RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 LRP6O75581 1613 aa16.35■□□□□ 0.21
RDH11-202ENST00000428130 SHPRHQ149N8 1683 aa16.35■□□□□ 0.21
RDH11-202ENST00000428130 GCC2Q8IWJ2 1684 aa16.35■□□□□ 0.21
RDH11-202ENST00000428130 RRP7BPQ9NSQ0 103 aa16.35■□□□□ 0.21
RDH11-202ENST00000428130 SLAIN2Q9P270 581 aa16.34■□□□□ 0.21
RDH11-202ENST00000428130 DAPK1P53355 1430 aa16.33■□□□□ 0.2
RDH11-202ENST00000428130 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.31■□□□□ 0.2
RDH11-202ENST00000428130 AHDC1Q5TGY3 1603 aaPredicted RBP16.31■□□□□ 0.2
RDH11-202ENST00000428130 ZFYVE9O95405 1425 aa16.31■□□□□ 0.2
RDH11-202ENST00000428130 FGD6Q6ZV73 1430 aa16.3■□□□□ 0.2
RDH11-202ENST00000428130 TMEM131LA2VDJ0 1609 aa16.3■□□□□ 0.2
RDH11-202ENST00000428130 UPF1Q92900 1129 aaKnown RBP eCLIP16.29■□□□□ 0.2
RDH11-202ENST00000428130 PLEKHG1Q9ULL1 1385 aa16.28■□□□□ 0.2
RDH11-202ENST00000428130 SPATA31A6Q5VVP1 1343 aa16.28■□□□□ 0.2
RDH11-202ENST00000428130 BCANQ96GW7 911 aa16.27■□□□□ 0.2
RDH11-202ENST00000428130 SLC52A1Q9NWF4 448 aa16.27■□□□□ 0.2
RDH11-202ENST00000428130 NCOA3Q9Y6Q9 1424 aa16.27■□□□□ 0.19
RDH11-202ENST00000428130 DIP2AQ14689 1571 aa16.26■□□□□ 0.19
RDH11-202ENST00000428130 RPRD2Q5VT52 1461 aaKnown RBP16.26■□□□□ 0.19
RDH11-202ENST00000428130 ANKRD30AQ9BXX3 1397 aa16.26■□□□□ 0.19
RDH11-202ENST00000428130 ZNF772Q68DY9 489 aaPredicted RBP16.25■□□□□ 0.19
RDH11-202ENST00000428130 TRIM52Q96A61 297 aa16.25■□□□□ 0.19
RDH11-202ENST00000428130 RIMS2Q9UQ26 1411 aa16.25■□□□□ 0.19
RDH11-202ENST00000428130 MEX3CQ5U5Q3 659 aaKnown RBP16.23■□□□□ 0.19
RDH11-202ENST00000428130 SRCAPQ6ZRS2 3230 aa16.23■□□□□ 0.19
RDH11-202ENST00000428130 ADGRL2O95490 1459 aa16.22■□□□□ 0.19
RDH11-202ENST00000428130 CDK12Q9NYV4 1490 aaPredicted RBP16.22■□□□□ 0.19
RDH11-202ENST00000428130 CHIC2Q9UKJ5 165 aa16.22■□□□□ 0.19
RDH11-202ENST00000428130 ADAMTS13Q76LX8 1427 aa16.21■□□□□ 0.19
RDH11-202ENST00000428130 TBX22Q9Y458 520 aa16.21■□□□□ 0.19
RDH11-202ENST00000428130 NHSL1Q5SYE7 1610 aa16.2■□□□□ 0.18
RDH11-202ENST00000428130 PPP1R15AO75807 674 aaPredicted RBP16.2■□□□□ 0.18
RDH11-202ENST00000428130 E9PCH4 1651 aa16.19■□□□□ 0.18
RDH11-202ENST00000428130 CADPS2Q86UW7 1296 aa16.19■□□□□ 0.18
RDH11-202ENST00000428130 RXRBP28702 533 aa16.18■□□□□ 0.18
RDH11-202ENST00000428130 HDGFP51858 240 aaKnown RBP16.18■□□□□ 0.18
RDH11-202ENST00000428130 C14orf37Q86TY3 774 aa16.18■□□□□ 0.18
RDH11-202ENST00000428130 UNC13BO14795 1591 aa16.17■□□□□ 0.18
RDH11-202ENST00000428130 PIK3R4Q99570 1358 aa16.17■□□□□ 0.18
RDH11-202ENST00000428130 C19orf44Q9H6X5 657 aa16.17■□□□□ 0.18
RDH11-202ENST00000428130 TRPM2O94759 1503 aa16.17■□□□□ 0.18
RDH11-202ENST00000428130 ATF3P18847 181 aa16.16■□□□□ 0.18
RDH11-202ENST00000428130 XRN1Q8IZH2 1706 aaKnown RBP16.16■□□□□ 0.18
RDH11-202ENST00000428130 ASXL1Q8IXJ9 1541 aa16.15■□□□□ 0.18
RDH11-202ENST00000428130 BRINP3Q76B58 766 aa16.15■□□□□ 0.18
RDH11-202ENST00000428130 ANKRD50Q9ULJ7 1429 aa16.15■□□□□ 0.18
RDH11-202ENST00000428130 DCCP43146 1447 aa16.14■□□□□ 0.17
RDH11-202ENST00000428130 PTPRUQ92729 1446 aa16.14■□□□□ 0.17
RDH11-202ENST00000428130 LOC105371045A0A1W2PR82 267 aa16.14■□□□□ 0.17
RDH11-202ENST00000428130 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.14■□□□□ 0.17
RDH11-202ENST00000428130 NRXN3Q9Y4C0 1643 aa16.14■□□□□ 0.17
RDH11-202ENST00000428130 SETD5Q9C0A6 1442 aa16.13■□□□□ 0.17
RDH11-202ENST00000428130 NUTM2BA6NNL0 878 aaPredicted RBP16.13■□□□□ 0.17
RDH11-202ENST00000428130 NUTM2EB1AL46 878 aaPredicted RBP16.13■□□□□ 0.17
RDH11-202ENST00000428130 NUTM2AQ8IVF1 878 aaPredicted RBP16.13■□□□□ 0.17
RDH11-202ENST00000428130 AFF2P51816 1311 aa16.13■□□□□ 0.17
RDH11-202ENST00000428130 RGS12O14924 1447 aa16.12■□□□□ 0.17
RDH11-202ENST00000428130 NUTM2DQ5VT03 806 aaPredicted RBP16.12■□□□□ 0.17
RDH11-202ENST00000428130 IQGAP3Q86VI3 1631 aa16.12■□□□□ 0.17
RDH11-202ENST00000428130 MST1RQ04912 1400 aa16.11■□□□□ 0.17
RDH11-202ENST00000428130 CHGAP10645 457 aaKnown RBP16.1■□□□□ 0.17
RDH11-202ENST00000428130 AMOTL2Q9Y2J4 779 aa16.1■□□□□ 0.17
RDH11-202ENST00000428130 NALCNQ8IZF0 1738 aa16.09■□□□□ 0.17
RDH11-202ENST00000428130 EP400Q96L91 3159 aa16.08■□□□□ 0.17
RDH11-202ENST00000428130 APLP2Q06481 763 aa16.08■□□□□ 0.16
RDH11-202ENST00000428130 SETBP1Q9Y6X0 1596 aa16.08■□□□□ 0.16
RDH11-202ENST00000428130 RBM6P78332 1123 aaKnown RBP16.06■□□□□ 0.16
RDH11-202ENST00000428130 LAMC1P11047 1609 aa16.05■□□□□ 0.16
RDH11-202ENST00000428130 PNPLA6Q8IY17 1366 aa16.05■□□□□ 0.16
RDH11-202ENST00000428130 LRRC59Q96AG4 307 aaKnown RBP16.05■□□□□ 0.16
RDH11-202ENST00000428130 SPHKAPQ2M3C7 1700 aa16.05■□□□□ 0.16
RDH11-202ENST00000428130 C8orf37Q96NL8 207 aa16.04■□□□□ 0.16
RDH11-202ENST00000428130 QTRT2Q9H974 415 aaKnown RBP16.04■□□□□ 0.16
RDH11-202ENST00000428130 ADGRL3Q9HAR2 1447 aa16.02■□□□□ 0.16
RDH11-202ENST00000428130 FAM50AQ14320 339 aaKnown RBP16.02■□□□□ 0.16
RDH11-202ENST00000428130 DDX17Q92841 729 aaKnown RBP16.01■□□□□ 0.15
RDH11-202ENST00000428130 METP08581 1390 aa16■□□□□ 0.15
RDH11-202ENST00000428130 MARF1Q9Y4F3 1742 aaKnown RBP15.99■□□□□ 0.15
RDH11-202ENST00000428130 ATAD2Q6PL18 1390 aa15.99■□□□□ 0.15
RDH11-202ENST00000428130 COL22A1Q8NFW1 1626 aaPredicted RBP15.98■□□□□ 0.15
RDH11-202ENST00000428130 MSH5O43196 834 aa15.98■□□□□ 0.15
RDH11-202ENST00000428130 NGLY1Q96IV0 654 aa15.97■□□□□ 0.15
RDH11-202ENST00000428130 C1orf167Q5SNV9 1468 aa15.97■□□□□ 0.15
RDH11-202ENST00000428130 NEXMIFQ5QGS0 1516 aa15.96■□□□□ 0.15
RDH11-202ENST00000428130 ADAMTS2O95450 1211 aa15.96■□□□□ 0.15
RDH11-202ENST00000428130 ROCK1Q13464 1354 aa15.96■□□□□ 0.15
RDH11-202ENST00000428130 KIF1BO60333 1816 aa15.95■□□□□ 0.14
RDH11-202ENST00000428130 NUP155O75694 1391 aa15.94■□□□□ 0.14
RDH11-202ENST00000428130 CLTCL1P53675 1640 aa15.94■□□□□ 0.14
RDH11-202ENST00000428130 PTCH1Q13635 1447 aa15.94■□□□□ 0.14
RDH11-202ENST00000428130 USP21Q9UK80 565 aa15.93■□□□□ 0.14
RDH11-202ENST00000428130 ATRNO75882 1429 aa15.93■□□□□ 0.14
RDH11-202ENST00000428130 SOS2Q07890 1332 aaPredicted RBP15.93■□□□□ 0.14
RDH11-202ENST00000428130 TRPC5Q9UL62 973 aaPredicted RBP15.92■□□□□ 0.14
RDH11-202ENST00000428130 ZNF326Q5BKZ1 582 aaKnown RBP15.91■□□□□ 0.14
RDH11-202ENST00000428130 FNBP4Q8N3X1 1017 aaPredicted RBP15.9■□□□□ 0.14
RDH11-202ENST00000428130 ZRANB1Q9UGI0 708 aa15.9■□□□□ 0.14
RDH11-202ENST00000428130 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.9■□□□□ 0.14
RDH11-202ENST00000428130 ORAI2Q96SN7 254 aa15.88■□□□□ 0.13
RDH11-202ENST00000428130 MYOM2P54296 1465 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms