RNA–Protein interactions for RNA: ENST00000428253.1

MMP11-202, Transcript of matrix metallopeptidase 11, humanhuman

TSL 4

Gene MMP11, Length 537 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-202ENST00000428253 EID1Q9Y6B2 187 aa26.39■■□□□ 1.82
MMP11-202ENST00000428253 IQGAP1P46940 1657 aa26.38■■□□□ 1.81
MMP11-202ENST00000428253 SPATA31E1Q6ZUB1 1445 aa26.35■■□□□ 1.81
MMP11-202ENST00000428253 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.33■■□□□ 1.81
MMP11-202ENST00000428253 HDGFP51858 240 aaKnown RBP26.32■■□□□ 1.8
MMP11-202ENST00000428253 NEXMIFQ5QGS0 1516 aa26.32■■□□□ 1.8
MMP11-202ENST00000428253 PLEKHG1Q9ULL1 1385 aa26.31■■□□□ 1.8
MMP11-202ENST00000428253 RPGRIP1LQ68CZ1 1315 aa26.28■■□□□ 1.8
MMP11-202ENST00000428253 LTBP4Q8N2S1 1624 aa26.28■■□□□ 1.8
MMP11-202ENST00000428253 ZNF326Q5BKZ1 582 aaKnown RBP26.27■■□□□ 1.8
MMP11-202ENST00000428253 DHX57Q6P158 1386 aaKnown RBP26.27■■□□□ 1.8
MMP11-202ENST00000428253 NUTM2DQ5VT03 806 aaPredicted RBP26.26■■□□□ 1.79
MMP11-202ENST00000428253 ZNF335Q9H4Z2 1342 aaPredicted RBP26.25■■□□□ 1.79
MMP11-202ENST00000428253 PCGF6Q9BYE7 350 aa26.25■■□□□ 1.79
MMP11-202ENST00000428253 PPLO60437 1756 aa26.25■■□□□ 1.79
MMP11-202ENST00000428253 PPP1R15AO75807 674 aaPredicted RBP26.23■■□□□ 1.79
MMP11-202ENST00000428253 ADAMTS13Q76LX8 1427 aa26.22■■□□□ 1.79
MMP11-202ENST00000428253 IFT172Q9UG01 1749 aa26.21■■□□□ 1.79
MMP11-202ENST00000428253 NRXN3Q9Y4C0 1643 aa26.21■■□□□ 1.79
MMP11-202ENST00000428253 SETBP1Q9Y6X0 1596 aa26.2■■□□□ 1.79
MMP11-202ENST00000428253 RGL3Q3MIN7 710 aa26.2■■□□□ 1.78
MMP11-202ENST00000428253 SLC26A8Q96RN1 970 aa26.19■■□□□ 1.78
MMP11-202ENST00000428253 STRCP1A6NGW2 1772 aa26.18■■□□□ 1.78
MMP11-202ENST00000428253 VGFO15240 615 aaPredicted RBP26.18■■□□□ 1.78
MMP11-202ENST00000428253 TBX22Q9Y458 520 aa26.18■■□□□ 1.78
MMP11-202ENST00000428253 DIP2AQ14689 1571 aa26.16■■□□□ 1.78
MMP11-202ENST00000428253 SENP3Q9H4L4 574 aaPredicted RBP26.13■■□□□ 1.77
MMP11-202ENST00000428253 CERKQ8TCT0 537 aa26.12■■□□□ 1.77
MMP11-202ENST00000428253 BCANQ96GW7 911 aa26.12■■□□□ 1.77
MMP11-202ENST00000428253 CPS1P31327 1500 aa26.12■■□□□ 1.77
MMP11-202ENST00000428253 ADGRF5Q8IZF2 1346 aa26.12■■□□□ 1.77
MMP11-202ENST00000428253 NRXN1Q9ULB1 1477 aa26.11■■□□□ 1.77
MMP11-202ENST00000428253 PIK3R4Q99570 1358 aa26.1■■□□□ 1.77
MMP11-202ENST00000428253 CHD2O14647 1828 aaKnown RBP26.1■■□□□ 1.77
MMP11-202ENST00000428253 KCNA6P17658 529 aa26.1■■□□□ 1.77
MMP11-202ENST00000428253 NWD1Q149M9 1564 aa26.1■■□□□ 1.77
MMP11-202ENST00000428253 MYOM2P54296 1465 aa26.1■■□□□ 1.77
MMP11-202ENST00000428253 SETD1AO15047 1707 aaKnown RBP26.09■■□□□ 1.77
MMP11-202ENST00000428253 ALKQ9UM73 1620 aa26.06■■□□□ 1.76
MMP11-202ENST00000428253 PIK3C2GO75747 1445 aa26.06■■□□□ 1.76
MMP11-202ENST00000428253 IQSEC2Q5JU85 1478 aa26.06■■□□□ 1.76
MMP11-202ENST00000428253 SIN3AQ96ST3 1273 aa26.06■■□□□ 1.76
MMP11-202ENST00000428253 METP08581 1390 aa26.06■■□□□ 1.76
MMP11-202ENST00000428253 PTPRUQ92729 1446 aa26.05■■□□□ 1.76
MMP11-202ENST00000428253 LRRC7Q96NW7 1537 aa26.04■■□□□ 1.76
MMP11-202ENST00000428253 STAC3Q96MF2 364 aa26.04■■□□□ 1.76
MMP11-202ENST00000428253 NKTRP30414 1462 aaKnown RBP26.02■■□□□ 1.76
MMP11-202ENST00000428253 DCAF11Q8TEB1 546 aa26.01■■□□□ 1.75
MMP11-202ENST00000428253 XRN1Q8IZH2 1706 aaKnown RBP26■■□□□ 1.75
MMP11-202ENST00000428253 XIRP1Q702N8 1843 aaKnown RBP25.98■■□□□ 1.75
MMP11-202ENST00000428253 C14orf93Q9H972 538 aaKnown RBP25.97■■□□□ 1.75
MMP11-202ENST00000428253 AMOTL2Q9Y2J4 779 aa25.97■■□□□ 1.75
MMP11-202ENST00000428253 PRAG1Q86YV5 1406 aa25.96■■□□□ 1.75
MMP11-202ENST00000428253 ASXL1Q8IXJ9 1541 aa25.95■■□□□ 1.74
MMP11-202ENST00000428253 KDM2AQ9Y2K7 1162 aa25.95■■□□□ 1.74
MMP11-202ENST00000428253 NEUROD1Q13562 356 aa25.94■■□□□ 1.74
MMP11-202ENST00000428253 L3MBTL2Q969R5 705 aa25.94■■□□□ 1.74
MMP11-202ENST00000428253 LAMC1P11047 1609 aa25.93■■□□□ 1.74
MMP11-202ENST00000428253 TMEM94Q12767 1356 aa25.93■■□□□ 1.74
MMP11-202ENST00000428253 CFAP70Q5T0N1 1121 aa25.92■■□□□ 1.74
MMP11-202ENST00000428253 PROSER2Q86WR7 435 aaPredicted RBP25.92■■□□□ 1.74
MMP11-202ENST00000428253 CLSPNQ9HAW4 1339 aa25.9■■□□□ 1.74
MMP11-202ENST00000428253 NCOA3Q9Y6Q9 1424 aa25.89■■□□□ 1.74
MMP11-202ENST00000428253 ADGRB1O14514 1584 aa25.87■■□□□ 1.73
MMP11-202ENST00000428253 LRPPRCP42704 1394 aaKnown RBP25.87■■□□□ 1.73
MMP11-202ENST00000428253 TMEM132EQ6IEE7 984 aa25.87■■□□□ 1.73
MMP11-202ENST00000428253 FBXO41Q8TF61 875 aa25.87■■□□□ 1.73
MMP11-202ENST00000428253 RBM33Q96EV2 1170 aaKnown RBP25.87■■□□□ 1.73
MMP11-202ENST00000428253 TECPR2O15040 1411 aa25.87■■□□□ 1.73
MMP11-202ENST00000428253 PTCH1Q13635 1447 aa25.87■■□□□ 1.73
MMP11-202ENST00000428253 ABCC11Q96J66 1382 aa25.85■■□□□ 1.73
MMP11-202ENST00000428253 ROBO2Q9HCK4 1378 aa25.84■■□□□ 1.73
MMP11-202ENST00000428253 YTHDC2Q9H6S0 1430 aaKnown RBP25.84■■□□□ 1.73
MMP11-202ENST00000428253 KIAA1210Q9ULL0 1709 aa25.83■■□□□ 1.73
MMP11-202ENST00000428253 KNDC1Q76NI1 1749 aa25.83■■□□□ 1.72
MMP11-202ENST00000428253 SIRT1Q96EB6 747 aa25.78■■□□□ 1.72
MMP11-202ENST00000428253 TONSLQ96HA7 1378 aa25.78■■□□□ 1.72
MMP11-202ENST00000428253 UBAP1LF5GYI3 381 aa25.77■■□□□ 1.72
MMP11-202ENST00000428253 STK26Q9P289 416 aa25.77■■□□□ 1.72
MMP11-202ENST00000428253 C19orf44Q9H6X5 657 aa25.76■■□□□ 1.71
MMP11-202ENST00000428253 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.75■■□□□ 1.71
MMP11-202ENST00000428253 DLC1Q96QB1 1528 aa25.75■■□□□ 1.71
MMP11-202ENST00000428253 FAM135BQ49AJ0 1406 aa25.75■■□□□ 1.71
MMP11-202ENST00000428253 MSH6P52701 1360 aa25.75■■□□□ 1.71
MMP11-202ENST00000428253 TOM1O60784 492 aa25.75■■□□□ 1.71
MMP11-202ENST00000428253 ILDR1Q86SU0 546 aaPredicted RBP25.75■■□□□ 1.71
MMP11-202ENST00000428253 ADGRL3Q9HAR2 1447 aa25.74■■□□□ 1.71
MMP11-202ENST00000428253 NBPF1Q3BBV0 1214 aa25.74■■□□□ 1.71
MMP11-202ENST00000428253 NBPF8Q3BBV2 869 aa25.74■■□□□ 1.71
MMP11-202ENST00000428253 CCER1Q8TC90 406 aaPredicted RBP25.74■■□□□ 1.71
MMP11-202ENST00000428253 NALCNQ8IZF0 1738 aa25.73■■□□□ 1.71
MMP11-202ENST00000428253 TRPM1Q7Z4N2 1603 aa25.73■■□□□ 1.71
MMP11-202ENST00000428253 DCCP43146 1447 aa25.72■■□□□ 1.71
MMP11-202ENST00000428253 PLEKHH1Q9ULM0 1364 aa25.71■■□□□ 1.71
MMP11-202ENST00000428253 WAPLQ7Z5K2 1190 aa25.7■■□□□ 1.7
MMP11-202ENST00000428253 TIMELESSQ9UNS1 1208 aa25.7■■□□□ 1.7
MMP11-202ENST00000428253 C14orf37Q86TY3 774 aa25.68■■□□□ 1.7
MMP11-202ENST00000428253 TRAK1Q9UPV9 953 aa25.67■■□□□ 1.7
MMP11-202ENST00000428253 CADPS2Q86UW7 1296 aa25.66■■□□□ 1.7
MMP11-202ENST00000428253 ARHGEF28Q8N1W1 1705 aaKnown RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms