RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 TET3O43151 1660 aa20.21■□□□□ 0.83
HLA-F-219ENST00000429294 MSH6P52701 1360 aa20.2■□□□□ 0.82
HLA-F-219ENST00000429294 NKTRP30414 1462 aaKnown RBP20.19■□□□□ 0.82
HLA-F-219ENST00000429294 RBM33Q96EV2 1170 aaKnown RBP20.18■□□□□ 0.82
HLA-F-219ENST00000429294 CHGAP10645 457 aaKnown RBP20.17■□□□□ 0.82
HLA-F-219ENST00000429294 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.17■□□□□ 0.82
HLA-F-219ENST00000429294 PLEKHG1Q9ULL1 1385 aa20.16■□□□□ 0.82
HLA-F-219ENST00000429294 RIMS2Q9UQ26 1411 aa20.15■□□□□ 0.82
HLA-F-219ENST00000429294 NWD1Q149M9 1564 aa20.13■□□□□ 0.81
HLA-F-219ENST00000429294 ZFYVE9O95405 1425 aa20.13■□□□□ 0.81
HLA-F-219ENST00000429294 SLAIN2Q9P270 581 aa20.13■□□□□ 0.81
HLA-F-219ENST00000429294 ROBO1Q9Y6N7 1651 aa20.13■□□□□ 0.81
HLA-F-219ENST00000429294 C14orf37Q86TY3 774 aa20.12■□□□□ 0.81
HLA-F-219ENST00000429294 RGS17Q9UGC6 210 aaPredicted RBP20.12■□□□□ 0.81
HLA-F-219ENST00000429294 TBX22Q9Y458 520 aa20.12■□□□□ 0.81
HLA-F-219ENST00000429294 GCC2Q8IWJ2 1684 aa20.1■□□□□ 0.81
HLA-F-219ENST00000429294 ROCK1Q13464 1354 aa20.09■□□□□ 0.81
HLA-F-219ENST00000429294 TMEM131LA2VDJ0 1609 aa20.09■□□□□ 0.81
HLA-F-219ENST00000429294 MYO5BQ9ULV0 1848 aa20.09■□□□□ 0.81
HLA-F-219ENST00000429294 UNC13BO14795 1591 aa20.08■□□□□ 0.8
HLA-F-219ENST00000429294 NCOA3Q9Y6Q9 1424 aa20.07■□□□□ 0.8
HLA-F-219ENST00000429294 CHD2O14647 1828 aaKnown RBP20.06■□□□□ 0.8
HLA-F-219ENST00000429294 NUP155O75694 1391 aa20.06■□□□□ 0.8
HLA-F-219ENST00000429294 ITGAEP38570 1179 aa20.05■□□□□ 0.8
HLA-F-219ENST00000429294 NUTM2DQ5VT03 806 aaPredicted RBP20.05■□□□□ 0.8
HLA-F-219ENST00000429294 CADPS2Q86UW7 1296 aa20.05■□□□□ 0.8
HLA-F-219ENST00000429294 PIK3R4Q99570 1358 aa20.05■□□□□ 0.8
HLA-F-219ENST00000429294 JCADQ9P266 1359 aa20.05■□□□□ 0.8
HLA-F-219ENST00000429294 ATF3P18847 181 aa20.04■□□□□ 0.8
HLA-F-219ENST00000429294 POTEAQ6S8J7 498 aa20.03■□□□□ 0.8
HLA-F-219ENST00000429294 C19orf44Q9H6X5 657 aa20.03■□□□□ 0.8
HLA-F-219ENST00000429294 E9PCH4 1651 aa20.03■□□□□ 0.8
HLA-F-219ENST00000429294 PHLPP1O60346 1717 aa20.02■□□□□ 0.79
HLA-F-219ENST00000429294 IQGAP3Q86VI3 1631 aa20.02■□□□□ 0.79
HLA-F-219ENST00000429294 DIP2AQ14689 1571 aa20.01■□□□□ 0.79
HLA-F-219ENST00000429294 ADAMTS13Q76LX8 1427 aa20.01■□□□□ 0.79
HLA-F-219ENST00000429294 AMOTL2Q9Y2J4 779 aa19.98■□□□□ 0.79
HLA-F-219ENST00000429294 ZNF326Q5BKZ1 582 aaKnown RBP19.97■□□□□ 0.79
HLA-F-219ENST00000429294 MEX3CQ5U5Q3 659 aaKnown RBP19.97■□□□□ 0.79
HLA-F-219ENST00000429294 TRPM2O94759 1503 aa19.97■□□□□ 0.79
HLA-F-219ENST00000429294 SPATA31A6Q5VVP1 1343 aa19.96■□□□□ 0.79
HLA-F-219ENST00000429294 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.93■□□□□ 0.78
HLA-F-219ENST00000429294 COL16A1Q07092 1604 aaPredicted RBP19.92■□□□□ 0.78
HLA-F-219ENST00000429294 PPARGC1BQ86YN6 1023 aaKnown RBP19.92■□□□□ 0.78
HLA-F-219ENST00000429294 ZNF772Q68DY9 489 aaPredicted RBP19.91■□□□□ 0.78
HLA-F-219ENST00000429294 DCCP43146 1447 aa19.89■□□□□ 0.77
HLA-F-219ENST00000429294 AHDC1Q5TGY3 1603 aaPredicted RBP19.88■□□□□ 0.77
HLA-F-219ENST00000429294 PTPRUQ92729 1446 aa19.88■□□□□ 0.77
HLA-F-219ENST00000429294 BRINP3Q76B58 766 aa19.88■□□□□ 0.77
HLA-F-219ENST00000429294 SPHKAPQ2M3C7 1700 aa19.87■□□□□ 0.77
HLA-F-219ENST00000429294 SETBP1Q9Y6X0 1596 aa19.86■□□□□ 0.77
HLA-F-219ENST00000429294 LRP6O75581 1613 aa19.84■□□□□ 0.77
HLA-F-219ENST00000429294 NUTM2BA6NNL0 878 aaPredicted RBP19.83■□□□□ 0.77
HLA-F-219ENST00000429294 NUTM2EB1AL46 878 aaPredicted RBP19.83■□□□□ 0.77
HLA-F-219ENST00000429294 NUTM2AQ8IVF1 878 aaPredicted RBP19.83■□□□□ 0.77
HLA-F-219ENST00000429294 SHPRHQ149N8 1683 aa19.83■□□□□ 0.76
HLA-F-219ENST00000429294 METP08581 1390 aa19.83■□□□□ 0.76
HLA-F-219ENST00000429294 LRRC59Q96AG4 307 aaKnown RBP19.82■□□□□ 0.76
HLA-F-219ENST00000429294 XRN1Q8IZH2 1706 aaKnown RBP19.82■□□□□ 0.76
HLA-F-219ENST00000429294 NRXN3Q9Y4C0 1643 aa19.81■□□□□ 0.76
HLA-F-219ENST00000429294 RXRBP28702 533 aa19.8■□□□□ 0.76
HLA-F-219ENST00000429294 TRIM52Q96A61 297 aa19.8■□□□□ 0.76
HLA-F-219ENST00000429294 ASXL1Q8IXJ9 1541 aa19.8■□□□□ 0.76
HLA-F-219ENST00000429294 MST1RQ04912 1400 aa19.79■□□□□ 0.76
HLA-F-219ENST00000429294 VGFO15240 615 aaPredicted RBP19.79■□□□□ 0.76
HLA-F-219ENST00000429294 SETD5Q9C0A6 1442 aa19.78■□□□□ 0.76
HLA-F-219ENST00000429294 ADGRL3Q9HAR2 1447 aa19.78■□□□□ 0.76
HLA-F-219ENST00000429294 SETD1AO15047 1707 aaKnown RBP19.78■□□□□ 0.76
HLA-F-219ENST00000429294 CLTCL1P53675 1640 aa19.76■□□□□ 0.75
HLA-F-219ENST00000429294 KIF1BO60333 1816 aa19.76■□□□□ 0.75
HLA-F-219ENST00000429294 NEXMIFQ5QGS0 1516 aa19.76■□□□□ 0.75
HLA-F-219ENST00000429294 NAIPQ13075 1403 aa19.76■□□□□ 0.75
HLA-F-219ENST00000429294 RRBP1Q9P2E9 1410 aaKnown RBP19.76■□□□□ 0.75
HLA-F-219ENST00000429294 AFF2P51816 1311 aa19.74■□□□□ 0.75
HLA-F-219ENST00000429294 RPGRIP1LQ68CZ1 1315 aa19.74■□□□□ 0.75
HLA-F-219ENST00000429294 SLC4A1APQ9BWU0 796 aaKnown RBP19.73■□□□□ 0.75
HLA-F-219ENST00000429294 UPF1Q92900 1129 aaKnown RBP eCLIP19.72■□□□□ 0.75
HLA-F-219ENST00000429294 C8orf37Q96NL8 207 aa19.72■□□□□ 0.75
HLA-F-219ENST00000429294 NHSL1Q5SYE7 1610 aa19.72■□□□□ 0.75
HLA-F-219ENST00000429294 DDX17Q92841 729 aaKnown RBP19.71■□□□□ 0.75
HLA-F-219ENST00000429294 PTCH1Q13635 1447 aa19.7■□□□□ 0.74
HLA-F-219ENST00000429294 C1orf167Q5SNV9 1468 aa19.69■□□□□ 0.74
HLA-F-219ENST00000429294 CDK12Q9NYV4 1490 aaPredicted RBP19.69■□□□□ 0.74
HLA-F-219ENST00000429294 PNPLA6Q8IY17 1366 aa19.69■□□□□ 0.74
HLA-F-219ENST00000429294 QTRT2Q9H974 415 aaKnown RBP19.68■□□□□ 0.74
HLA-F-219ENST00000429294 NALCNQ8IZF0 1738 aa19.68■□□□□ 0.74
HLA-F-219ENST00000429294 HFM1A2PYH4 1435 aa19.68■□□□□ 0.74
HLA-F-219ENST00000429294 RBM6P78332 1123 aaKnown RBP19.67■□□□□ 0.74
HLA-F-219ENST00000429294 NGLY1Q96IV0 654 aa19.67■□□□□ 0.74
HLA-F-219ENST00000429294 ROBO2Q9HCK4 1378 aa19.66■□□□□ 0.74
HLA-F-219ENST00000429294 ADAMTS2O95450 1211 aa19.65■□□□□ 0.74
HLA-F-219ENST00000429294 ORAI2Q96SN7 254 aa19.64■□□□□ 0.73
HLA-F-219ENST00000429294 SOS2Q07890 1332 aaPredicted RBP19.63■□□□□ 0.73
HLA-F-219ENST00000429294 PRAG1Q86YV5 1406 aa19.61■□□□□ 0.73
HLA-F-219ENST00000429294 NPHP3Q7Z494 1330 aa19.59■□□□□ 0.73
HLA-F-219ENST00000429294 ESCO1Q5FWF5 840 aa19.59■□□□□ 0.73
HLA-F-219ENST00000429294 CCDC144AA2RUR9 1427 aa19.59■□□□□ 0.73
HLA-F-219ENST00000429294 PPLO60437 1756 aa19.58■□□□□ 0.73
HLA-F-219ENST00000429294 RGL3Q3MIN7 710 aa19.58■□□□□ 0.72
HLA-F-219ENST00000429294 USP21Q9UK80 565 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms