RNA–Protein interactions for RNA: ENST00000427398.1

LINC01874-201, Transcript of long intergenic non-protein coding RNA 1874, humanhuman

TSL 2 BASIC

Gene LINC01874, Length 510 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01874-201ENST00000427398 ROBO1Q9Y6N7 1651 aa17.28■□□□□ 0.36
LINC01874-201ENST00000427398 NKTRP30414 1462 aaKnown RBP17.27■□□□□ 0.36
LINC01874-201ENST00000427398 TMEM94Q12767 1356 aa17.27■□□□□ 0.35
LINC01874-201ENST00000427398 SLC52A1Q9NWF4 448 aa17.26■□□□□ 0.35
LINC01874-201ENST00000427398 ZFYVE9O95405 1425 aa17.26■□□□□ 0.35
LINC01874-201ENST00000427398 SLC26A8Q96RN1 970 aa17.25■□□□□ 0.35
LINC01874-201ENST00000427398 RIMS2Q9UQ26 1411 aa17.23■□□□□ 0.35
LINC01874-201ENST00000427398 KCNA6P17658 529 aa17.23■□□□□ 0.35
LINC01874-201ENST00000427398 FAM135BQ49AJ0 1406 aa17.21■□□□□ 0.35
LINC01874-201ENST00000427398 ROCK1Q13464 1354 aa17.21■□□□□ 0.35
LINC01874-201ENST00000427398 PLEKHG1Q9ULL1 1385 aa17.21■□□□□ 0.35
LINC01874-201ENST00000427398 PROSER2Q86WR7 435 aaPredicted RBP17.2■□□□□ 0.34
LINC01874-201ENST00000427398 RBM33Q96EV2 1170 aaKnown RBP17.2■□□□□ 0.34
LINC01874-201ENST00000427398 SPHKAPQ2M3C7 1700 aa17.2■□□□□ 0.34
LINC01874-201ENST00000427398 PHLPP1O60346 1717 aa17.18■□□□□ 0.34
LINC01874-201ENST00000427398 BCANQ96GW7 911 aa17.18■□□□□ 0.34
LINC01874-201ENST00000427398 DIP2AQ14689 1571 aa17.18■□□□□ 0.34
LINC01874-201ENST00000427398 PPP1R15AO75807 674 aaPredicted RBP17.16■□□□□ 0.34
LINC01874-201ENST00000427398 MSH6P52701 1360 aa17.15■□□□□ 0.34
LINC01874-201ENST00000427398 ADAMTS13Q76LX8 1427 aa17.14■□□□□ 0.33
LINC01874-201ENST00000427398 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.14■□□□□ 0.33
LINC01874-201ENST00000427398 CHGAP10645 457 aaKnown RBP17.14■□□□□ 0.33
LINC01874-201ENST00000427398 NRXN3Q9Y4C0 1643 aa17.13■□□□□ 0.33
LINC01874-201ENST00000427398 NUP155O75694 1391 aa17.13■□□□□ 0.33
LINC01874-201ENST00000427398 COL16A1Q07092 1604 aaPredicted RBP17.12■□□□□ 0.33
LINC01874-201ENST00000427398 RGS17Q9UGC6 210 aaPredicted RBP17.12■□□□□ 0.33
LINC01874-201ENST00000427398 TRPM2O94759 1503 aa17.11■□□□□ 0.33
LINC01874-201ENST00000427398 ITGAEP38570 1179 aa17.11■□□□□ 0.33
LINC01874-201ENST00000427398 HDGFP51858 240 aaKnown RBP17.11■□□□□ 0.33
LINC01874-201ENST00000427398 NUTM2DQ5VT03 806 aaPredicted RBP17.11■□□□□ 0.33
LINC01874-201ENST00000427398 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.1■□□□□ 0.33
LINC01874-201ENST00000427398 TBX22Q9Y458 520 aa17.1■□□□□ 0.33
LINC01874-201ENST00000427398 XRN1Q8IZH2 1706 aaKnown RBP17.1■□□□□ 0.33
LINC01874-201ENST00000427398 PPARGC1BQ86YN6 1023 aaKnown RBP17.09■□□□□ 0.33
LINC01874-201ENST00000427398 KIF1BO60333 1816 aa17.08■□□□□ 0.33
LINC01874-201ENST00000427398 SETBP1Q9Y6X0 1596 aa17.07■□□□□ 0.32
LINC01874-201ENST00000427398 NCOA3Q9Y6Q9 1424 aa17.07■□□□□ 0.32
LINC01874-201ENST00000427398 PIK3R4Q99570 1358 aa17.07■□□□□ 0.32
LINC01874-201ENST00000427398 CLTCL1P53675 1640 aa17.07■□□□□ 0.32
LINC01874-201ENST00000427398 SLAIN2Q9P270 581 aa17.06■□□□□ 0.32
LINC01874-201ENST00000427398 PTPRUQ92729 1446 aa17.05■□□□□ 0.32
LINC01874-201ENST00000427398 SETD1AO15047 1707 aaKnown RBP17.05■□□□□ 0.32
LINC01874-201ENST00000427398 SHPRHQ149N8 1683 aa17.05■□□□□ 0.32
LINC01874-201ENST00000427398 AHDC1Q5TGY3 1603 aaPredicted RBP17.05■□□□□ 0.32
LINC01874-201ENST00000427398 JCADQ9P266 1359 aa17.02■□□□□ 0.32
LINC01874-201ENST00000427398 NEXMIFQ5QGS0 1516 aa17.02■□□□□ 0.32
LINC01874-201ENST00000427398 C14orf37Q86TY3 774 aa17.02■□□□□ 0.32
LINC01874-201ENST00000427398 RRBP1Q9P2E9 1410 aaKnown RBP17.02■□□□□ 0.31
LINC01874-201ENST00000427398 POTEAQ6S8J7 498 aa17.01■□□□□ 0.31
LINC01874-201ENST00000427398 NALCNQ8IZF0 1738 aa17.01■□□□□ 0.31
LINC01874-201ENST00000427398 LRP6O75581 1613 aa16.99■□□□□ 0.31
LINC01874-201ENST00000427398 NHSL1Q5SYE7 1610 aa16.99■□□□□ 0.31
LINC01874-201ENST00000427398 CADPS2Q86UW7 1296 aa16.99■□□□□ 0.31
LINC01874-201ENST00000427398 AMOTL2Q9Y2J4 779 aa16.99■□□□□ 0.31
LINC01874-201ENST00000427398 DCCP43146 1447 aa16.98■□□□□ 0.31
LINC01874-201ENST00000427398 NAIPQ13075 1403 aa16.98■□□□□ 0.31
LINC01874-201ENST00000427398 C19orf44Q9H6X5 657 aa16.98■□□□□ 0.31
LINC01874-201ENST00000427398 ATF3P18847 181 aa16.97■□□□□ 0.31
LINC01874-201ENST00000427398 ASXL1Q8IXJ9 1541 aa16.96■□□□□ 0.31
LINC01874-201ENST00000427398 ZNF326Q5BKZ1 582 aaKnown RBP16.96■□□□□ 0.31
LINC01874-201ENST00000427398 PPLO60437 1756 aa16.95■□□□□ 0.3
LINC01874-201ENST00000427398 METP08581 1390 aa16.95■□□□□ 0.3
LINC01874-201ENST00000427398 MST1RQ04912 1400 aa16.94■□□□□ 0.3
LINC01874-201ENST00000427398 FOXD1Q16676 465 aa16.93■□□□□ 0.3
LINC01874-201ENST00000427398 SPATA31A6Q5VVP1 1343 aa16.93■□□□□ 0.3
LINC01874-201ENST00000427398 BRINP3Q76B58 766 aa16.92■□□□□ 0.3
LINC01874-201ENST00000427398 ADGRL3Q9HAR2 1447 aa16.92■□□□□ 0.3
LINC01874-201ENST00000427398 HFM1A2PYH4 1435 aa16.9■□□□□ 0.3
LINC01874-201ENST00000427398 MEX3CQ5U5Q3 659 aaKnown RBP16.87■□□□□ 0.29
LINC01874-201ENST00000427398 IFT172Q9UG01 1749 aa16.87■□□□□ 0.29
LINC01874-201ENST00000427398 PTCH1Q13635 1447 aa16.87■□□□□ 0.29
LINC01874-201ENST00000427398 SETD5Q9C0A6 1442 aa16.87■□□□□ 0.29
LINC01874-201ENST00000427398 LAMC1P11047 1609 aa16.86■□□□□ 0.29
LINC01874-201ENST00000427398 TRIM52Q96A61 297 aa16.84■□□□□ 0.29
LINC01874-201ENST00000427398 PRAG1Q86YV5 1406 aa16.84■□□□□ 0.29
LINC01874-201ENST00000427398 C1orf167Q5SNV9 1468 aa16.82■□□□□ 0.28
LINC01874-201ENST00000427398 ZNF772Q68DY9 489 aaPredicted RBP16.82■□□□□ 0.28
LINC01874-201ENST00000427398 ROBO2Q9HCK4 1378 aa16.81■□□□□ 0.28
LINC01874-201ENST00000427398 NUTM2BA6NNL0 878 aaPredicted RBP16.81■□□□□ 0.28
LINC01874-201ENST00000427398 NUTM2EB1AL46 878 aaPredicted RBP16.81■□□□□ 0.28
LINC01874-201ENST00000427398 NUTM2AQ8IVF1 878 aaPredicted RBP16.81■□□□□ 0.28
LINC01874-201ENST00000427398 DDX17Q92841 729 aaKnown RBP16.81■□□□□ 0.28
LINC01874-201ENST00000427398 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
LINC01874-201ENST00000427398 PNPLA6Q8IY17 1366 aa16.8■□□□□ 0.28
LINC01874-201ENST00000427398 VGFO15240 615 aaPredicted RBP16.8■□□□□ 0.28
LINC01874-201ENST00000427398 KNDC1Q76NI1 1749 aa16.79■□□□□ 0.28
LINC01874-201ENST00000427398 RPGRIP1LQ68CZ1 1315 aa16.78■□□□□ 0.28
LINC01874-201ENST00000427398 CDC42BPGQ6DT37 1551 aa16.78■□□□□ 0.28
LINC01874-201ENST00000427398 AFF2P51816 1311 aa16.77■□□□□ 0.28
LINC01874-201ENST00000427398 LRRC59Q96AG4 307 aaKnown RBP16.77■□□□□ 0.28
LINC01874-201ENST00000427398 CDK12Q9NYV4 1490 aaPredicted RBP16.76■□□□□ 0.27
LINC01874-201ENST00000427398 COL22A1Q8NFW1 1626 aaPredicted RBP16.76■□□□□ 0.27
LINC01874-201ENST00000427398 MARF1Q9Y4F3 1742 aaKnown RBP16.76■□□□□ 0.27
LINC01874-201ENST00000427398 CCDC144AA2RUR9 1427 aa16.74■□□□□ 0.27
LINC01874-201ENST00000427398 SPATA31E1Q6ZUB1 1445 aa16.74■□□□□ 0.27
LINC01874-201ENST00000427398 RXRBP28702 533 aa16.73■□□□□ 0.27
LINC01874-201ENST00000427398 ORAI2Q96SN7 254 aa16.73■□□□□ 0.27
LINC01874-201ENST00000427398 C8orf37Q96NL8 207 aa16.72■□□□□ 0.27
LINC01874-201ENST00000427398 FMN2Q9NZ56 1722 aa16.72■□□□□ 0.27
LINC01874-201ENST00000427398 SOS2Q07890 1332 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms