RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 SENP3Q9H4L4 574 aaPredicted RBP23.86■■□□□ 1.41
SEC13-210ENST00000428626 MED1Q15648 1581 aaPredicted RBP23.85■■□□□ 1.41
SEC13-210ENST00000428626 SOCS7O14512 581 aa23.84■■□□□ 1.41
SEC13-210ENST00000428626 KCNA6P17658 529 aa23.83■■□□□ 1.41
SEC13-210ENST00000428626 TMEM94Q12767 1356 aa23.82■■□□□ 1.4
SEC13-210ENST00000428626 RBM33Q96EV2 1170 aaKnown RBP23.82■■□□□ 1.4
SEC13-210ENST00000428626 RIMS2Q9UQ26 1411 aa23.82■■□□□ 1.4
SEC13-210ENST00000428626 NUP155O75694 1391 aa23.81■■□□□ 1.4
SEC13-210ENST00000428626 NWD1Q149M9 1564 aa23.8■■□□□ 1.4
SEC13-210ENST00000428626 PLEKHG1Q9ULL1 1385 aa23.78■■□□□ 1.4
SEC13-210ENST00000428626 CHGAP10645 457 aaKnown RBP23.76■■□□□ 1.39
SEC13-210ENST00000428626 PROSER2Q86WR7 435 aaPredicted RBP23.76■■□□□ 1.39
SEC13-210ENST00000428626 NUTM2DQ5VT03 806 aaPredicted RBP23.75■■□□□ 1.39
SEC13-210ENST00000428626 BCANQ96GW7 911 aa23.75■■□□□ 1.39
SEC13-210ENST00000428626 RRBP1Q9P2E9 1410 aaKnown RBP23.75■■□□□ 1.39
SEC13-210ENST00000428626 NKTRP30414 1462 aaKnown RBP23.75■■□□□ 1.39
SEC13-210ENST00000428626 CHD2O14647 1828 aaKnown RBP23.74■■□□□ 1.39
SEC13-210ENST00000428626 ADAMTS13Q76LX8 1427 aa23.73■■□□□ 1.39
SEC13-210ENST00000428626 PPP1R15AO75807 674 aaPredicted RBP23.72■■□□□ 1.39
SEC13-210ENST00000428626 FAM135BQ49AJ0 1406 aa23.71■■□□□ 1.39
SEC13-210ENST00000428626 TBX22Q9Y458 520 aa23.68■■□□□ 1.38
SEC13-210ENST00000428626 HDGFP51858 240 aaKnown RBP23.67■■□□□ 1.38
SEC13-210ENST00000428626 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.67■■□□□ 1.38
SEC13-210ENST00000428626 SPHKAPQ2M3C7 1700 aa23.67■■□□□ 1.38
SEC13-210ENST00000428626 NAIPQ13075 1403 aa23.67■■□□□ 1.38
SEC13-210ENST00000428626 ROBO1Q9Y6N7 1651 aa23.67■■□□□ 1.38
SEC13-210ENST00000428626 MSH6P52701 1360 aa23.62■■□□□ 1.37
SEC13-210ENST00000428626 DIP2AQ14689 1571 aa23.61■■□□□ 1.37
SEC13-210ENST00000428626 PTPRUQ92729 1446 aa23.61■■□□□ 1.37
SEC13-210ENST00000428626 NRXN3Q9Y4C0 1643 aa23.61■■□□□ 1.37
SEC13-210ENST00000428626 CLTCL1P53675 1640 aa23.6■■□□□ 1.37
SEC13-210ENST00000428626 PHF23Q9BUL5 403 aaPredicted RBP23.58■■□□□ 1.37
SEC13-210ENST00000428626 SLAIN2Q9P270 581 aa23.58■■□□□ 1.37
SEC13-210ENST00000428626 RGS17Q9UGC6 210 aaPredicted RBP23.58■■□□□ 1.37
SEC13-210ENST00000428626 PIK3R4Q99570 1358 aa23.57■■□□□ 1.36
SEC13-210ENST00000428626 TRPM2O94759 1503 aa23.56■■□□□ 1.36
SEC13-210ENST00000428626 HFM1A2PYH4 1435 aa23.55■■□□□ 1.36
SEC13-210ENST00000428626 NCOA3Q9Y6Q9 1424 aa23.55■■□□□ 1.36
SEC13-210ENST00000428626 SETBP1Q9Y6X0 1596 aa23.55■■□□□ 1.36
SEC13-210ENST00000428626 AMOTL2Q9Y2J4 779 aa23.54■■□□□ 1.36
SEC13-210ENST00000428626 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.53■■□□□ 1.36
SEC13-210ENST00000428626 NEXMIFQ5QGS0 1516 aa23.53■■□□□ 1.36
SEC13-210ENST00000428626 ZNF326Q5BKZ1 582 aaKnown RBP23.52■■□□□ 1.36
SEC13-210ENST00000428626 XRN1Q8IZH2 1706 aaKnown RBP23.52■■□□□ 1.36
SEC13-210ENST00000428626 METP08581 1390 aa23.51■■□□□ 1.35
SEC13-210ENST00000428626 PHLPP1O60346 1717 aa23.5■■□□□ 1.35
SEC13-210ENST00000428626 C14orf37Q86TY3 774 aa23.49■■□□□ 1.35
SEC13-210ENST00000428626 C19orf44Q9H6X5 657 aa23.48■■□□□ 1.35
SEC13-210ENST00000428626 COL16A1Q07092 1604 aaPredicted RBP23.48■■□□□ 1.35
SEC13-210ENST00000428626 TRIM52Q96A61 297 aa23.47■■□□□ 1.35
SEC13-210ENST00000428626 KIF1BO60333 1816 aa23.47■■□□□ 1.35
SEC13-210ENST00000428626 CADPS2Q86UW7 1296 aa23.44■■□□□ 1.34
SEC13-210ENST00000428626 ATF3P18847 181 aa23.42■■□□□ 1.34
SEC13-210ENST00000428626 SLC4A1APQ9BWU0 796 aaKnown RBP23.42■■□□□ 1.34
SEC13-210ENST00000428626 JCADQ9P266 1359 aa23.41■■□□□ 1.34
SEC13-210ENST00000428626 FOXD1Q16676 465 aa23.41■■□□□ 1.34
SEC13-210ENST00000428626 POTEAQ6S8J7 498 aa23.41■■□□□ 1.34
SEC13-210ENST00000428626 AHDC1Q5TGY3 1603 aaPredicted RBP23.41■■□□□ 1.34
SEC13-210ENST00000428626 SETD1AO15047 1707 aaKnown RBP23.4■■□□□ 1.34
SEC13-210ENST00000428626 BRINP3Q76B58 766 aa23.39■■□□□ 1.33
SEC13-210ENST00000428626 DCCP43146 1447 aa23.38■■□□□ 1.33
SEC13-210ENST00000428626 MST1RQ04912 1400 aa23.37■■□□□ 1.33
SEC13-210ENST00000428626 LRP6O75581 1613 aa23.37■■□□□ 1.33
SEC13-210ENST00000428626 NALCNQ8IZF0 1738 aa23.36■■□□□ 1.33
SEC13-210ENST00000428626 PPLO60437 1756 aa23.35■■□□□ 1.33
SEC13-210ENST00000428626 ADGRL3Q9HAR2 1447 aa23.34■■□□□ 1.33
SEC13-210ENST00000428626 ASXL1Q8IXJ9 1541 aa23.33■■□□□ 1.33
SEC13-210ENST00000428626 VGFO15240 615 aaPredicted RBP23.32■■□□□ 1.32
SEC13-210ENST00000428626 ROBO2Q9HCK4 1378 aa23.31■■□□□ 1.32
SEC13-210ENST00000428626 SHPRHQ149N8 1683 aa23.31■■□□□ 1.32
SEC13-210ENST00000428626 RPGRIP1LQ68CZ1 1315 aa23.31■■□□□ 1.32
SEC13-210ENST00000428626 NHSL1Q5SYE7 1610 aa23.29■■□□□ 1.32
SEC13-210ENST00000428626 PTCH1Q13635 1447 aa23.28■■□□□ 1.32
SEC13-210ENST00000428626 DDX17Q92841 729 aaKnown RBP23.28■■□□□ 1.32
SEC13-210ENST00000428626 SPATA31A6Q5VVP1 1343 aa23.28■■□□□ 1.32
SEC13-210ENST00000428626 MPHOSPH9Q99550 1183 aa23.27■■□□□ 1.32
SEC13-210ENST00000428626 SPATA31E1Q6ZUB1 1445 aa23.26■■□□□ 1.31
SEC13-210ENST00000428626 PRAG1Q86YV5 1406 aa23.26■■□□□ 1.31
SEC13-210ENST00000428626 ADGRF5Q8IZF2 1346 aa23.25■■□□□ 1.31
SEC13-210ENST00000428626 CCDC144AA2RUR9 1427 aa23.24■■□□□ 1.31
SEC13-210ENST00000428626 SETD5Q9C0A6 1442 aa23.24■■□□□ 1.31
SEC13-210ENST00000428626 C1orf167Q5SNV9 1468 aa23.23■■□□□ 1.31
SEC13-210ENST00000428626 IFT172Q9UG01 1749 aa23.22■■□□□ 1.31
SEC13-210ENST00000428626 RGL3Q3MIN7 710 aa23.22■■□□□ 1.31
SEC13-210ENST00000428626 NUTM2BA6NNL0 878 aaPredicted RBP23.18■■□□□ 1.3
SEC13-210ENST00000428626 NUTM2EB1AL46 878 aaPredicted RBP23.18■■□□□ 1.3
SEC13-210ENST00000428626 MEX3CQ5U5Q3 659 aaKnown RBP23.18■■□□□ 1.3
SEC13-210ENST00000428626 NUTM2AQ8IVF1 878 aaPredicted RBP23.18■■□□□ 1.3
SEC13-210ENST00000428626 ORAI2Q96SN7 254 aa23.18■■□□□ 1.3
SEC13-210ENST00000428626 PNPLA6Q8IY17 1366 aa23.16■■□□□ 1.3
SEC13-210ENST00000428626 LAMC1P11047 1609 aa23.16■■□□□ 1.3
SEC13-210ENST00000428626 LRRC59Q96AG4 307 aaKnown RBP23.15■■□□□ 1.3
SEC13-210ENST00000428626 ANKRD30BQ9BXX2 1392 aa23.14■■□□□ 1.3
SEC13-210ENST00000428626 PIK3C2GO75747 1445 aa23.13■■□□□ 1.29
SEC13-210ENST00000428626 TECPR2O15040 1411 aa23.12■■□□□ 1.29
SEC13-210ENST00000428626 TMEM132EQ6IEE7 984 aa23.12■■□□□ 1.29
SEC13-210ENST00000428626 ZNF772Q68DY9 489 aaPredicted RBP23.11■■□□□ 1.29
SEC13-210ENST00000428626 WAPLQ7Z5K2 1190 aa23.11■■□□□ 1.29
SEC13-210ENST00000428626 STK26Q9P289 416 aa23.11■■□□□ 1.29
SEC13-210ENST00000428626 LRPPRCP42704 1394 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 577.1 ms