RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 NCKAP5LQ9HCH0 1330 aa21.96■■□□□ 1.11
VARS2-203ENST00000428017 SPATA31E1Q6ZUB1 1445 aa21.96■■□□□ 1.11
VARS2-203ENST00000428017 ARHGAP23Q9P227 1491 aa21.96■■□□□ 1.11
VARS2-203ENST00000428017 BCANQ96GW7 911 aa21.94■■□□□ 1.1
VARS2-203ENST00000428017 CLSPNQ9HAW4 1339 aa21.94■■□□□ 1.1
VARS2-203ENST00000428017 SCAF11Q99590 1463 aaKnown RBP21.94■■□□□ 1.1
VARS2-203ENST00000428017 LTKP29376 864 aa21.93■■□□□ 1.1
VARS2-203ENST00000428017 NUTM2DQ5VT03 806 aaPredicted RBP21.93■■□□□ 1.1
VARS2-203ENST00000428017 DMRT2Q9Y5R5 561 aa21.93■■□□□ 1.1
VARS2-203ENST00000428017 ZFYVE9O95405 1425 aa21.92■■□□□ 1.1
VARS2-203ENST00000428017 NEURL4Q96JN8 1562 aa21.91■■□□□ 1.1
VARS2-203ENST00000428017 VGFO15240 615 aaPredicted RBP21.91■■□□□ 1.1
VARS2-203ENST00000428017 NPHP4O75161 1426 aaPredicted RBP21.89■■□□□ 1.09
VARS2-203ENST00000428017 MYO5BQ9ULV0 1848 aa21.88■■□□□ 1.09
VARS2-203ENST00000428017 DCAF11Q8TEB1 546 aa21.87■■□□□ 1.09
VARS2-203ENST00000428017 NEXMIFQ5QGS0 1516 aa21.86■■□□□ 1.09
VARS2-203ENST00000428017 SENP3Q9H4L4 574 aaPredicted RBP21.86■■□□□ 1.09
VARS2-203ENST00000428017 TONSLQ96HA7 1378 aa21.86■■□□□ 1.09
VARS2-203ENST00000428017 PLEKHG1Q9ULL1 1385 aa21.86■■□□□ 1.09
VARS2-203ENST00000428017 STAC3Q96MF2 364 aa21.85■■□□□ 1.09
VARS2-203ENST00000428017 MED14O60244 1454 aa21.84■■□□□ 1.09
VARS2-203ENST00000428017 KDM2AQ9Y2K7 1162 aa21.84■■□□□ 1.09
VARS2-203ENST00000428017 POLR1AO95602 1720 aaPredicted RBP21.83■■□□□ 1.09
VARS2-203ENST00000428017 STRCQ7RTU9 1775 aa21.82■■□□□ 1.08
VARS2-203ENST00000428017 L3MBTL2Q969R5 705 aa21.81■■□□□ 1.08
VARS2-203ENST00000428017 ADGRF5Q8IZF2 1346 aa21.8■■□□□ 1.08
VARS2-203ENST00000428017 SLC26A8Q96RN1 970 aa21.79■■□□□ 1.08
VARS2-203ENST00000428017 MYOM2P54296 1465 aa21.78■■□□□ 1.08
VARS2-203ENST00000428017 IQGAP1P46940 1657 aa21.78■■□□□ 1.08
VARS2-203ENST00000428017 PPLO60437 1756 aa21.77■■□□□ 1.08
VARS2-203ENST00000428017 TIMELESSQ9UNS1 1208 aa21.75■■□□□ 1.07
VARS2-203ENST00000428017 TBX22Q9Y458 520 aa21.75■■□□□ 1.07
VARS2-203ENST00000428017 SETBP1Q9Y6X0 1596 aa21.74■■□□□ 1.07
VARS2-203ENST00000428017 IFT172Q9UG01 1749 aa21.73■■□□□ 1.07
VARS2-203ENST00000428017 PIK3C2GO75747 1445 aa21.72■■□□□ 1.07
VARS2-203ENST00000428017 ADAMTS13Q76LX8 1427 aa21.72■■□□□ 1.07
VARS2-203ENST00000428017 NRXN1Q9ULB1 1477 aa21.71■■□□□ 1.07
VARS2-203ENST00000428017 DIP2AQ14689 1571 aa21.7■■□□□ 1.06
VARS2-203ENST00000428017 C14orf93Q9H972 538 aaKnown RBP21.69■■□□□ 1.06
VARS2-203ENST00000428017 CFAP70Q5T0N1 1121 aa21.68■■□□□ 1.06
VARS2-203ENST00000428017 PRAG1Q86YV5 1406 aa21.67■■□□□ 1.06
VARS2-203ENST00000428017 PIK3R4Q99570 1358 aa21.67■■□□□ 1.06
VARS2-203ENST00000428017 ALKQ9UM73 1620 aa21.66■■□□□ 1.06
VARS2-203ENST00000428017 ZNF335Q9H4Z2 1342 aaPredicted RBP21.66■■□□□ 1.06
VARS2-203ENST00000428017 NRXN3Q9Y4C0 1643 aa21.66■■□□□ 1.06
VARS2-203ENST00000428017 METP08581 1390 aa21.65■■□□□ 1.06
VARS2-203ENST00000428017 KCNA6P17658 529 aa21.65■■□□□ 1.06
VARS2-203ENST00000428017 TMEM132EQ6IEE7 984 aa21.62■■□□□ 1.05
VARS2-203ENST00000428017 AMOTL2Q9Y2J4 779 aa21.62■■□□□ 1.05
VARS2-203ENST00000428017 LAMC1P11047 1609 aa21.62■■□□□ 1.05
VARS2-203ENST00000428017 NBPF8Q3BBV2 869 aa21.59■■□□□ 1.05
VARS2-203ENST00000428017 STK26Q9P289 416 aa21.59■■□□□ 1.05
VARS2-203ENST00000428017 PROSER2Q86WR7 435 aaPredicted RBP21.57■■□□□ 1.04
VARS2-203ENST00000428017 ROCK2O75116 1388 aaKnown RBP21.57■■□□□ 1.04
VARS2-203ENST00000428017 PTPRUQ92729 1446 aa21.56■■□□□ 1.04
VARS2-203ENST00000428017 LRPPRCP42704 1394 aaKnown RBP21.56■■□□□ 1.04
VARS2-203ENST00000428017 YTHDC2Q9H6S0 1430 aaKnown RBP21.55■■□□□ 1.04
VARS2-203ENST00000428017 CPS1P31327 1500 aa21.55■■□□□ 1.04
VARS2-203ENST00000428017 NBPF1Q3BBV0 1214 aa21.55■■□□□ 1.04
VARS2-203ENST00000428017 NKTRP30414 1462 aaKnown RBP21.55■■□□□ 1.04
VARS2-203ENST00000428017 NWD1Q149M9 1564 aa21.54■■□□□ 1.04
VARS2-203ENST00000428017 SETD1AO15047 1707 aaKnown RBP21.54■■□□□ 1.04
VARS2-203ENST00000428017 ASXL1Q8IXJ9 1541 aa21.53■■□□□ 1.04
VARS2-203ENST00000428017 KIAA1210Q9ULL0 1709 aa21.52■■□□□ 1.04
VARS2-203ENST00000428017 ABCC11Q96J66 1382 aa21.52■■□□□ 1.04
VARS2-203ENST00000428017 TRAK1Q9UPV9 953 aa21.52■■□□□ 1.04
VARS2-203ENST00000428017 ADGRB1O14514 1584 aa21.52■■□□□ 1.04
VARS2-203ENST00000428017 C14orf37Q86TY3 774 aa21.51■■□□□ 1.03
VARS2-203ENST00000428017 CARD11Q9BXL7 1154 aa21.51■■□□□ 1.03
VARS2-203ENST00000428017 RALGAPBQ86X10 1494 aa21.51■■□□□ 1.03
VARS2-203ENST00000428017 LTBP4Q8N2S1 1624 aa21.51■■□□□ 1.03
VARS2-203ENST00000428017 CHD2O14647 1828 aaKnown RBP21.5■■□□□ 1.03
VARS2-203ENST00000428017 PTCH1Q13635 1447 aa21.49■■□□□ 1.03
VARS2-203ENST00000428017 TRPM1Q7Z4N2 1603 aa21.49■■□□□ 1.03
VARS2-203ENST00000428017 POGKQ9P215 609 aa21.49■■□□□ 1.03
VARS2-203ENST00000428017 XRN1Q8IZH2 1706 aaKnown RBP21.49■■□□□ 1.03
VARS2-203ENST00000428017 TMEM94Q12767 1356 aa21.48■■□□□ 1.03
VARS2-203ENST00000428017 ROBO2Q9HCK4 1378 aa21.48■■□□□ 1.03
VARS2-203ENST00000428017 TECPR2O15040 1411 aa21.48■■□□□ 1.03
VARS2-203ENST00000428017 RBM33Q96EV2 1170 aaKnown RBP21.48■■□□□ 1.03
VARS2-203ENST00000428017 LRRC7Q96NW7 1537 aa21.47■■□□□ 1.03
VARS2-203ENST00000428017 SIRT1Q96EB6 747 aa21.47■■□□□ 1.03
VARS2-203ENST00000428017 CERKQ8TCT0 537 aa21.46■■□□□ 1.03
VARS2-203ENST00000428017 PRAM1Q96QH2 718 aa21.46■■□□□ 1.03
VARS2-203ENST00000428017 GPRASP1Q5JY77 1395 aa21.46■■□□□ 1.03
VARS2-203ENST00000428017 STRCP1A6NGW2 1772 aa21.46■■□□□ 1.03
VARS2-203ENST00000428017 FAM135BQ49AJ0 1406 aa21.45■■□□□ 1.02
VARS2-203ENST00000428017 ZEB1P37275 1124 aaPredicted RBP21.44■■□□□ 1.02
VARS2-203ENST00000428017 WAPLQ7Z5K2 1190 aa21.44■■□□□ 1.02
VARS2-203ENST00000428017 EIF3AQ14152 1382 aaKnown RBP21.44■■□□□ 1.02
VARS2-203ENST00000428017 NCOA3Q9Y6Q9 1424 aa21.43■■□□□ 1.02
VARS2-203ENST00000428017 DLC1Q96QB1 1528 aa21.43■■□□□ 1.02
VARS2-203ENST00000428017 MSH6P52701 1360 aa21.42■■□□□ 1.02
VARS2-203ENST00000428017 SAFB2Q14151 953 aaKnown RBP eCLIP21.42■■□□□ 1.02
VARS2-203ENST00000428017 KNDC1Q76NI1 1749 aa21.41■■□□□ 1.02
VARS2-203ENST00000428017 PLEKHH1Q9ULM0 1364 aa21.4■■□□□ 1.02
VARS2-203ENST00000428017 C19orf44Q9H6X5 657 aa21.4■■□□□ 1.02
VARS2-203ENST00000428017 IQSEC2Q5JU85 1478 aa21.39■■□□□ 1.01
VARS2-203ENST00000428017 CENPJQ9HC77 1338 aaPredicted RBP21.38■■□□□ 1.01
VARS2-203ENST00000428017 ATF3P18847 181 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms