RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 NPHP4O75161 1426 aaPredicted RBP17.08■□□□□ 0.32
PABPC1P11-201ENST00000428966 POLR1AO95602 1720 aaPredicted RBP17.07■□□□□ 0.32
PABPC1P11-201ENST00000428966 ZFYVE9O95405 1425 aa17.07■□□□□ 0.32
PABPC1P11-201ENST00000428966 EID1Q9Y6B2 187 aa17.07■□□□□ 0.32
PABPC1P11-201ENST00000428966 NCBP3Q53F19 620 aaKnown RBP17.06■□□□□ 0.32
PABPC1P11-201ENST00000428966 RIMS2Q9UQ26 1411 aa17.04■□□□□ 0.32
PABPC1P11-201ENST00000428966 MYO5BQ9ULV0 1848 aa17.04■□□□□ 0.32
PABPC1P11-201ENST00000428966 ZNF335Q9H4Z2 1342 aaPredicted RBP17.04■□□□□ 0.32
PABPC1P11-201ENST00000428966 NUTM2DQ5VT03 806 aaPredicted RBP17.03■□□□□ 0.32
PABPC1P11-201ENST00000428966 CCDC144AA2RUR9 1427 aa17.02■□□□□ 0.32
PABPC1P11-201ENST00000428966 IQGAP1P46940 1657 aa17.02■□□□□ 0.32
PABPC1P11-201ENST00000428966 ZNF326Q5BKZ1 582 aaKnown RBP17■□□□□ 0.31
PABPC1P11-201ENST00000428966 ANKRD30BQ9BXX2 1392 aa16.99■□□□□ 0.31
PABPC1P11-201ENST00000428966 LTBP4Q8N2S1 1624 aa16.99■□□□□ 0.31
PABPC1P11-201ENST00000428966 PPP1R15AO75807 674 aaPredicted RBP16.99■□□□□ 0.31
PABPC1P11-201ENST00000428966 HDGFP51858 240 aaKnown RBP16.98■□□□□ 0.31
PABPC1P11-201ENST00000428966 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.98■□□□□ 0.31
PABPC1P11-201ENST00000428966 SLC26A8Q96RN1 970 aa16.98■□□□□ 0.31
PABPC1P11-201ENST00000428966 PLEKHG1Q9ULL1 1385 aa16.98■□□□□ 0.31
PABPC1P11-201ENST00000428966 SPATA31E1Q6ZUB1 1445 aa16.96■□□□□ 0.31
PABPC1P11-201ENST00000428966 NEXMIFQ5QGS0 1516 aa16.96■□□□□ 0.3
PABPC1P11-201ENST00000428966 CERKQ8TCT0 537 aa16.95■□□□□ 0.3
PABPC1P11-201ENST00000428966 KIF1BO60333 1816 aa16.94■□□□□ 0.3
PABPC1P11-201ENST00000428966 RGL3Q3MIN7 710 aa16.94■□□□□ 0.3
PABPC1P11-201ENST00000428966 BCANQ96GW7 911 aa16.94■□□□□ 0.3
PABPC1P11-201ENST00000428966 ADAMTS13Q76LX8 1427 aa16.92■□□□□ 0.3
PABPC1P11-201ENST00000428966 RPGRIP1LQ68CZ1 1315 aa16.91■□□□□ 0.3
PABPC1P11-201ENST00000428966 CCER1Q8TC90 406 aaPredicted RBP16.91■□□□□ 0.3
PABPC1P11-201ENST00000428966 TBX22Q9Y458 520 aa16.89■□□□□ 0.29
PABPC1P11-201ENST00000428966 VGFO15240 615 aaPredicted RBP16.89■□□□□ 0.29
PABPC1P11-201ENST00000428966 DHX57Q6P158 1386 aaKnown RBP16.88■□□□□ 0.29
PABPC1P11-201ENST00000428966 STRCP1A6NGW2 1772 aa16.88■□□□□ 0.29
PABPC1P11-201ENST00000428966 SETBP1Q9Y6X0 1596 aa16.88■□□□□ 0.29
PABPC1P11-201ENST00000428966 NRXN3Q9Y4C0 1643 aa16.88■□□□□ 0.29
PABPC1P11-201ENST00000428966 MSH5O43196 834 aa16.87■□□□□ 0.29
PABPC1P11-201ENST00000428966 CPS1P31327 1500 aa16.87■□□□□ 0.29
PABPC1P11-201ENST00000428966 ADGRF5Q8IZF2 1346 aa16.86■□□□□ 0.29
PABPC1P11-201ENST00000428966 KCNA6P17658 529 aa16.86■□□□□ 0.29
PABPC1P11-201ENST00000428966 PPLO60437 1756 aa16.85■□□□□ 0.29
PABPC1P11-201ENST00000428966 LRRC7Q96NW7 1537 aa16.85■□□□□ 0.29
PABPC1P11-201ENST00000428966 DIP2AQ14689 1571 aa16.84■□□□□ 0.29
PABPC1P11-201ENST00000428966 METP08581 1390 aa16.84■□□□□ 0.29
PABPC1P11-201ENST00000428966 PTPRUQ92729 1446 aa16.82■□□□□ 0.28
PABPC1P11-201ENST00000428966 PIK3R4Q99570 1358 aa16.82■□□□□ 0.28
PABPC1P11-201ENST00000428966 IQSEC2Q5JU85 1478 aa16.82■□□□□ 0.28
PABPC1P11-201ENST00000428966 NWD1Q149M9 1564 aa16.82■□□□□ 0.28
PABPC1P11-201ENST00000428966 RBM33Q96EV2 1170 aaKnown RBP16.81■□□□□ 0.28
PABPC1P11-201ENST00000428966 IFT172Q9UG01 1749 aa16.81■□□□□ 0.28
PABPC1P11-201ENST00000428966 FBXO41Q8TF61 875 aa16.8■□□□□ 0.28
PABPC1P11-201ENST00000428966 PIK3C2GO75747 1445 aa16.8■□□□□ 0.28
PABPC1P11-201ENST00000428966 ILDR1Q86SU0 546 aaPredicted RBP16.8■□□□□ 0.28
PABPC1P11-201ENST00000428966 SIN3AQ96ST3 1273 aa16.8■□□□□ 0.28
PABPC1P11-201ENST00000428966 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
PABPC1P11-201ENST00000428966 AMOTL2Q9Y2J4 779 aa16.79■□□□□ 0.28
PABPC1P11-201ENST00000428966 ALKQ9UM73 1620 aa16.79■□□□□ 0.28
PABPC1P11-201ENST00000428966 TMEM94Q12767 1356 aa16.79■□□□□ 0.28
PABPC1P11-201ENST00000428966 NKTRP30414 1462 aaKnown RBP16.79■□□□□ 0.28
PABPC1P11-201ENST00000428966 DCAF11Q8TEB1 546 aa16.79■□□□□ 0.28
PABPC1P11-201ENST00000428966 MYOM2P54296 1465 aa16.78■□□□□ 0.28
PABPC1P11-201ENST00000428966 CHD2O14647 1828 aaKnown RBP16.78■□□□□ 0.28
PABPC1P11-201ENST00000428966 PROSER2Q86WR7 435 aaPredicted RBP16.78■□□□□ 0.28
PABPC1P11-201ENST00000428966 NRXN1Q9ULB1 1477 aa16.78■□□□□ 0.28
PABPC1P11-201ENST00000428966 KDM2AQ9Y2K7 1162 aa16.77■□□□□ 0.27
PABPC1P11-201ENST00000428966 SETD1AO15047 1707 aaKnown RBP16.76■□□□□ 0.27
PABPC1P11-201ENST00000428966 UBAP1LF5GYI3 381 aa16.74■□□□□ 0.27
PABPC1P11-201ENST00000428966 NEUROD1Q13562 356 aa16.74■□□□□ 0.27
PABPC1P11-201ENST00000428966 CFAP70Q5T0N1 1121 aa16.74■□□□□ 0.27
PABPC1P11-201ENST00000428966 XRN1Q8IZH2 1706 aaKnown RBP16.74■□□□□ 0.27
PABPC1P11-201ENST00000428966 TMEM132EQ6IEE7 984 aa16.73■□□□□ 0.27
PABPC1P11-201ENST00000428966 C14orf93Q9H972 538 aaKnown RBP16.73■□□□□ 0.27
PABPC1P11-201ENST00000428966 XIRP1Q702N8 1843 aaKnown RBP16.73■□□□□ 0.27
PABPC1P11-201ENST00000428966 ASXL1Q8IXJ9 1541 aa16.72■□□□□ 0.27
PABPC1P11-201ENST00000428966 L3MBTL2Q969R5 705 aa16.71■□□□□ 0.27
PABPC1P11-201ENST00000428966 STAC3Q96MF2 364 aa16.71■□□□□ 0.27
PABPC1P11-201ENST00000428966 NPM3O75607 178 aaKnown RBP16.7■□□□□ 0.26
PABPC1P11-201ENST00000428966 ROBO2Q9HCK4 1378 aa16.7■□□□□ 0.26
PABPC1P11-201ENST00000428966 TOM1O60784 492 aa16.69■□□□□ 0.26
PABPC1P11-201ENST00000428966 PRAG1Q86YV5 1406 aa16.69■□□□□ 0.26
PABPC1P11-201ENST00000428966 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
PABPC1P11-201ENST00000428966 PTCH1Q13635 1447 aa16.68■□□□□ 0.26
PABPC1P11-201ENST00000428966 NCOA3Q9Y6Q9 1424 aa16.68■□□□□ 0.26
PABPC1P11-201ENST00000428966 STK26Q9P289 416 aa16.68■□□□□ 0.26
PABPC1P11-201ENST00000428966 PIP4K2BP78356 416 aa16.67■□□□□ 0.26
PABPC1P11-201ENST00000428966 LRPPRCP42704 1394 aaKnown RBP16.67■□□□□ 0.26
PABPC1P11-201ENST00000428966 MSH6P52701 1360 aa16.67■□□□□ 0.26
PABPC1P11-201ENST00000428966 C14orf37Q86TY3 774 aa16.67■□□□□ 0.26
PABPC1P11-201ENST00000428966 YTHDC2Q9H6S0 1430 aaKnown RBP16.66■□□□□ 0.26
PABPC1P11-201ENST00000428966 TECPR2O15040 1411 aa16.66■□□□□ 0.26
PABPC1P11-201ENST00000428966 ABCC11Q96J66 1382 aa16.66■□□□□ 0.26
PABPC1P11-201ENST00000428966 C19orf44Q9H6X5 657 aa16.65■□□□□ 0.26
PABPC1P11-201ENST00000428966 ADGRB1O14514 1584 aa16.65■□□□□ 0.26
PABPC1P11-201ENST00000428966 LAMC1P11047 1609 aa16.65■□□□□ 0.26
PABPC1P11-201ENST00000428966 WAPLQ7Z5K2 1190 aa16.63■□□□□ 0.25
PABPC1P11-201ENST00000428966 PLEKHH1Q9ULM0 1364 aa16.62■□□□□ 0.25
PABPC1P11-201ENST00000428966 ADGRL3Q9HAR2 1447 aa16.62■□□□□ 0.25
PABPC1P11-201ENST00000428966 DIEXFQ68CQ4 756 aaKnown RBP16.62■□□□□ 0.25
PABPC1P11-201ENST00000428966 PELP1Q8IZL8 1130 aaKnown RBP16.62■□□□□ 0.25
PABPC1P11-201ENST00000428966 NBPF1Q3BBV0 1214 aa16.61■□□□□ 0.25
PABPC1P11-201ENST00000428966 SLAIN2Q9P270 581 aa16.6■□□□□ 0.25
PABPC1P11-201ENST00000428966 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms