RNA–Protein interactions for RNA: ENST00000428946.5

LRRC23-204, Transcript of leucine rich repeat containing 23, humanhuman

TSL 3

Gene LRRC23, Length 969 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC23-204ENST00000428946 ILDR2Q71H61 639 aa27.73■■■□□ 2.03
LRRC23-204ENST00000428946 SLC26A8Q96RN1 970 aa27.73■■■□□ 2.03
LRRC23-204ENST00000428946 ZFYVE9O95405 1425 aa27.71■■■□□ 2.03
LRRC23-204ENST00000428946 RIMS2Q9UQ26 1411 aa27.7■■■□□ 2.03
LRRC23-204ENST00000428946 CHGAP10645 457 aaKnown RBP27.69■■■□□ 2.02
LRRC23-204ENST00000428946 BCANQ96GW7 911 aa27.69■■■□□ 2.02
LRRC23-204ENST00000428946 NWD1Q149M9 1564 aa27.65■■■□□ 2.02
LRRC23-204ENST00000428946 PPP1R15AO75807 674 aaPredicted RBP27.65■■■□□ 2.02
LRRC23-204ENST00000428946 SPHKAPQ2M3C7 1700 aa27.64■■■□□ 2.02
LRRC23-204ENST00000428946 NUTM2DQ5VT03 806 aaPredicted RBP27.63■■■□□ 2.01
LRRC23-204ENST00000428946 RBM33Q96EV2 1170 aaKnown RBP27.63■■■□□ 2.01
LRRC23-204ENST00000428946 TMEM94Q12767 1356 aa27.62■■■□□ 2.01
LRRC23-204ENST00000428946 PLEKHG1Q9ULL1 1385 aa27.62■■■□□ 2.01
LRRC23-204ENST00000428946 MED1Q15648 1581 aaPredicted RBP27.62■■■□□ 2.01
LRRC23-204ENST00000428946 KCNA6P17658 529 aa27.62■■■□□ 2.01
LRRC23-204ENST00000428946 NKTRP30414 1462 aaKnown RBP27.59■■■□□ 2.01
LRRC23-204ENST00000428946 CHD2O14647 1828 aaKnown RBP27.59■■■□□ 2.01
LRRC23-204ENST00000428946 NAIPQ13075 1403 aa27.58■■■□□ 2.01
LRRC23-204ENST00000428946 PROSER2Q86WR7 435 aaPredicted RBP27.57■■■□□ 2
LRRC23-204ENST00000428946 HDGFP51858 240 aaKnown RBP27.54■■■□□ 2
LRRC23-204ENST00000428946 ADAMTS13Q76LX8 1427 aa27.52■■■□□ 2
LRRC23-204ENST00000428946 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.52■■■□□ 2
LRRC23-204ENST00000428946 CLTCL1P53675 1640 aa27.52■■■□□ 2
LRRC23-204ENST00000428946 DIP2AQ14689 1571 aa27.5■■□□□ 1.99
LRRC23-204ENST00000428946 ROBO1Q9Y6N7 1651 aa27.49■■□□□ 1.99
LRRC23-204ENST00000428946 HFM1A2PYH4 1435 aa27.47■■□□□ 1.99
LRRC23-204ENST00000428946 TRPM2O94759 1503 aa27.46■■□□□ 1.99
LRRC23-204ENST00000428946 TBX22Q9Y458 520 aa27.46■■□□□ 1.99
LRRC23-204ENST00000428946 NRXN3Q9Y4C0 1643 aa27.45■■□□□ 1.99
LRRC23-204ENST00000428946 MSH6P52701 1360 aa27.45■■□□□ 1.98
LRRC23-204ENST00000428946 SOCS7O14512 581 aa27.44■■□□□ 1.98
LRRC23-204ENST00000428946 FAM135BQ49AJ0 1406 aa27.43■■□□□ 1.98
LRRC23-204ENST00000428946 ZNF326Q5BKZ1 582 aaKnown RBP27.43■■□□□ 1.98
LRRC23-204ENST00000428946 TRIM52Q96A61 297 aa27.43■■□□□ 1.98
LRRC23-204ENST00000428946 KIF1BO60333 1816 aa27.43■■□□□ 1.98
LRRC23-204ENST00000428946 SETBP1Q9Y6X0 1596 aa27.39■■□□□ 1.98
LRRC23-204ENST00000428946 NEXMIFQ5QGS0 1516 aa27.39■■□□□ 1.98
LRRC23-204ENST00000428946 PTPRUQ92729 1446 aa27.39■■□□□ 1.97
LRRC23-204ENST00000428946 PHF23Q9BUL5 403 aaPredicted RBP27.37■■□□□ 1.97
LRRC23-204ENST00000428946 PIK3R4Q99570 1358 aa27.36■■□□□ 1.97
LRRC23-204ENST00000428946 C14orf37Q86TY3 774 aa27.36■■□□□ 1.97
LRRC23-204ENST00000428946 XRN1Q8IZH2 1706 aaKnown RBP27.36■■□□□ 1.97
LRRC23-204ENST00000428946 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.36■■□□□ 1.97
LRRC23-204ENST00000428946 PHLPP1O60346 1717 aa27.33■■□□□ 1.97
LRRC23-204ENST00000428946 AMOTL2Q9Y2J4 779 aa27.33■■□□□ 1.97
LRRC23-204ENST00000428946 SLC4A1APQ9BWU0 796 aaKnown RBP27.32■■□□□ 1.96
LRRC23-204ENST00000428946 SLAIN2Q9P270 581 aa27.32■■□□□ 1.96
LRRC23-204ENST00000428946 NCOA3Q9Y6Q9 1424 aa27.3■■□□□ 1.96
LRRC23-204ENST00000428946 METP08581 1390 aa27.29■■□□□ 1.96
LRRC23-204ENST00000428946 FOXD1Q16676 465 aa27.28■■□□□ 1.96
LRRC23-204ENST00000428946 PPLO60437 1756 aa27.24■■□□□ 1.95
LRRC23-204ENST00000428946 SETD1AO15047 1707 aaKnown RBP27.24■■□□□ 1.95
LRRC23-204ENST00000428946 COL16A1Q07092 1604 aaPredicted RBP27.23■■□□□ 1.95
LRRC23-204ENST00000428946 C19orf44Q9H6X5 657 aa27.23■■□□□ 1.95
LRRC23-204ENST00000428946 ATF3P18847 181 aa27.22■■□□□ 1.95
LRRC23-204ENST00000428946 SETD5Q9C0A6 1442 aa27.22■■□□□ 1.95
LRRC23-204ENST00000428946 CADPS2Q86UW7 1296 aa27.21■■□□□ 1.95
LRRC23-204ENST00000428946 NALCNQ8IZF0 1738 aa27.19■■□□□ 1.94
LRRC23-204ENST00000428946 MPHOSPH9Q99550 1183 aa27.18■■□□□ 1.94
LRRC23-204ENST00000428946 RGS17Q9UGC6 210 aaPredicted RBP27.17■■□□□ 1.94
LRRC23-204ENST00000428946 AHDC1Q5TGY3 1603 aaPredicted RBP27.16■■□□□ 1.94
LRRC23-204ENST00000428946 DCCP43146 1447 aa27.15■■□□□ 1.94
LRRC23-204ENST00000428946 RAB3GAP2Q9H2M9 1393 aa27.13■■□□□ 1.93
LRRC23-204ENST00000428946 JCADQ9P266 1359 aa27.13■■□□□ 1.93
LRRC23-204ENST00000428946 VGFO15240 615 aaPredicted RBP27.13■■□□□ 1.93
LRRC23-204ENST00000428946 CCDC144AA2RUR9 1427 aa27.13■■□□□ 1.93
LRRC23-204ENST00000428946 ADGRL3Q9HAR2 1447 aa27.13■■□□□ 1.93
LRRC23-204ENST00000428946 MST1RQ04912 1400 aa27.12■■□□□ 1.93
LRRC23-204ENST00000428946 BRINP3Q76B58 766 aa27.11■■□□□ 1.93
LRRC23-204ENST00000428946 RPGRIP1LQ68CZ1 1315 aa27.11■■□□□ 1.93
LRRC23-204ENST00000428946 ASXL1Q8IXJ9 1541 aa27.11■■□□□ 1.93
LRRC23-204ENST00000428946 IFT172Q9UG01 1749 aa27.1■■□□□ 1.93
LRRC23-204ENST00000428946 ACIN1Q9UKV3 1341 aaKnown RBP27.08■■□□□ 1.93
LRRC23-204ENST00000428946 PTCH1Q13635 1447 aa27.07■■□□□ 1.92
LRRC23-204ENST00000428946 RGL3Q3MIN7 710 aa27.07■■□□□ 1.92
LRRC23-204ENST00000428946 SHPRHQ149N8 1683 aa27.07■■□□□ 1.92
LRRC23-204ENST00000428946 ROBO2Q9HCK4 1378 aa27.07■■□□□ 1.92
LRRC23-204ENST00000428946 SPATA31E1Q6ZUB1 1445 aa27.07■■□□□ 1.92
LRRC23-204ENST00000428946 LRP6O75581 1613 aa27.06■■□□□ 1.92
LRRC23-204ENST00000428946 NHSL1Q5SYE7 1610 aa27.06■■□□□ 1.92
LRRC23-204ENST00000428946 ADGRF5Q8IZF2 1346 aa27.04■■□□□ 1.92
LRRC23-204ENST00000428946 POTEAQ6S8J7 498 aa27.03■■□□□ 1.92
LRRC23-204ENST00000428946 PRAG1Q86YV5 1406 aa26.99■■□□□ 1.91
LRRC23-204ENST00000428946 DDX17Q92841 729 aaKnown RBP26.99■■□□□ 1.91
LRRC23-204ENST00000428946 HRCP23327 699 aa26.98■■□□□ 1.91
LRRC23-204ENST00000428946 SPATA31A6Q5VVP1 1343 aa26.97■■□□□ 1.91
LRRC23-204ENST00000428946 C1orf167Q5SNV9 1468 aa26.96■■□□□ 1.91
LRRC23-204ENST00000428946 ANKRD30BQ9BXX2 1392 aa26.96■■□□□ 1.91
LRRC23-204ENST00000428946 MEX3CQ5U5Q3 659 aaKnown RBP26.95■■□□□ 1.9
LRRC23-204ENST00000428946 PIK3C2GO75747 1445 aa26.93■■□□□ 1.9
LRRC23-204ENST00000428946 NUTM2BA6NNL0 878 aaPredicted RBP26.92■■□□□ 1.9
LRRC23-204ENST00000428946 NUTM2EB1AL46 878 aaPredicted RBP26.92■■□□□ 1.9
LRRC23-204ENST00000428946 NUTM2AQ8IVF1 878 aaPredicted RBP26.92■■□□□ 1.9
LRRC23-204ENST00000428946 STK26Q9P289 416 aa26.92■■□□□ 1.9
LRRC23-204ENST00000428946 KNDC1Q76NI1 1749 aa26.91■■□□□ 1.9
LRRC23-204ENST00000428946 CDC42BPGQ6DT37 1551 aa26.89■■□□□ 1.9
LRRC23-204ENST00000428946 TMEM132EQ6IEE7 984 aa26.89■■□□□ 1.9
LRRC23-204ENST00000428946 LAMC1P11047 1609 aa26.88■■□□□ 1.89
LRRC23-204ENST00000428946 ORAI2Q96SN7 254 aa26.88■■□□□ 1.89
LRRC23-204ENST00000428946 LRPPRCP42704 1394 aaKnown RBP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms