RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 EIF3AQ14152 1382 aaKnown RBP27.07■■□□□ 1.92
CASC4-203ENST00000429162 NOS1P29475 1434 aa27.07■■□□□ 1.92
CASC4-203ENST00000429162 SIGLEC1Q9BZZ2 1709 aa27.06■■□□□ 1.92
CASC4-203ENST00000429162 PIK3C2BO00750 1634 aa27.05■■□□□ 1.92
CASC4-203ENST00000429162 PPLO60437 1756 aa27.05■■□□□ 1.92
CASC4-203ENST00000429162 REREQ9P2R6 1566 aa27.04■■□□□ 1.92
CASC4-203ENST00000429162 SYNMO15061 1565 aa27.02■■□□□ 1.92
CASC4-203ENST00000429162 RALBP1Q15311 655 aa27■■□□□ 1.91
CASC4-203ENST00000429162 FAM9BQ8IZU0 186 aa27■■□□□ 1.91
CASC4-203ENST00000429162 CFAP65Q6ZU64 1925 aaKnown RBP27■■□□□ 1.91
CASC4-203ENST00000429162 ADGRF5Q8IZF2 1346 aa27■■□□□ 1.91
CASC4-203ENST00000429162 SETBP1Q9Y6X0 1596 aa27■■□□□ 1.91
CASC4-203ENST00000429162 SUPT16HQ9Y5B9 1047 aaKnown RBP26.99■■□□□ 1.91
CASC4-203ENST00000429162 RPGRIP1LQ68CZ1 1315 aa26.98■■□□□ 1.91
CASC4-203ENST00000429162 CHGAP10645 457 aaKnown RBP26.97■■□□□ 1.91
CASC4-203ENST00000429162 MYBBP1AQ9BQG0 1328 aaKnown RBP26.97■■□□□ 1.91
CASC4-203ENST00000429162 CDCA8Q53HL2 280 aa26.96■■□□□ 1.91
CASC4-203ENST00000429162 KIF13AQ9H1H9 1805 aa26.96■■□□□ 1.91
CASC4-203ENST00000429162 CNGB1Q14028 1251 aaPredicted RBP26.96■■□□□ 1.91
CASC4-203ENST00000429162 AGLP35573 1532 aa26.95■■□□□ 1.91
CASC4-203ENST00000429162 MYO3AQ8NEV4 1616 aa26.95■■□□□ 1.9
CASC4-203ENST00000429162 PIK3C2GO75747 1445 aa26.95■■□□□ 1.9
CASC4-203ENST00000429162 CFAP70Q5T0N1 1121 aa26.94■■□□□ 1.9
CASC4-203ENST00000429162 PREX1Q8TCU6 1659 aa26.94■■□□□ 1.9
CASC4-203ENST00000429162 BRD4O60885 1362 aaPredicted RBP26.94■■□□□ 1.9
CASC4-203ENST00000429162 PARD3Q8TEW0 1356 aa26.94■■□□□ 1.9
CASC4-203ENST00000429162 SLC24A1O60721 1099 aa26.92■■□□□ 1.9
CASC4-203ENST00000429162 ZBED9Q6R2W3 1325 aa26.92■■□□□ 1.9
CASC4-203ENST00000429162 KDM5AP29375 1690 aaKnown RBP26.91■■□□□ 1.9
CASC4-203ENST00000429162 PER1O15534 1290 aaPredicted RBP26.91■■□□□ 1.9
CASC4-203ENST00000429162 TMC1Q8TDI8 760 aa26.89■■□□□ 1.9
CASC4-203ENST00000429162 NEXMIFQ5QGS0 1516 aa26.89■■□□□ 1.9
CASC4-203ENST00000429162 ARHGEF40Q8TER5 1519 aa26.88■■□□□ 1.89
CASC4-203ENST00000429162 PANK3Q9H999 370 aa26.88■■□□□ 1.89
CASC4-203ENST00000429162 NEFLP07196 543 aa26.87■■□□□ 1.89
CASC4-203ENST00000429162 MYOM1P52179 1685 aa26.87■■□□□ 1.89
CASC4-203ENST00000429162 SLC52A1Q9NWF4 448 aa26.86■■□□□ 1.89
CASC4-203ENST00000429162 ADGRB1O14514 1584 aa26.85■■□□□ 1.89
CASC4-203ENST00000429162 SBNO2Q9Y2G9 1366 aa26.85■■□□□ 1.89
CASC4-203ENST00000429162 PPP6R1Q9UPN7 881 aa26.84■■□□□ 1.89
CASC4-203ENST00000429162 NLRP13Q86W25 1043 aa26.83■■□□□ 1.89
CASC4-203ENST00000429162 PNISRQ8TF01 805 aaKnown RBP26.83■■□□□ 1.89
CASC4-203ENST00000429162 C14orf93Q9H972 538 aaKnown RBP26.83■■□□□ 1.89
CASC4-203ENST00000429162 ERVK-7P63135 1459 aa26.82■■□□□ 1.88
CASC4-203ENST00000429162 TMEM131LA2VDJ0 1609 aa26.81■■□□□ 1.88
CASC4-203ENST00000429162 LRPPRCP42704 1394 aaKnown RBP26.8■■□□□ 1.88
CASC4-203ENST00000429162 ZFYVE9O95405 1425 aa26.79■■□□□ 1.88
CASC4-203ENST00000429162 VGFO15240 615 aaPredicted RBP26.79■■□□□ 1.88
CASC4-203ENST00000429162 CLTCQ00610 1675 aaKnown RBP26.79■■□□□ 1.88
CASC4-203ENST00000429162 IDI1Q13907 227 aa26.78■■□□□ 1.88
CASC4-203ENST00000429162 FKBP8Q14318 412 aa26.78■■□□□ 1.88
CASC4-203ENST00000429162 QRICH2Q9H0J4 1663 aa26.77■■□□□ 1.88
CASC4-203ENST00000429162 CENPJQ9HC77 1338 aaPredicted RBP26.76■■□□□ 1.87
CASC4-203ENST00000429162 MYO5BQ9ULV0 1848 aa26.76■■□□□ 1.87
CASC4-203ENST00000429162 ASXL1Q8IXJ9 1541 aa26.75■■□□□ 1.87
CASC4-203ENST00000429162 CC2D1BQ5T0F9 858 aaKnown RBP26.75■■□□□ 1.87
CASC4-203ENST00000429162 KNSTRNQ9Y448 316 aa26.74■■□□□ 1.87
CASC4-203ENST00000429162 SPATA31D1Q6ZQQ2 1576 aa26.71■■□□□ 1.87
CASC4-203ENST00000429162 ARHGEF28Q8N1W1 1705 aaKnown RBP26.7■■□□□ 1.86
CASC4-203ENST00000429162 PELP1Q8IZL8 1130 aaKnown RBP26.7■■□□□ 1.86
CASC4-203ENST00000429162 NPC1L1Q9UHC9 1359 aa26.7■■□□□ 1.86
CASC4-203ENST00000429162 TRAK1Q9UPV9 953 aa26.69■■□□□ 1.86
CASC4-203ENST00000429162 INSRP06213 1382 aa26.67■■□□□ 1.86
CASC4-203ENST00000429162 AMER1Q5JTC6 1135 aaPredicted RBP26.66■■□□□ 1.86
CASC4-203ENST00000429162 FBXO31Q5XUX0 539 aaPredicted RBP26.66■■□□□ 1.86
CASC4-203ENST00000429162 SMG6Q86US8 1419 aaKnown RBP26.66■■□□□ 1.86
CASC4-203ENST00000429162 TMEM132EQ6IEE7 984 aa26.65■■□□□ 1.86
CASC4-203ENST00000429162 NUTM2DQ5VT03 806 aaPredicted RBP26.63■■□□□ 1.85
CASC4-203ENST00000429162 BCANQ96GW7 911 aa26.59■■□□□ 1.85
CASC4-203ENST00000429162 MLECQ14165 292 aa26.58■■□□□ 1.85
CASC4-203ENST00000429162 BLMP54132 1417 aaPredicted RBP26.58■■□□□ 1.85
CASC4-203ENST00000429162 STAG3Q9UJ98 1225 aa26.57■■□□□ 1.84
CASC4-203ENST00000429162 NUDCQ9Y266 331 aa26.57■■□□□ 1.84
CASC4-203ENST00000429162 A2ML1A8K2U0 1454 aa26.57■■□□□ 1.84
CASC4-203ENST00000429162 PPP2R1AP30153 589 aa26.56■■□□□ 1.84
CASC4-203ENST00000429162 PUS7Q96PZ0 661 aaKnown RBP26.55■■□□□ 1.84
CASC4-203ENST00000429162 TULP4Q9NRJ4 1543 aa26.55■■□□□ 1.84
CASC4-203ENST00000429162 ESF1Q9H501 851 aaKnown RBP26.55■■□□□ 1.84
CASC4-203ENST00000429162 ALKQ9UM73 1620 aa26.53■■□□□ 1.84
CASC4-203ENST00000429162 ERICH6BQ5W0A0 696 aa26.53■■□□□ 1.84
CASC4-203ENST00000429162 EVC2Q86UK5 1308 aa26.53■■□□□ 1.84
CASC4-203ENST00000429162 USP32Q8NFA0 1604 aa26.52■■□□□ 1.84
CASC4-203ENST00000429162 PTPRMP28827 1452 aa26.5■■□□□ 1.83
CASC4-203ENST00000429162 YTHDC2Q9H6S0 1430 aaKnown RBP26.5■■□□□ 1.83
CASC4-203ENST00000429162 RIMS2Q9UQ26 1411 aa26.5■■□□□ 1.83
CASC4-203ENST00000429162 ZMYM3Q14202 1370 aa26.5■■□□□ 1.83
CASC4-203ENST00000429162 CARD14Q9BXL6 1004 aa26.49■■□□□ 1.83
CASC4-203ENST00000429162 NSD3Q9BZ95 1437 aa26.47■■□□□ 1.83
CASC4-203ENST00000429162 SETD1AO15047 1707 aaKnown RBP26.44■■□□□ 1.82
CASC4-203ENST00000429162 PDE3BQ13370 1112 aa26.44■■□□□ 1.82
CASC4-203ENST00000429162 WDR43Q15061 677 aaKnown RBP eCLIP26.43■■□□□ 1.82
CASC4-203ENST00000429162 STK26Q9P289 416 aa26.43■■□□□ 1.82
CASC4-203ENST00000429162 NINLQ9Y2I6 1382 aa26.43■■□□□ 1.82
CASC4-203ENST00000429162 IRX6P78412 446 aaPredicted RBP26.42■■□□□ 1.82
CASC4-203ENST00000429162 DLC1Q96QB1 1528 aa26.42■■□□□ 1.82
CASC4-203ENST00000429162 TNRQ92752 1358 aa26.42■■□□□ 1.82
CASC4-203ENST00000429162 SLC12A5Q9H2X9 1139 aa26.41■■□□□ 1.82
CASC4-203ENST00000429162 ANKRD36BQ8N2N9 1353 aa26.41■■□□□ 1.82
CASC4-203ENST00000429162 SENP3-EIF4A1A0A087X0R7 540 aa26.4■■□□□ 1.82
CASC4-203ENST00000429162 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms