNL3-204ENST00000429629 NRXN3Q9Y4C0 1643 aa21.49■■□□□ 1.03
GARNL3-204ENST00000429629 CFAP70Q5T0N1 1121 aa21.49■■□□□ 1.03
GARNL3-204ENST00000429629 SIRT1Q96EB6 747 aa21.49■■□□□ 1.03
GARNL3-204ENST00000429629 PRAG1Q86YV5 1406 aa21.48■■□□□ 1.03
GARNL3-204ENST00000429629 CERKQ8TCT0 537 aa21.48■■□□□ 1.03
GARNL3-204ENST00000429629 NCOA3Q9Y6Q9 1424 aa21.47■■□□□ 1.03
GARNL3-204ENST00000429629 SENP3Q9H4L4 574 aaPredicted RBP21.47■■□□□ 1.03
GARNL3-204ENST00000429629 ABCC11Q96J66 1382 aa21.47■■□□□ 1.03
GARNL3-204ENST00000429629 NKTRP30414 1462 aaKnown RBP21.46■■□□□ 1.03
GARNL3-204ENST00000429629 PTPRUQ92729 1446 aa21.46■■□□□ 1.03
GARNL3-204ENST00000429629 IQSEC2Q5JU85 1478 aa21.45■■□□□ 1.03
GARNL3-204ENST00000429629 LRPPRCP42704 1394 aaKnown RBP21.45■■□□□ 1.02
GARNL3-204ENST00000429629 PROSER2Q86WR7 435 aaPredicted RBP21.44■■□□□ 1.02
GARNL3-204ENST00000429629 NWD1Q149M9 1564 aa21.44■■□□□ 1.02
GARNL3-204ENST00000429629 TECPR2O15040 1411 aa21.42■■□□□ 1.02
GARNL3-204ENST00000429629 TMEM132EQ6IEE7 984 aa21.42■■□□□ 1.02
GARNL3-204ENST00000429629 LRRC7Q96NW7 1537 aa21.41■■□□□ 1.02
GARNL3-204ENST00000429629 PTCH1Q13635 1447 aa21.39■■□□□ 1.02
GARNL3-204ENST00000429629 YTHDC2Q9H6S0 1430 aaKnown RBP21.39■■□□□ 1.02
GARNL3-204ENST00000429629 LAMC1P11047 1609 aa21.39■■□□□ 1.01
GARNL3-204ENST00000429629 TMEM94Q12767 1356 aa21.38■■□□□ 1.01
GARNL3-204ENST00000429629 NBPF8Q3BBV2 869 aa21.38■■□□□ 1.01
GARNL3-204ENST00000429629 CHD2O14647 1828 aaKnown RBP21.38■■□□□ 1.01
GARNL3-204ENST00000429629 SETD1AO15047 1707 aaKnown RBP21.37■■□□□ 1.01
GARNL3-204ENST00000429629 FAM135BQ49AJ0 1406 aa21.37■■□□□ 1.01
GARNL3-204ENST00000429629 ADGRB1O14514 1584 aa21.36■■□□□ 1.01
GARNL3-204ENST00000429629 NBPF1Q3BBV0 1214 aa21.36■■□□□ 1.01
GARNL3-204ENST00000429629 C19orf44Q9H6X5 657 aa21.36■■□□□ 1.01
GARNL3-204ENST00000429629 STK26Q9P289 416 aa21.35■■□□□ 1.01
GARNL3-204ENST00000429629 ROBO2Q9HCK4 1378 aa21.35■■□□□ 1.01
GARNL3-204ENST00000429629 XRN1Q8IZH2 1706 aaKnown RBP21.34■■□□□ 1.01
GARNL3-204ENST00000429629 GPRASP1Q5JY77 1395 aa21.34■■□□□ 1.01
GARNL3-204ENST00000429629 ASXL1Q8IXJ9 1541 aa21.34■■□□□ 1.01
GARNL3-204ENST00000429629 KIAA1210Q9ULL0 1709 aa21.32■■□□□ 1
GARNL3-204ENST00000429629 STRCP1A6NGW2 1772 aa21.32■■□□□ 1
GARNL3-204ENST00000429629 DLC1Q96QB1 1528 aa21.31■■□□□ 1
GARNL3-204ENST00000429629 TOM1O60784 492 aa21.3■■□□□ 1
GARNL3-204ENST00000429629 ROCK2O75116 1388 aaKnown RBP21.29■■□□□ 1
GARNL3-204ENST00000429629 MSH6P52701 1360 aa21.29■■□□□ 1
GARNL3-204ENST00000429629 TRAK1Q9UPV9 953 aa21.29■■□□□ 1
GARNL3-204ENST00000429629 WAPLQ7Z5K2 1190 aa21.28■■□□□ 1
GARNL3-204ENST00000429629 CADPS2Q86UW7 1296 aa21.28■■□□□ 1
GARNL3-204ENST00000429629 DCCP43146 1447 aa21.28■■□□□ 1
GARNL3-204ENST00000429629 PRAM1Q96QH2 718 aa21.27■■□□□ 1
GARNL3-204ENST00000429629 RALGAPBQ86X10 1494 aa21.26■□□□□ 0.99
GARNL3-204ENST00000429629 C14orf37Q86TY3 774 aa21.26■□□□□ 0.99
GARNL3-204ENST00000429629 RBM33Q96EV2 1170 aaKnown RBP21.26■□□□□ 0.99
GARNL3-204ENST00000429629 POGKQ9P215 609 aa21.26■□□□□ 0.99
GARNL3-204ENST00000429629 FBXO41Q8TF61 875 aa21.25■□□□□ 0.99
GARNL3-204ENST00000429629 CARD11Q9BXL7 1154 aa21.25■□□□□ 0.99
GARNL3-204ENST00000429629 ADGRL3Q9HAR2 1447 aa21.25■□□□□ 0.99
GARNL3-204ENST00000429629 ATF3P18847 181 aa21.24■□□□□ 0.99
GARNL3-204ENST00000429629 UBAP1LF5GYI3 381 aa21.23■□□□□ 0.99
GARNL3-204ENST00000429629 KNDC1Q76NI1 1749 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 286.1 ms