RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 A2ML1A8K2U0 1454 aa15.55■□□□□ 0.08
CRIM1-204ENST00000428774 NLRP1Q9C000 1473 aa15.55■□□□□ 0.08
CRIM1-204ENST00000428774 NRXN1Q9ULB1 1477 aa15.55■□□□□ 0.08
CRIM1-204ENST00000428774 IDI1Q13907 227 aa15.55■□□□□ 0.08
CRIM1-204ENST00000428774 SLC52A1Q9NWF4 448 aa15.55■□□□□ 0.08
CRIM1-204ENST00000428774 DCAF11Q8TEB1 546 aa15.54■□□□□ 0.08
CRIM1-204ENST00000428774 CHGAP10645 457 aaKnown RBP15.52■□□□□ 0.08
CRIM1-204ENST00000428774 HSPA2P54652 639 aa15.52■□□□□ 0.08
CRIM1-204ENST00000428774 IQGAP1P46940 1657 aa15.51■□□□□ 0.07
CRIM1-204ENST00000428774 KDM2AQ9Y2K7 1162 aa15.51■□□□□ 0.07
CRIM1-204ENST00000428774 ZNF326Q5BKZ1 582 aaKnown RBP15.5■□□□□ 0.07
CRIM1-204ENST00000428774 STRCQ7RTU9 1775 aa15.49■□□□□ 0.07
CRIM1-204ENST00000428774 SETD1AO15047 1707 aaKnown RBP15.49■□□□□ 0.07
CRIM1-204ENST00000428774 PIK3C2GO75747 1445 aa15.49■□□□□ 0.07
CRIM1-204ENST00000428774 POLR1AO95602 1720 aaPredicted RBP15.48■□□□□ 0.07
CRIM1-204ENST00000428774 NRXN3Q9Y4C0 1643 aa15.48■□□□□ 0.07
CRIM1-204ENST00000428774 ZFYVE9O95405 1425 aa15.48■□□□□ 0.07
CRIM1-204ENST00000428774 RPGRIP1LQ68CZ1 1315 aa15.46■□□□□ 0.07
CRIM1-204ENST00000428774 ADGRF5Q8IZF2 1346 aa15.46■□□□□ 0.07
CRIM1-204ENST00000428774 SETBP1Q9Y6X0 1596 aa15.46■□□□□ 0.07
CRIM1-204ENST00000428774 RIMS2Q9UQ26 1411 aa15.46■□□□□ 0.07
CRIM1-204ENST00000428774 SLIT1O75093 1534 aa15.46■□□□□ 0.07
CRIM1-204ENST00000428774 ASXL1Q8IXJ9 1541 aa15.46■□□□□ 0.07
CRIM1-204ENST00000428774 GPRASP1Q5JY77 1395 aa15.46■□□□□ 0.07
CRIM1-204ENST00000428774 ARHGAP23Q9P227 1491 aa15.45■□□□□ 0.06
CRIM1-204ENST00000428774 STAC3Q96MF2 364 aa15.44■□□□□ 0.06
CRIM1-204ENST00000428774 ADGRB1O14514 1584 aa15.44■□□□□ 0.06
CRIM1-204ENST00000428774 ROCK2O75116 1388 aaKnown RBP15.43■□□□□ 0.06
CRIM1-204ENST00000428774 STAG3Q9UJ98 1225 aa15.42■□□□□ 0.06
CRIM1-204ENST00000428774 TMEM2Q9UHN6 1383 aa15.41■□□□□ 0.06
CRIM1-204ENST00000428774 ALKQ9UM73 1620 aa15.41■□□□□ 0.06
CRIM1-204ENST00000428774 ARHGEF28Q8N1W1 1705 aaKnown RBP15.4■□□□□ 0.06
CRIM1-204ENST00000428774 USP47Q96K76 1375 aa15.4■□□□□ 0.06
CRIM1-204ENST00000428774 NUTM2DQ5VT03 806 aaPredicted RBP15.4■□□□□ 0.06
CRIM1-204ENST00000428774 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
CRIM1-204ENST00000428774 NCKAP5LQ9HCH0 1330 aa15.4■□□□□ 0.06
CRIM1-204ENST00000428774 ZNF316A6NFI3 1004 aaPredicted RBP15.39■□□□□ 0.05
CRIM1-204ENST00000428774 NBPF1Q3BBV0 1214 aa15.39■□□□□ 0.05
CRIM1-204ENST00000428774 LTKP29376 864 aa15.38■□□□□ 0.05
CRIM1-204ENST00000428774 HSPA5P11021 654 aaKnown RBP15.37■□□□□ 0.05
CRIM1-204ENST00000428774 THEMISQ8N1K5 641 aaPredicted RBP15.37■□□□□ 0.05
CRIM1-204ENST00000428774 KNDC1Q76NI1 1749 aa15.37■□□□□ 0.05
CRIM1-204ENST00000428774 SCAF11Q99590 1463 aaKnown RBP15.36■□□□□ 0.05
CRIM1-204ENST00000428774 VGFO15240 615 aaPredicted RBP15.36■□□□□ 0.05
CRIM1-204ENST00000428774 CFAP70Q5T0N1 1121 aa15.36■□□□□ 0.05
CRIM1-204ENST00000428774 CARD11Q9BXL7 1154 aa15.36■□□□□ 0.05
CRIM1-204ENST00000428774 QRICH2Q9H0J4 1663 aa15.35■□□□□ 0.05
CRIM1-204ENST00000428774 EIF4G2P78344 907 aaKnown RBP eCLIP15.35■□□□□ 0.05
CRIM1-204ENST00000428774 HIRIP3Q9BW71 556 aaPredicted RBP15.35■□□□□ 0.05
CRIM1-204ENST00000428774 DIP2AQ14689 1571 aa15.33■□□□□ 0.05
CRIM1-204ENST00000428774 TXNDC2Q86VQ3 553 aa15.33■□□□□ 0.04
CRIM1-204ENST00000428774 C14orf93Q9H972 538 aaKnown RBP15.33■□□□□ 0.04
CRIM1-204ENST00000428774 PLEKHG1Q9ULL1 1385 aa15.33■□□□□ 0.04
CRIM1-204ENST00000428774 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.32■□□□□ 0.04
CRIM1-204ENST00000428774 NPHP4O75161 1426 aaPredicted RBP15.32■□□□□ 0.04
CRIM1-204ENST00000428774 ADAMTS13Q76LX8 1427 aa15.32■□□□□ 0.04
CRIM1-204ENST00000428774 MED14O60244 1454 aa15.32■□□□□ 0.04
CRIM1-204ENST00000428774 ANKLE2Q86XL3 938 aa15.31■□□□□ 0.04
CRIM1-204ENST00000428774 STRCP1A6NGW2 1772 aa15.3■□□□□ 0.04
CRIM1-204ENST00000428774 CPS1P31327 1500 aa15.29■□□□□ 0.04
CRIM1-204ENST00000428774 XRN1Q8IZH2 1706 aaKnown RBP15.29■□□□□ 0.04
CRIM1-204ENST00000428774 DLC1Q96QB1 1528 aa15.28■□□□□ 0.04
CRIM1-204ENST00000428774 EID1Q9Y6B2 187 aa15.28■□□□□ 0.04
CRIM1-204ENST00000428774 YTHDC2Q9H6S0 1430 aaKnown RBP15.27■□□□□ 0.04
CRIM1-204ENST00000428774 EIF3AQ14152 1382 aaKnown RBP15.27■□□□□ 0.04
CRIM1-204ENST00000428774 HDGFP51858 240 aaKnown RBP15.26■□□□□ 0.03
CRIM1-204ENST00000428774 TMEM132EQ6IEE7 984 aa15.26■□□□□ 0.03
CRIM1-204ENST00000428774 METP08581 1390 aa15.25■□□□□ 0.03
CRIM1-204ENST00000428774 ST20-MTHFSA0A0A6YYL1 179 aa15.25■□□□□ 0.03
CRIM1-204ENST00000428774 SLC26A8Q96RN1 970 aa15.25■□□□□ 0.03
CRIM1-204ENST00000428774 MYOM1P52179 1685 aa15.25■□□□□ 0.03
CRIM1-204ENST00000428774 CHD2O14647 1828 aaKnown RBP15.24■□□□□ 0.03
CRIM1-204ENST00000428774 CCDC7Q96M83 1385 aa15.24■□□□□ 0.03
CRIM1-204ENST00000428774 BCANQ96GW7 911 aa15.23■□□□□ 0.03
CRIM1-204ENST00000428774 TECPR2O15040 1411 aa15.23■□□□□ 0.03
CRIM1-204ENST00000428774 LRPPRCP42704 1394 aaKnown RBP15.23■□□□□ 0.03
CRIM1-204ENST00000428774 WASHC2AQ641Q2 1341 aa15.22■□□□□ 0.03
CRIM1-204ENST00000428774 C11orf95C9JLR9 678 aaPredicted RBP15.22■□□□□ 0.03
CRIM1-204ENST00000428774 TESK2Q96S53 571 aa15.22■□□□□ 0.03
CRIM1-204ENST00000428774 DISP3Q9P2K9 1392 aa15.22■□□□□ 0.03
CRIM1-204ENST00000428774 SBNO2Q9Y2G9 1366 aa15.22■□□□□ 0.03
CRIM1-204ENST00000428774 TULP4Q9NRJ4 1543 aa15.22■□□□□ 0.03
CRIM1-204ENST00000428774 NWD1Q149M9 1564 aa15.21■□□□□ 0.03
CRIM1-204ENST00000428774 PTPRUQ92729 1446 aa15.21■□□□□ 0.03
CRIM1-204ENST00000428774 TRAK1Q9UPV9 953 aa15.21■□□□□ 0.03
CRIM1-204ENST00000428774 KIF7Q2M1P5 1343 aa15.2■□□□□ 0.02
CRIM1-204ENST00000428774 ZNF335Q9H4Z2 1342 aaPredicted RBP15.19■□□□□ 0.02
CRIM1-204ENST00000428774 XIRP1Q702N8 1843 aaKnown RBP15.19■□□□□ 0.02
CRIM1-204ENST00000428774 CENPJQ9HC77 1338 aaPredicted RBP15.18■□□□□ 0.02
CRIM1-204ENST00000428774 ABCC11Q96J66 1382 aa15.18■□□□□ 0.02
CRIM1-204ENST00000428774 ADGRB2O60241 1585 aa15.18■□□□□ 0.02
CRIM1-204ENST00000428774 LTBP4Q8N2S1 1624 aa15.17■□□□□ 0.02
CRIM1-204ENST00000428774 STK26Q9P289 416 aa15.17■□□□□ 0.02
CRIM1-204ENST00000428774 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.17■□□□□ 0.02
CRIM1-204ENST00000428774 PTCH1Q13635 1447 aa15.17■□□□□ 0.02
CRIM1-204ENST00000428774 PLEKHH1Q9ULM0 1364 aa15.16■□□□□ 0.02
CRIM1-204ENST00000428774 FAM135BQ49AJ0 1406 aa15.16■□□□□ 0.02
CRIM1-204ENST00000428774 TBX22Q9Y458 520 aa15.15■□□□□ 0.02
CRIM1-204ENST00000428774 DMRT2Q9Y5R5 561 aa15.15■□□□□ 0.02
CRIM1-204ENST00000428774 NALCNQ8IZF0 1738 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms