RNA–Protein interactions for RNA: ENST00000428687.1

AL390728.5-201, humanhuman

TSL 3 BASIC

Gene AL390728.5, Length 706 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.5-201ENST00000428687 RIMS2Q9UQ26 1411 aa29.65■■■□□ 2.34
AL390728.5-201ENST00000428687 CHGAP10645 457 aaKnown RBP29.63■■■□□ 2.33
AL390728.5-201ENST00000428687 BCANQ96GW7 911 aa29.63■■■□□ 2.33
AL390728.5-201ENST00000428687 SENP3Q9H4L4 574 aaPredicted RBP29.63■■■□□ 2.33
AL390728.5-201ENST00000428687 ILDR2Q71H61 639 aa29.62■■■□□ 2.33
AL390728.5-201ENST00000428687 PPP1R15AO75807 674 aaPredicted RBP29.61■■■□□ 2.33
AL390728.5-201ENST00000428687 KCNA6P17658 529 aa29.61■■■□□ 2.33
AL390728.5-201ENST00000428687 PLEKHG1Q9ULL1 1385 aa29.61■■■□□ 2.33
AL390728.5-201ENST00000428687 XIRP1Q702N8 1843 aaKnown RBP29.6■■■□□ 2.33
AL390728.5-201ENST00000428687 TMEM94Q12767 1356 aa29.58■■■□□ 2.33
AL390728.5-201ENST00000428687 NWD1Q149M9 1564 aa29.57■■■□□ 2.32
AL390728.5-201ENST00000428687 HDGFP51858 240 aaKnown RBP29.55■■■□□ 2.32
AL390728.5-201ENST00000428687 NKTRP30414 1462 aaKnown RBP29.55■■■□□ 2.32
AL390728.5-201ENST00000428687 NAIPQ13075 1403 aa29.54■■■□□ 2.32
AL390728.5-201ENST00000428687 PROSER2Q86WR7 435 aaPredicted RBP29.53■■■□□ 2.32
AL390728.5-201ENST00000428687 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.53■■■□□ 2.32
AL390728.5-201ENST00000428687 NUTM2DQ5VT03 806 aaPredicted RBP29.52■■■□□ 2.32
AL390728.5-201ENST00000428687 RBM33Q96EV2 1170 aaKnown RBP29.51■■■□□ 2.31
AL390728.5-201ENST00000428687 MED1Q15648 1581 aaPredicted RBP29.5■■■□□ 2.31
AL390728.5-201ENST00000428687 SPHKAPQ2M3C7 1700 aa29.49■■■□□ 2.31
AL390728.5-201ENST00000428687 ADAMTS13Q76LX8 1427 aa29.45■■■□□ 2.31
AL390728.5-201ENST00000428687 TBX22Q9Y458 520 aa29.45■■■□□ 2.31
AL390728.5-201ENST00000428687 HFM1A2PYH4 1435 aa29.45■■■□□ 2.3
AL390728.5-201ENST00000428687 DIP2AQ14689 1571 aa29.43■■■□□ 2.3
AL390728.5-201ENST00000428687 CHD2O14647 1828 aaKnown RBP29.43■■■□□ 2.3
AL390728.5-201ENST00000428687 FAM135BQ49AJ0 1406 aa29.4■■■□□ 2.3
AL390728.5-201ENST00000428687 MSH6P52701 1360 aa29.39■■■□□ 2.3
AL390728.5-201ENST00000428687 TRPM2O94759 1503 aa29.39■■■□□ 2.3
AL390728.5-201ENST00000428687 CLTCL1P53675 1640 aa29.38■■■□□ 2.29
AL390728.5-201ENST00000428687 SOCS7O14512 581 aa29.37■■■□□ 2.29
AL390728.5-201ENST00000428687 TRIM52Q96A61 297 aa29.37■■■□□ 2.29
AL390728.5-201ENST00000428687 ZNF326Q5BKZ1 582 aaKnown RBP29.36■■■□□ 2.29
AL390728.5-201ENST00000428687 PIK3R4Q99570 1358 aa29.36■■■□□ 2.29
AL390728.5-201ENST00000428687 ROBO1Q9Y6N7 1651 aa29.34■■■□□ 2.29
AL390728.5-201ENST00000428687 SETBP1Q9Y6X0 1596 aa29.31■■■□□ 2.28
AL390728.5-201ENST00000428687 NRXN3Q9Y4C0 1643 aa29.31■■■□□ 2.28
AL390728.5-201ENST00000428687 PTPRUQ92729 1446 aa29.3■■■□□ 2.28
AL390728.5-201ENST00000428687 NCOA3Q9Y6Q9 1424 aa29.28■■■□□ 2.28
AL390728.5-201ENST00000428687 C14orf37Q86TY3 774 aa29.28■■■□□ 2.28
AL390728.5-201ENST00000428687 PHF23Q9BUL5 403 aaPredicted RBP29.28■■■□□ 2.28
AL390728.5-201ENST00000428687 SLC4A1APQ9BWU0 796 aaKnown RBP29.28■■■□□ 2.28
AL390728.5-201ENST00000428687 NEXMIFQ5QGS0 1516 aa29.28■■■□□ 2.28
AL390728.5-201ENST00000428687 SLAIN2Q9P270 581 aa29.27■■■□□ 2.28
AL390728.5-201ENST00000428687 AMOTL2Q9Y2J4 779 aa29.26■■■□□ 2.27
AL390728.5-201ENST00000428687 KIF1BO60333 1816 aa29.23■■■□□ 2.27
AL390728.5-201ENST00000428687 XRN1Q8IZH2 1706 aaKnown RBP29.22■■■□□ 2.27
AL390728.5-201ENST00000428687 METP08581 1390 aa29.21■■■□□ 2.27
AL390728.5-201ENST00000428687 C19orf44Q9H6X5 657 aa29.19■■■□□ 2.26
AL390728.5-201ENST00000428687 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.19■■■□□ 2.26
AL390728.5-201ENST00000428687 ATF3P18847 181 aa29.17■■■□□ 2.26
AL390728.5-201ENST00000428687 CADPS2Q86UW7 1296 aa29.17■■■□□ 2.26
AL390728.5-201ENST00000428687 FOXD1Q16676 465 aa29.16■■■□□ 2.26
AL390728.5-201ENST00000428687 PHLPP1O60346 1717 aa29.15■■■□□ 2.26
AL390728.5-201ENST00000428687 DCCP43146 1447 aa29.11■■■□□ 2.25
AL390728.5-201ENST00000428687 VGFO15240 615 aaPredicted RBP29.1■■■□□ 2.25
AL390728.5-201ENST00000428687 RPGRIP1LQ68CZ1 1315 aa29.09■■■□□ 2.25
AL390728.5-201ENST00000428687 COL16A1Q07092 1604 aaPredicted RBP29.09■■■□□ 2.25
AL390728.5-201ENST00000428687 JCADQ9P266 1359 aa29.07■■■□□ 2.24
AL390728.5-201ENST00000428687 CCDC144AA2RUR9 1427 aa29.06■■■□□ 2.24
AL390728.5-201ENST00000428687 MPHOSPH9Q99550 1183 aa29.06■■■□□ 2.24
AL390728.5-201ENST00000428687 RGS17Q9UGC6 210 aaPredicted RBP29.06■■■□□ 2.24
AL390728.5-201ENST00000428687 SETD1AO15047 1707 aaKnown RBP29.05■■■□□ 2.24
AL390728.5-201ENST00000428687 AHDC1Q5TGY3 1603 aaPredicted RBP29.05■■■□□ 2.24
AL390728.5-201ENST00000428687 ADGRL3Q9HAR2 1447 aa29.04■■■□□ 2.24
AL390728.5-201ENST00000428687 PPLO60437 1756 aa29.04■■■□□ 2.24
AL390728.5-201ENST00000428687 BRINP3Q76B58 766 aa29.03■■■□□ 2.24
AL390728.5-201ENST00000428687 MST1RQ04912 1400 aa29.02■■■□□ 2.24
AL390728.5-201ENST00000428687 PTCH1Q13635 1447 aa29.01■■■□□ 2.23
AL390728.5-201ENST00000428687 SETD5Q9C0A6 1442 aa29.01■■■□□ 2.23
AL390728.5-201ENST00000428687 NALCNQ8IZF0 1738 aa29■■■□□ 2.23
AL390728.5-201ENST00000428687 ASXL1Q8IXJ9 1541 aa28.99■■■□□ 2.23
AL390728.5-201ENST00000428687 SPATA31E1Q6ZUB1 1445 aa28.99■■■□□ 2.23
AL390728.5-201ENST00000428687 ROBO2Q9HCK4 1378 aa28.98■■■□□ 2.23
AL390728.5-201ENST00000428687 RGL3Q3MIN7 710 aa28.96■■■□□ 2.23
AL390728.5-201ENST00000428687 PRAG1Q86YV5 1406 aa28.95■■■□□ 2.23
AL390728.5-201ENST00000428687 ADGRF5Q8IZF2 1346 aa28.94■■■□□ 2.22
AL390728.5-201ENST00000428687 LRP6O75581 1613 aa28.92■■■□□ 2.22
AL390728.5-201ENST00000428687 ACIN1Q9UKV3 1341 aaKnown RBP28.92■■■□□ 2.22
AL390728.5-201ENST00000428687 RAB3GAP2Q9H2M9 1393 aa28.91■■■□□ 2.22
AL390728.5-201ENST00000428687 POTEAQ6S8J7 498 aa28.91■■■□□ 2.22
AL390728.5-201ENST00000428687 SPATA31A6Q5VVP1 1343 aa28.91■■■□□ 2.22
AL390728.5-201ENST00000428687 ANKRD30BQ9BXX2 1392 aa28.9■■■□□ 2.22
AL390728.5-201ENST00000428687 SHPRHQ149N8 1683 aa28.9■■■□□ 2.22
AL390728.5-201ENST00000428687 IFT172Q9UG01 1749 aa28.9■■■□□ 2.22
AL390728.5-201ENST00000428687 NHSL1Q5SYE7 1610 aa28.88■■■□□ 2.21
AL390728.5-201ENST00000428687 C1orf167Q5SNV9 1468 aa28.87■■■□□ 2.21
AL390728.5-201ENST00000428687 DDX17Q92841 729 aaKnown RBP28.85■■■□□ 2.21
AL390728.5-201ENST00000428687 MEX3CQ5U5Q3 659 aaKnown RBP28.84■■■□□ 2.21
AL390728.5-201ENST00000428687 PIK3C2GO75747 1445 aa28.83■■■□□ 2.21
AL390728.5-201ENST00000428687 STK26Q9P289 416 aa28.81■■■□□ 2.2
AL390728.5-201ENST00000428687 LRPPRCP42704 1394 aaKnown RBP28.8■■■□□ 2.2
AL390728.5-201ENST00000428687 TECPR2O15040 1411 aa28.79■■■□□ 2.2
AL390728.5-201ENST00000428687 NUTM2BA6NNL0 878 aaPredicted RBP28.79■■■□□ 2.2
AL390728.5-201ENST00000428687 NUTM2EB1AL46 878 aaPredicted RBP28.79■■■□□ 2.2
AL390728.5-201ENST00000428687 NUTM2AQ8IVF1 878 aaPredicted RBP28.79■■■□□ 2.2
AL390728.5-201ENST00000428687 CDC42BPGQ6DT37 1551 aa28.77■■■□□ 2.2
AL390728.5-201ENST00000428687 TMEM132EQ6IEE7 984 aa28.77■■■□□ 2.2
AL390728.5-201ENST00000428687 LRRC59Q96AG4 307 aaKnown RBP28.77■■■□□ 2.2
AL390728.5-201ENST00000428687 ORAI2Q96SN7 254 aa28.77■■■□□ 2.2
AL390728.5-201ENST00000428687 PNPLA6Q8IY17 1366 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms