RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 NEUROD1Q13562 356 aa18.68■□□□□ 0.58
CCHCR1-205ENST00000428174 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.68■□□□□ 0.58
CCHCR1-205ENST00000428174 LTKP29376 864 aa18.67■□□□□ 0.58
CCHCR1-205ENST00000428174 RPGRIP1LQ68CZ1 1315 aa18.67■□□□□ 0.58
CCHCR1-205ENST00000428174 CLSPNQ9HAW4 1339 aa18.67■□□□□ 0.58
CCHCR1-205ENST00000428174 NUTM2DQ5VT03 806 aaPredicted RBP18.66■□□□□ 0.58
CCHCR1-205ENST00000428174 ZFYVE9O95405 1425 aa18.66■□□□□ 0.58
CCHCR1-205ENST00000428174 SCAF11Q99590 1463 aaKnown RBP18.65■□□□□ 0.58
CCHCR1-205ENST00000428174 NEURL4Q96JN8 1562 aa18.65■□□□□ 0.58
CCHCR1-205ENST00000428174 PPP1R15AO75807 674 aaPredicted RBP18.65■□□□□ 0.58
CCHCR1-205ENST00000428174 VGFO15240 615 aaPredicted RBP18.62■□□□□ 0.57
CCHCR1-205ENST00000428174 DMRT2Q9Y5R5 561 aa18.62■□□□□ 0.57
CCHCR1-205ENST00000428174 NEXMIFQ5QGS0 1516 aa18.61■□□□□ 0.57
CCHCR1-205ENST00000428174 NPHP4O75161 1426 aaPredicted RBP18.6■□□□□ 0.57
CCHCR1-205ENST00000428174 BCANQ96GW7 911 aa18.6■□□□□ 0.57
CCHCR1-205ENST00000428174 STRCQ7RTU9 1775 aa18.6■□□□□ 0.57
CCHCR1-205ENST00000428174 MED14O60244 1454 aa18.59■□□□□ 0.57
CCHCR1-205ENST00000428174 PLEKHG1Q9ULL1 1385 aa18.59■□□□□ 0.57
CCHCR1-205ENST00000428174 POLR1AO95602 1720 aaPredicted RBP18.58■□□□□ 0.57
CCHCR1-205ENST00000428174 DCAF11Q8TEB1 546 aa18.58■□□□□ 0.56
CCHCR1-205ENST00000428174 SENP3Q9H4L4 574 aaPredicted RBP18.58■□□□□ 0.56
CCHCR1-205ENST00000428174 L3MBTL2Q969R5 705 aa18.57■□□□□ 0.56
CCHCR1-205ENST00000428174 STAC3Q96MF2 364 aa18.57■□□□□ 0.56
CCHCR1-205ENST00000428174 KDM2AQ9Y2K7 1162 aa18.57■□□□□ 0.56
CCHCR1-205ENST00000428174 ADGRF5Q8IZF2 1346 aa18.56■□□□□ 0.56
CCHCR1-205ENST00000428174 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
CCHCR1-205ENST00000428174 PPLO60437 1756 aa18.55■□□□□ 0.56
CCHCR1-205ENST00000428174 MYOM2P54296 1465 aa18.53■□□□□ 0.56
CCHCR1-205ENST00000428174 SLC26A8Q96RN1 970 aa18.53■□□□□ 0.56
CCHCR1-205ENST00000428174 IFT172Q9UG01 1749 aa18.53■□□□□ 0.56
CCHCR1-205ENST00000428174 IQGAP1P46940 1657 aa18.52■□□□□ 0.56
CCHCR1-205ENST00000428174 TBX22Q9Y458 520 aa18.51■□□□□ 0.55
CCHCR1-205ENST00000428174 ADAMTS13Q76LX8 1427 aa18.49■□□□□ 0.55
CCHCR1-205ENST00000428174 TIMELESSQ9UNS1 1208 aa18.49■□□□□ 0.55
CCHCR1-205ENST00000428174 SETBP1Q9Y6X0 1596 aa18.49■□□□□ 0.55
CCHCR1-205ENST00000428174 NRXN1Q9ULB1 1477 aa18.48■□□□□ 0.55
CCHCR1-205ENST00000428174 PIK3C2GO75747 1445 aa18.48■□□□□ 0.55
CCHCR1-205ENST00000428174 C14orf93Q9H972 538 aaKnown RBP18.46■□□□□ 0.55
CCHCR1-205ENST00000428174 NRXN3Q9Y4C0 1643 aa18.45■□□□□ 0.54
CCHCR1-205ENST00000428174 CFAP70Q5T0N1 1121 aa18.45■□□□□ 0.54
CCHCR1-205ENST00000428174 DIP2AQ14689 1571 aa18.45■□□□□ 0.54
CCHCR1-205ENST00000428174 PRAG1Q86YV5 1406 aa18.44■□□□□ 0.54
CCHCR1-205ENST00000428174 ALKQ9UM73 1620 aa18.44■□□□□ 0.54
CCHCR1-205ENST00000428174 ZNF335Q9H4Z2 1342 aaPredicted RBP18.43■□□□□ 0.54
CCHCR1-205ENST00000428174 PIK3R4Q99570 1358 aa18.42■□□□□ 0.54
CCHCR1-205ENST00000428174 METP08581 1390 aa18.42■□□□□ 0.54
CCHCR1-205ENST00000428174 KCNA6P17658 529 aa18.41■□□□□ 0.54
CCHCR1-205ENST00000428174 NBPF8Q3BBV2 869 aa18.4■□□□□ 0.54
CCHCR1-205ENST00000428174 TMEM132EQ6IEE7 984 aa18.4■□□□□ 0.54
CCHCR1-205ENST00000428174 AMOTL2Q9Y2J4 779 aa18.39■□□□□ 0.53
CCHCR1-205ENST00000428174 PTPRUQ92729 1446 aa18.38■□□□□ 0.53
CCHCR1-205ENST00000428174 LAMC1P11047 1609 aa18.38■□□□□ 0.53
CCHCR1-205ENST00000428174 SETD1AO15047 1707 aaKnown RBP18.37■□□□□ 0.53
CCHCR1-205ENST00000428174 STK26Q9P289 416 aa18.36■□□□□ 0.53
CCHCR1-205ENST00000428174 LRPPRCP42704 1394 aaKnown RBP18.35■□□□□ 0.53
CCHCR1-205ENST00000428174 NBPF1Q3BBV0 1214 aa18.35■□□□□ 0.53
CCHCR1-205ENST00000428174 ASXL1Q8IXJ9 1541 aa18.34■□□□□ 0.53
CCHCR1-205ENST00000428174 CHD2O14647 1828 aaKnown RBP18.34■□□□□ 0.53
CCHCR1-205ENST00000428174 KIAA1210Q9ULL0 1709 aa18.34■□□□□ 0.53
CCHCR1-205ENST00000428174 YTHDC2Q9H6S0 1430 aaKnown RBP18.33■□□□□ 0.53
CCHCR1-205ENST00000428174 PROSER2Q86WR7 435 aaPredicted RBP18.33■□□□□ 0.52
CCHCR1-205ENST00000428174 NWD1Q149M9 1564 aa18.33■□□□□ 0.52
CCHCR1-205ENST00000428174 ABCC11Q96J66 1382 aa18.32■□□□□ 0.52
CCHCR1-205ENST00000428174 LTBP4Q8N2S1 1624 aa18.32■□□□□ 0.52
CCHCR1-205ENST00000428174 ADGRB1O14514 1584 aa18.32■□□□□ 0.52
CCHCR1-205ENST00000428174 CPS1P31327 1500 aa18.32■□□□□ 0.52
CCHCR1-205ENST00000428174 ROCK2O75116 1388 aaKnown RBP18.31■□□□□ 0.52
CCHCR1-205ENST00000428174 STRCP1A6NGW2 1772 aa18.31■□□□□ 0.52
CCHCR1-205ENST00000428174 NKTRP30414 1462 aaKnown RBP18.31■□□□□ 0.52
CCHCR1-205ENST00000428174 TRPM1Q7Z4N2 1603 aa18.31■□□□□ 0.52
CCHCR1-205ENST00000428174 TRAK1Q9UPV9 953 aa18.3■□□□□ 0.52
CCHCR1-205ENST00000428174 RALGAPBQ86X10 1494 aa18.3■□□□□ 0.52
CCHCR1-205ENST00000428174 XRN1Q8IZH2 1706 aaKnown RBP18.29■□□□□ 0.52
CCHCR1-205ENST00000428174 ROBO2Q9HCK4 1378 aa18.29■□□□□ 0.52
CCHCR1-205ENST00000428174 SIRT1Q96EB6 747 aa18.28■□□□□ 0.52
CCHCR1-205ENST00000428174 CARD11Q9BXL7 1154 aa18.28■□□□□ 0.52
CCHCR1-205ENST00000428174 TECPR2O15040 1411 aa18.28■□□□□ 0.52
CCHCR1-205ENST00000428174 LRRC7Q96NW7 1537 aa18.28■□□□□ 0.52
CCHCR1-205ENST00000428174 PTCH1Q13635 1447 aa18.27■□□□□ 0.52
CCHCR1-205ENST00000428174 RBM33Q96EV2 1170 aaKnown RBP18.27■□□□□ 0.52
CCHCR1-205ENST00000428174 TMEM94Q12767 1356 aa18.27■□□□□ 0.51
CCHCR1-205ENST00000428174 GPRASP1Q5JY77 1395 aa18.27■□□□□ 0.51
CCHCR1-205ENST00000428174 WAPLQ7Z5K2 1190 aa18.25■□□□□ 0.51
CCHCR1-205ENST00000428174 CERKQ8TCT0 537 aa18.25■□□□□ 0.51
CCHCR1-205ENST00000428174 POGKQ9P215 609 aa18.25■□□□□ 0.51
CCHCR1-205ENST00000428174 KNDC1Q76NI1 1749 aa18.24■□□□□ 0.51
CCHCR1-205ENST00000428174 C14orf37Q86TY3 774 aa18.24■□□□□ 0.51
CCHCR1-205ENST00000428174 PRAM1Q96QH2 718 aa18.24■□□□□ 0.51
CCHCR1-205ENST00000428174 FAM135BQ49AJ0 1406 aa18.23■□□□□ 0.51
CCHCR1-205ENST00000428174 DLC1Q96QB1 1528 aa18.23■□□□□ 0.51
CCHCR1-205ENST00000428174 NCOA3Q9Y6Q9 1424 aa18.23■□□□□ 0.51
CCHCR1-205ENST00000428174 PLEKHH1Q9ULM0 1364 aa18.22■□□□□ 0.51
CCHCR1-205ENST00000428174 ZEB1P37275 1124 aaPredicted RBP18.21■□□□□ 0.51
CCHCR1-205ENST00000428174 SAFB2Q14151 953 aaKnown RBP eCLIP18.21■□□□□ 0.51
CCHCR1-205ENST00000428174 EIF3AQ14152 1382 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-205ENST00000428174 C19orf44Q9H6X5 657 aa18.19■□□□□ 0.5
CCHCR1-205ENST00000428174 MSH6P52701 1360 aa18.18■□□□□ 0.5
CCHCR1-205ENST00000428174 IQSEC2Q5JU85 1478 aa18.18■□□□□ 0.5
CCHCR1-205ENST00000428174 CENPJQ9HC77 1338 aaPredicted RBP18.18■□□□□ 0.5
CCHCR1-205ENST00000428174 ADGRL3Q9HAR2 1447 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms